FFCP PHASE1:Hg19::chr2:70167296..70167306,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:70167296..70167306,+
|short_description=p3@MXD1
|description=CAGE_peak_3_at_MXD1_5end
|association_with_transcript=480bp_to_BC036402_5end
|EntrezGene=4084...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4084 | |EntrezGene=4084 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6761 | |HGNC=6761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=480bp_to_BC036402_5end | |||
|cluster_id=chr2:70167296..70167306,+ | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_3_at_MXD1_5end | |||
|id=chr2:70167296..70167306,+ | |||
|ontology_enrichment_celltype=CL:0000766!3.52e-28!76;CL:0002057!3.87e-26!42;CL:0000860!6.29e-25!45;CL:0002009!9.42e-25!65;CL:0002194!9.17e-24!63;CL:0000576!9.17e-24!63;CL:0000040!9.17e-24!63;CL:0000559!9.17e-24!63;CL:0000839!1.01e-23!70;CL:0000557!3.20e-23!71;CL:0000738!1.61e-22!140;CL:0000763!1.81e-20!112;CL:0000049!1.81e-20!112;CL:0002031!1.03e-18!124;CL:0000037!2.27e-18!172;CL:0000566!2.27e-18!172;CL:0002087!7.65e-18!119;CL:0002032!1.70e-17!165;CL:0000837!1.70e-17!165;CL:0000988!2.17e-16!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.27e-30;33!CL:0002057;1.27e-30;33!CL:0000473;6.90e-29;39!CL:0000234;6.90e-29;39!CL:0000576;1.35e-24;48!CL:0000766;5.28e-19;69!CL:0000763;1.53e-09;100!CL:0000094;1.81e-09;8!CL:0002087;1.17e-08;104!CL:0000738;1.46e-07;136!CL:0000081;2.03e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.06e-45,48;CL:0000234,6.06e-45,48;CL:0000766,7.23e-45,72;CL:0002009,1.72e-43,61;CL:0002194,6.91e-42,59;CL:0000576,6.91e-42,59;CL:0000040,6.91e-42,59;CL:0000559,6.91e-42,59;CL:0000860,1.59e-40,42;CL:0002057,1.59e-40,42;CL:0000557,1.60e-37,67;CL:0000839,1.21e-36,66;CL:0000738,2.16e-31,136;CL:0000763,2.58e-29,108;CL:0000049,2.58e-29,108;CL:0002087,7.83e-28,115;CL:0002031,1.22e-26,120;CL:0000037,8.78e-25,168;CL:0002032,1.17e-23,161;CL:0000837,1.17e-23,161;CL:0000988,1.38e-22,177;CL:0000094,1.84e-09,8;CL:0002393,4.22e-08,9;CL:0002397,4.22e-08,9;CL:0000081,2.41e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;6.18e-29;42!CL:0000049;1.49e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.64e-26!102;UBERON:0003061!5.64e-26!102;UBERON:0002193!1.45e-24!112;UBERON:0002371!4.55e-20!80;UBERON:0001474!5.29e-18!86;UBERON:0002405!7.03e-18!115;UBERON:0004765!9.80e-13!101;UBERON:0001434!9.80e-13!101;UBERON:0000178!7.94e-07!15;UBERON:0000179!7.94e-07!15;UBERON:0000463!7.94e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.19e-08;15!UBERON:0000179;1.19e-08;15!UBERON:0000463;1.19e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.99e-40,98;UBERON:0003061,1.99e-40,98;UBERON:0002193,1.37e-38,108;UBERON:0002371,6.84e-34,76;UBERON:0001474,1.01e-30,82;UBERON:0002405,1.15e-30,93;UBERON:0004765,9.07e-27,90;UBERON:0001434,7.68e-22,100;UBERON:0003081,6.17e-10,203;UBERON:0000178,1.03e-08,15;UBERON:0000179,1.03e-08,15;UBERON:0000463,1.03e-08,15;UBERON:0002204,1.14e-07,167 | |||
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| ||
|short_description=p3@MXD1 | |||
}} | }} |
Latest revision as of 05:12, 18 September 2015
Short description: | p3@MXD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MXD1_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | 480bp_to_BC036402_5end |
EntrezGene: | MXD1 |
HGNC: | 6761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 6.06e-45 | 48 |
phagocyte | 6.06e-45 | 48 |
myeloid leukocyte | 7.23e-45 | 72 |
macrophage dendritic cell progenitor | 1.72e-43 | 61 |
monopoietic cell | 6.91e-42 | 59 |
monocyte | 6.91e-42 | 59 |
monoblast | 6.91e-42 | 59 |
promonocyte | 6.91e-42 | 59 |
classical monocyte | 1.59e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-40 | 42 |
granulocyte monocyte progenitor cell | 1.60e-37 | 67 |
myeloid lineage restricted progenitor cell | 1.21e-36 | 66 |
leukocyte | 2.16e-31 | 136 |
myeloid cell | 2.58e-29 | 108 |
common myeloid progenitor | 2.58e-29 | 108 |
nongranular leukocyte | 7.83e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.22e-26 | 120 |
hematopoietic stem cell | 8.78e-25 | 168 |
hematopoietic oligopotent progenitor cell | 1.17e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.17e-23 | 161 |
hematopoietic cell | 1.38e-22 | 177 |
granulocyte | 1.84e-09 | 8 |
intermediate monocyte | 4.22e-08 | 9 |
CD14-positive, CD16-positive monocyte | 4.22e-08 | 9 |
blood cell | 2.41e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.99e-40 | 98 |
blood island | 1.99e-40 | 98 |
hemolymphoid system | 1.37e-38 | 108 |
bone marrow | 6.84e-34 | 76 |
bone element | 1.01e-30 | 82 |
immune system | 1.15e-30 | 93 |
skeletal element | 9.07e-27 | 90 |
skeletal system | 7.68e-22 | 100 |
lateral plate mesoderm | 6.17e-10 | 203 |
blood | 1.03e-08 | 15 |
haemolymphatic fluid | 1.03e-08 | 15 |
organism substance | 1.03e-08 | 15 |
musculoskeletal system | 1.14e-07 | 167 |