FFCP PHASE1:Hg19::chr3:121786075..121786081,-: Difference between revisions
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|id=chr3:121786075..121786081,-
|short_description=p@chr3:121786075..121786081,-
|description=CAGE_peak_at_chr3:121786075..121786081,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:121786075..121786081,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr3:121786075..121786081,- | |||
|id=chr3:121786075..121786081,- | |||
|ontology_enrichment_celltype=CL:0002057!1.06e-90!42;CL:0000860!7.24e-84!45;CL:0002009!3.09e-62!65;CL:0002194!2.08e-61!63;CL:0000576!2.08e-61!63;CL:0000040!2.08e-61!63;CL:0000559!2.08e-61!63;CL:0000766!6.15e-60!76;CL:0000557!5.06e-56!71;CL:0000839!3.68e-54!70;CL:0002087!2.44e-51!119;CL:0000763!2.88e-51!112;CL:0000049!2.88e-51!112;CL:0000738!3.58e-51!140;CL:0000037!2.08e-49!172;CL:0000566!2.08e-49!172;CL:0000988!2.95e-49!182;CL:0002032!1.33e-46!165;CL:0000837!1.33e-46!165;CL:0002031!1.21e-44!124;CL:0000134!3.87e-17!358;CL:0002393!7.98e-17!9;CL:0002397!7.98e-17!9;CL:0002320!1.68e-16!365;CL:0000219!2.97e-14!390;CL:0000048!6.16e-13!430;CL:0000723!1.56e-12!436;CL:0000034!5.17e-12!444;CL:0000080!7.41e-10!6;CL:0000767!5.01e-08!3;CL:0000842!6.42e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-124;33!CL:0002057;1.02e-124;33!CL:0000473;2.68e-87;39!CL:0000234;2.68e-87;39!CL:0000576;2.45e-65;48!CL:0000766;4.17e-33;69!CL:0000763;2.33e-16;100!CL:0002087;2.59e-15;104!CL:0000738;1.13e-10;136!CL:0000988;5.05e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.32e-116,42;CL:0002057,1.32e-116,42;CL:0000473,1.89e-101,48;CL:0000234,1.89e-101,48;CL:0002194,3.21e-80,59;CL:0000576,3.21e-80,59;CL:0000040,3.21e-80,59;CL:0000559,3.21e-80,59;CL:0002009,1.77e-77,61;CL:0000839,2.42e-71,66;CL:0000557,3.18e-70,67;CL:0000766,4.35e-65,72;CL:0002087,2.13e-45,115;CL:0000763,2.97e-45,108;CL:0000049,2.97e-45,108;CL:0002031,2.90e-40,120;CL:0000738,1.11e-37,136;CL:0000037,7.30e-32,168;CL:0002032,4.36e-31,161;CL:0000837,4.36e-31,161;CL:0000988,5.36e-30,177;CL:0000134,1.89e-12,354;CL:0002320,4.17e-12,361;CL:0000219,6.81e-11,386;CL:0000048,2.09e-09,427;CL:0000723,3.35e-09,433;CL:0000034,6.18e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.64e-82;42!CL:0000049;6.55e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;1.44e-07;1!DOID:0070004;1.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,1.99e-07,1;DOID:0070004,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!4.25e-51!80;UBERON:0002390!4.96e-50!102;UBERON:0003061!4.96e-50!102;UBERON:0001474!1.03e-46!86;UBERON:0002193!2.15e-44!112;UBERON:0004765!5.08e-38!101;UBERON:0001434!5.08e-38!101;UBERON:0002405!1.40e-33!115;UBERON:0002204!2.28e-18!167;UBERON:0003081!1.02e-17!216;UBERON:0002384!1.25e-15!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.67e-66,76;UBERON:0001474,6.21e-61,82;UBERON:0004765,3.76e-55,90;UBERON:0002390,4.91e-54,98;UBERON:0003061,4.91e-54,98;UBERON:0002405,3.09e-53,93;UBERON:0001434,3.29e-49,100;UBERON:0002193,1.25e-48,108;UBERON:0002204,1.32e-27,167;UBERON:0003081,1.20e-23,203;UBERON:0000926,2.01e-13,315;UBERON:0004120,2.01e-13,315;UBERON:0006603,2.01e-13,315;UBERON:0002384,1.23e-11,371 | |||
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| ||
|short_description=p@chr3:121786075..121786081,- | |||
}} | }} |
Latest revision as of 14:59, 29 July 2015
Short description: | p@chr3:121786075..121786081, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:121786075..121786081, - |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.32e-116 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.32e-116 | 42 |
defensive cell | 1.89e-101 | 48 |
phagocyte | 1.89e-101 | 48 |
monopoietic cell | 3.21e-80 | 59 |
monocyte | 3.21e-80 | 59 |
monoblast | 3.21e-80 | 59 |
promonocyte | 3.21e-80 | 59 |
macrophage dendritic cell progenitor | 1.77e-77 | 61 |
myeloid lineage restricted progenitor cell | 2.42e-71 | 66 |
granulocyte monocyte progenitor cell | 3.18e-70 | 67 |
myeloid leukocyte | 4.35e-65 | 72 |
nongranular leukocyte | 2.13e-45 | 115 |
myeloid cell | 2.97e-45 | 108 |
common myeloid progenitor | 2.97e-45 | 108 |
hematopoietic lineage restricted progenitor cell | 2.90e-40 | 120 |
leukocyte | 1.11e-37 | 136 |
hematopoietic stem cell | 7.30e-32 | 168 |
hematopoietic oligopotent progenitor cell | 4.36e-31 | 161 |
hematopoietic multipotent progenitor cell | 4.36e-31 | 161 |
hematopoietic cell | 5.36e-30 | 177 |
mesenchymal cell | 1.89e-12 | 354 |
connective tissue cell | 4.17e-12 | 361 |
motile cell | 6.81e-11 | 386 |
multi fate stem cell | 2.09e-09 | 427 |
somatic stem cell | 3.35e-09 | 433 |
stem cell | 6.18e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.67e-66 | 76 |
bone element | 6.21e-61 | 82 |
skeletal element | 3.76e-55 | 90 |
hematopoietic system | 4.91e-54 | 98 |
blood island | 4.91e-54 | 98 |
immune system | 3.09e-53 | 93 |
skeletal system | 3.29e-49 | 100 |
hemolymphoid system | 1.25e-48 | 108 |
musculoskeletal system | 1.32e-27 | 167 |
lateral plate mesoderm | 1.20e-23 | 203 |
mesoderm | 2.01e-13 | 315 |
mesoderm-derived structure | 2.01e-13 | 315 |
presumptive mesoderm | 2.01e-13 | 315 |
connective tissue | 1.23e-11 | 371 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 1.99e-07 | 1 |
myeloma | 1.99e-07 | 1 |