FFCP PHASE1:Hg19::chr2:3391595..3391620,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:3391595..3391620,+
|short_description=p5@TRAPPC12
|description=CAGE_peak_5_at_TRAPPC12_5end
|association_with_transcript=-277bp_to_ENST00000411973_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51112 | |EntrezGene=51112 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24284 | |HGNC=24284 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-277bp_to_ENST00000411973_5end | |||
|cluster_id=chr2:3391595..3391620,+ | |||
|description=CAGE_peak_5_at_TRAPPC12_5end | |||
|id=chr2:3391595..3391620,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002521;1.96e-18;3!CL:0000097;2.45e-11;5!CL:0002567;7.17e-09;3!CL:0000136;2.23e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002521,2.81e-18,3;CL:0000097,2.78e-11,5;CL:0002028,2.78e-11,5;CL:0002567,5.92e-09,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.03e-07;1!UBERON:0006242;5.44e-07;1!UBERON:0005425;5.44e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;1.96e-18;3!UBERON:0002072;2.87e-11;5!UBERON:0000941;5.44e-07;1!UBERON:0001301;5.44e-07;1!UBERON:0001785;5.44e-07;1!UBERON:0002464;5.44e-07;1!UBERON:0004904;5.44e-07;1!UBERON:0001021;5.44e-07;1!UBERON:0001013;7.44e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.81e-18,3;UBERON:0002072,3.55e-11,5;UBERON:0001301,3.60e-07,1;UBERON:0000941,5.14e-07,1;UBERON:0001785,5.14e-07,1;UBERON:0002464,5.14e-07,1;UBERON:0004904,5.14e-07,1;UBERON:0001021,5.14e-07,1;UBERON:0003902,5.14e-07,1;UBERON:0005425,5.14e-07,1;UBERON:0007023,5.94e-07,114;UBERON:0005103,6.36e-07,8;UBERON:0000083,6.36e-07,8;UBERON:0009201,6.36e-07,8;UBERON:0006553,6.36e-07,8;UBERON:0003074,6.36e-07,8;UBERON:0003060,6.36e-07,8;UBERON:0001013,9.41e-07,14 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.422863212287913,1.0007329835313,0,0.872338524100369,2.53299878168311,2.52687949370732,1.04474251279935,0,0,0,0,0,0.331397375727916,0,0,0,0,0.123121058076788,0.204000691244253,0,0,0,0.125542639594803,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0.217010870715852,0.447830948479849,0.32389366601898,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0.306083892370903,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0.22465726229299,0,0.16072558669708,0,0.79566670879636,0.182664153764634,1.75996244461323,0.546138611262131,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0.196709770113833,0,0,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0,0,0,0.506039384039006,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.221729397462564,0,0.392937226493138,0.364295288292542,0,0,0,0.664789802594326,0.238490624305342,0,0,0,0,0,0,0.419499436209906,0.275118041940067,0,0,0,0.33472061276467,0,0,0.488124115096339,0.367663080345869,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0,0.183201743930407,0,0,0,0,0.633152558322899,0.132409180813219,0,0,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0,0,0.576175924479999,0,0.624320153660641,0,0.149448680551801,0,0,0,0,0.122834317311768,0.206651562351531,0,0.989067717114227,0,0,0.336672227908132,0,0,0.438977620880838,0,0.751190294532984,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0,0,0,0.286804595389004,0.243947412259191,0,0.464775771478074,0.207322110030741,0,0.72995471815166,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,2.94848165003288,0.590789906681404,0.441463099414651,0,0,0.329250856225877,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0.790204397959275,0.858486162094873,0,0.234004265139238,0.594524649154913,0,0.335964256397719,0,0,0,0,0,0.264145302039678,3.31724984865235,1.29707958075265,2.27236380167484,0.063497894292169,1.52795370223311,5.86087236050235,0,0.308482478109971,0,0.285826432630578,0.112131084345361,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0.215627574859517,0.256686072559497,0.508189248444927,0,0,0,0.637938751653163,2.24702107184155,0,0.828831026872071,0,0,0,0,0.356857977594324,0,0,1.20378439891088,2.27407504055985,0,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0,0.431428401637234,0.320182673410333,0.909382714338778,0,0,0,0,0.561320188866147,0.384417447767103,0,0.321707842287215,0,0,0.710246901252508,0.410635780069046,0.519254429183621,0.116210378459959,0.966875596732978,0.200506470303285,0.276242966807689,0.114814448164607,0.182091168006717,1.70461739447251,0,0,0,0,0.211103257785751,0,0.170093705276516,0,1.54227252690289,0,1.00337954770971,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0.650060246036521,0,0.48335359146061,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0.330569830721956,0,0,0.910420027699949,0,0,0,0.308033580176089,0,0.869932992075073,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0,0,0,0.235624804691373,0,0,0,0,0,0,0.136499911407986,0.848432591722276,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0,0.0982490410131212,0.35667105148125,0,0.211107635297664,0,0,0.349934720244983,0.288666338176536,0.670302275535787,0,0.564862804660675,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0.111443384277478,0,0.23874448473769,0.296964680832639,0,0,0,0.222617410045812,0.16480387422676,0,0.19924798825107,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0,0,0.394573622547734,0,0,1.93866549219044,0.278304294485554,0,0.260427761085233,0,1.44999915086959,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,1.23120413606075,0,0.23056390438806,0.448788222048861,0.108647371922008,0.31900115973192,0.641183153813036,0,0,0.156980256395025,0,0,0,0.335643173951685,0,0.158936578980379,0.421996129056054,0,0,0,0,0.973033209536731,1.22206028986725,0,0.370691816839509,0,0,0,0.468528891450678,0,0,0.242780379534093,0,0,0,0.31593289814244,0.901940516486955,0.207376382794494,0,0,0.627865836814451,0,0.284609546029793,0,0.347119476670262,0.0979923974143777,0,1.57254001417827,0,0,0.0730893170861856,0,0.387956065953678,0,0.451961481561065,0,0,0,0,0,1.49417096317547,0.19980960958213,0.144090417154106,0,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| ||
|short_description=p5@TRAPPC12 | |||
}} | }} |
Latest revision as of 00:17, 17 September 2015
Short description: | p5@TRAPPC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRAPPC12_5end |
Coexpression cluster: | NA |
Association with transcript: | -277bp_to_ENST00000411973_5end |
EntrezGene: | TRAPPC12 |
HGNC: | 24284 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
subcutaneous fat cell | 2.81e-18 | 3 |
mast cell | 2.78e-11 | 5 |
basophil mast progenitor cell | 2.78e-11 | 5 |
light melanocyte | 5.92e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.81e-18 | 3 |
hypodermis | 3.55e-11 | 5 |
epididymis | 3.60e-07 | 1 |
cranial nerve II | 5.14e-07 | 1 |
cranial nerve | 5.14e-07 | 1 |
nerve trunk | 5.14e-07 | 1 |
nerve connecting eye with brain | 5.14e-07 | 1 |
nerve | 5.14e-07 | 1 |
retinal neural layer | 5.14e-07 | 1 |
presumptive neural retina | 5.14e-07 | 1 |
adult organism | 5.94e-07 | 114 |
mesonephric epithelium | 6.36e-07 | 8 |
mesonephric tubule | 6.36e-07 | 8 |
nephric duct | 6.36e-07 | 8 |
renal duct | 6.36e-07 | 8 |
mesonephric duct | 6.36e-07 | 8 |
pronephric duct | 6.36e-07 | 8 |
adipose tissue | 9.41e-07 | 14 |