FFCP PHASE1:Hg19::chr2:73143312..73143323,+: Difference between revisions
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|id=chr2:73143312..73143323,+
|short_description=p6@EMX1
|description=CAGE_peak_6_at_EMX1_5end
|association_with_transcript=-65bp_to_uc002sim.1_5end
|EntrezGene=20...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2016 | |EntrezGene=2016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3340 | |HGNC=3340 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-65bp_to_uc002sim.1_5end | |||
|cluster_id=chr2:73143312..73143323,+ | |||
|coexpression_cluster_id=C148 | |||
|description=CAGE_peak_6_at_EMX1_5end | |||
|id=chr2:73143312..73143323,+ | |||
|ontology_enrichment_celltype=CL:0000945!1.80e-07!24;CL:0000826!1.80e-07!24 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.05e-34;2!UBERON:0003918;2.08e-27;10!UBERON:0007687;2.08e-27;10!UBERON:0003104;5.96e-10;31 | |||
|ontology_enrichment_disease=DOID:630!7.01e-09!1;DOID:0050177!7.01e-09!1;DOID:0050427!7.01e-09!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!6.50e-09!1;UBERON:0001882!2.13e-08!1;UBERON:0005403!2.13e-08!1;UBERON:0002902!3.06e-08!1;UBERON:0009899!3.06e-08!1;UBERON:0002022!4.07e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001301;4.66e-66;1!UBERON:0006947;4.09e-23;3!UBERON:0004054;4.09e-23;3!UBERON:0005904;1.03e-17;4!UBERON:0002113;3.75e-12;24!UBERON:0011143;3.75e-12;24!UBERON:0000489;2.96e-10;29!UBERON:0006554;5.96e-10;30!UBERON:0001008;5.96e-10;30!UBERON:0000058;6.56e-08;10!UBERON:0003135;2.63e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,4.66e-66,1;UBERON:0002113,8.76e-24,26;UBERON:0003918,8.76e-24,26;UBERON:0011143,8.76e-24,26;UBERON:0005095,8.76e-24,26;UBERON:0007687,8.76e-24,26;UBERON:0006947,4.09e-23,3;UBERON:0004054,4.09e-23,3;UBERON:0000489,3.79e-20,31;UBERON:0005904,1.03e-17,4;UBERON:0006554,1.10e-13,47;UBERON:0001008,2.00e-13,48;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0003103,8.58e-10,68;UBERON:0005103,1.47e-09,8;UBERON:0000083,1.47e-09,8;UBERON:0009201,1.47e-09,8;UBERON:0006553,1.47e-09,8;UBERON:0003074,1.47e-09,8;UBERON:0003060,1.47e-09,8;UBERON:0000080,1.21e-08,9;UBERON:0002120,1.21e-08,9;UBERON:0004875,1.21e-08,9;UBERON:0005721,1.21e-08,9;UBERON:0005754,1.21e-08,9;UBERON:0007297,1.21e-08,9;UBERON:0003135,2.63e-07,11;UBERON:0004876,2.63e-07,11;UBERON:0005177,6.45e-07,101;UBERON:0003887,8.38e-07,12 | |||
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|short_description=p6@EMX1 | |||
}} | }} |
Latest revision as of 08:48, 18 September 2015
Short description: | p6@EMX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EMX1_5end |
Coexpression cluster: | C148_kidney_small_epididymis_pancreas_serous_duodenum_temporal |
Association with transcript: | -65bp_to_uc002sim.1_5end |
EntrezGene: | EMX1 |
HGNC: | 3340 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epididymis | 4.66e-66 | 1 |
kidney | 8.76e-24 | 26 |
kidney mesenchyme | 8.76e-24 | 26 |
upper urinary tract | 8.76e-24 | 26 |
kidney rudiment | 8.76e-24 | 26 |
kidney field | 8.76e-24 | 26 |
male genital duct | 4.09e-23 | 3 |
internal male genitalia | 4.09e-23 | 3 |
cavitated compound organ | 3.79e-20 | 31 |
duct of male reproductive system | 1.03e-17 | 4 |
urinary system structure | 1.10e-13 | 47 |
renal system | 2.00e-13 | 48 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
compound organ | 8.58e-10 | 68 |
mesonephric epithelium | 1.47e-09 | 8 |
mesonephric tubule | 1.47e-09 | 8 |
nephric duct | 1.47e-09 | 8 |
renal duct | 1.47e-09 | 8 |
mesonephric duct | 1.47e-09 | 8 |
pronephric duct | 1.47e-09 | 8 |
mesonephros | 1.21e-08 | 9 |
pronephros | 1.21e-08 | 9 |
nephrogenic cord | 1.21e-08 | 9 |
pronephric mesoderm | 1.21e-08 | 9 |
rostral part of nephrogenic cord | 1.21e-08 | 9 |
presumptive pronephric mesoderm | 1.21e-08 | 9 |
male reproductive organ | 2.63e-07 | 11 |
urogenital ridge | 2.63e-07 | 11 |
trunk region element | 6.45e-07 | 101 |
intraembryonic coelom | 8.38e-07 | 12 |