FFCP PHASE1:Hg19::chr3:23847514..23847545,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:23847514..23847545,+
|short_description=p2@UBE2E1
|description=CAGE_peak_2_at_UBE2E1_5end
|association_with_transcript=39bp_to_ENST00000481622_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7324 | |EntrezGene=7324 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12477 | |HGNC=12477 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=39bp_to_ENST00000481622_5end | |||
|cluster_id=chr3:23847514..23847545,+ | |||
|description=CAGE_peak_2_at_UBE2E1_5end | |||
|id=chr3:23847514..23847545,+ | |||
|ontology_enrichment_celltype=CL:0002009!6.94e-23!65;CL:0000037!7.05e-22!172;CL:0000566!7.05e-22!172;CL:0002194!1.05e-21!63;CL:0000576!1.05e-21!63;CL:0000040!1.05e-21!63;CL:0000559!1.05e-21!63;CL:0000763!1.79e-21!112;CL:0000049!1.79e-21!112;CL:0002032!2.41e-20!165;CL:0000837!2.41e-20!165;CL:0000766!2.26e-19!76;CL:0002087!5.38e-19!119;CL:0000988!5.77e-19!182;CL:0000557!1.23e-18!71;CL:0000738!2.19e-18!140;CL:0002057!1.12e-17!42;CL:0000839!6.05e-16!70;CL:0000048!1.87e-15!430;CL:0002031!1.13e-14!124;CL:0000860!2.79e-14!45;CL:0000723!4.11e-14!436;CL:0000034!1.51e-13!444;CL:0002320!3.42e-10!365;CL:0000134!4.99e-10!358;CL:0002371!1.96e-08!591;CL:0000219!5.22e-08!390;CL:0002139!5.11e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.67e-16;39!CL:0000234;2.67e-16;39!CL:0000860;7.09e-16;33!CL:0002057;7.09e-16;33!CL:0000576;1.83e-13;48!CL:0000766;1.56e-09;69!CL:0000763;6.72e-09;100!CL:0002139;5.66e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.13e-26,61;CL:0002194,3.65e-25,59;CL:0000576,3.65e-25,59;CL:0000040,3.65e-25,59;CL:0000559,3.65e-25,59;CL:0000763,9.26e-24,108;CL:0000049,9.26e-24,108;CL:0000037,1.23e-23,168;CL:0000766,3.72e-22,72;CL:0002032,4.59e-22,161;CL:0000837,4.59e-22,161;CL:0000557,1.76e-21,67;CL:0000473,2.90e-21,48;CL:0000234,2.90e-21,48;CL:0002087,5.10e-21,115;CL:0000738,3.61e-20,136;CL:0000988,3.88e-20,177;CL:0000839,1.62e-18,66;CL:0000860,1.12e-17,42;CL:0002057,1.12e-17,42;CL:0002031,2.48e-16,120;CL:0000048,5.02e-16,427;CL:0000723,1.18e-14,433;CL:0000034,4.50e-14,441;CL:0002320,7.98e-11,361;CL:0000134,1.17e-10,354;CL:0000219,1.53e-08,386;CL:0002139,5.11e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;6.92e-13;42!CL:0000049;2.00e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.49e-18!112;UBERON:0002390!6.84e-17!102;UBERON:0003061!6.84e-17!102;UBERON:0002204!2.25e-16!167;UBERON:0002371!3.69e-16!80;UBERON:0001474!1.04e-15!86;UBERON:0003081!1.37e-14!216;UBERON:0004765!4.52e-14!101;UBERON:0001434!4.52e-14!101;UBERON:0002405!1.43e-11!115;UBERON:0002384!4.68e-09!375;UBERON:0004535!3.58e-08!110;UBERON:0001009!1.68e-07!113;UBERON:0000055!4.33e-07!69 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.26e-20,108;UBERON:0002405,6.65e-20,93;UBERON:0002390,5.85e-19,98;UBERON:0003061,5.85e-19,98;UBERON:0004765,6.80e-19,90;UBERON:0002371,1.59e-18,76;UBERON:0001474,6.47e-18,82;UBERON:0002204,8.40e-18,167;UBERON:0003081,2.80e-17,203;UBERON:0001434,4.24e-16,100;UBERON:0000926,1.10e-10,315;UBERON:0004120,1.10e-10,315;UBERON:0006603,1.10e-10,315;UBERON:0002384,1.22e-09,371;UBERON:0004535,4.73e-08,109;UBERON:0001009,2.20e-07,112;UBERON:0000055,5.72e-07,68 | |||
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| ||
|short_description=p2@UBE2E1 | |||
}} | }} |
Latest revision as of 19:36, 17 September 2015
Short description: | p2@UBE2E1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_UBE2E1_5end |
Coexpression cluster: | NA |
Association with transcript: | 39bp_to_ENST00000481622_5end |
EntrezGene: | UBE2E1 |
HGNC: | 12477 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.13e-26 | 61 |
monopoietic cell | 3.65e-25 | 59 |
monocyte | 3.65e-25 | 59 |
monoblast | 3.65e-25 | 59 |
promonocyte | 3.65e-25 | 59 |
myeloid cell | 9.26e-24 | 108 |
common myeloid progenitor | 9.26e-24 | 108 |
hematopoietic stem cell | 1.23e-23 | 168 |
myeloid leukocyte | 3.72e-22 | 72 |
hematopoietic oligopotent progenitor cell | 4.59e-22 | 161 |
hematopoietic multipotent progenitor cell | 4.59e-22 | 161 |
granulocyte monocyte progenitor cell | 1.76e-21 | 67 |
defensive cell | 2.90e-21 | 48 |
phagocyte | 2.90e-21 | 48 |
nongranular leukocyte | 5.10e-21 | 115 |
leukocyte | 3.61e-20 | 136 |
hematopoietic cell | 3.88e-20 | 177 |
myeloid lineage restricted progenitor cell | 1.62e-18 | 66 |
classical monocyte | 1.12e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.12e-17 | 42 |
hematopoietic lineage restricted progenitor cell | 2.48e-16 | 120 |
multi fate stem cell | 5.02e-16 | 427 |
somatic stem cell | 1.18e-14 | 433 |
stem cell | 4.50e-14 | 441 |
connective tissue cell | 7.98e-11 | 361 |
mesenchymal cell | 1.17e-10 | 354 |
motile cell | 1.53e-08 | 386 |
endothelial cell of vascular tree | 5.11e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.26e-20 | 108 |
immune system | 6.65e-20 | 93 |
hematopoietic system | 5.85e-19 | 98 |
blood island | 5.85e-19 | 98 |
skeletal element | 6.80e-19 | 90 |
bone marrow | 1.59e-18 | 76 |
bone element | 6.47e-18 | 82 |
musculoskeletal system | 8.40e-18 | 167 |
lateral plate mesoderm | 2.80e-17 | 203 |
skeletal system | 4.24e-16 | 100 |
mesoderm | 1.10e-10 | 315 |
mesoderm-derived structure | 1.10e-10 | 315 |
presumptive mesoderm | 1.10e-10 | 315 |
connective tissue | 1.22e-09 | 371 |
cardiovascular system | 4.73e-08 | 109 |
circulatory system | 2.20e-07 | 112 |
vessel | 5.72e-07 | 68 |