FFCP PHASE1:Hg19::chr4:109000758..109000770,-: Difference between revisions
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|id=chr4:109000758..109000770,-
|short_description=p49@LEF1
|description=CAGE_peak_49_at_LEF1_5end
|association_with_transcript=0bp_to_uc003hyw.1_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003hyw.1_5end | |||
|cluster_id=chr4:109000758..109000770,- | |||
|description=CAGE_peak_49_at_LEF1_5end | |||
|id=chr4:109000758..109000770,- | |||
|ontology_enrichment_celltype=CL:0000542!2.01e-22!53;CL:0000051!2.01e-22!53;CL:0000838!1.10e-20!52;CL:0000084!2.43e-20!25;CL:0000827!2.43e-20!25;CL:0000791!6.88e-17!18;CL:0000789!6.88e-17!18;CL:0002420!6.88e-17!18;CL:0002419!6.88e-17!18;CL:0000790!6.88e-17!18;CL:0000624!1.76e-14!6;CL:0000817!2.57e-10!3;CL:0000623!3.12e-10!3;CL:0000825!3.12e-10!3;CL:0002087!7.69e-10!119;CL:0000738!2.05e-08!140;CL:0000785!2.54e-07!2;CL:0000955!2.54e-07!2;CL:0000818!2.54e-07!2;CL:0000954!2.54e-07!2;CL:0000816!2.54e-07!2;CL:0000625!2.83e-07!11;CL:0002253!3.29e-07!2;CL:0000037!3.64e-07!172;CL:0000566!3.64e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000815;5.69e-21;2!CL:0000792;5.69e-21;2!CL:0002677;5.69e-21;2!CL:0000084;4.73e-15;25!CL:0000898;1.83e-14;3!CL:0000624;6.78e-08;6!CL:0000542;1.96e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,5.70e-21,2;CL:0000792,5.70e-21,2;CL:0002677,5.70e-21,2;CL:0000084,5.08e-15,25;CL:0000827,5.08e-15,25;CL:0000898,1.83e-14,3;CL:0000624,6.78e-08,6;CL:0000838,1.23e-07,52;CL:0000542,1.66e-07,53;CL:0000051,1.66e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.96e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.00e-08!4;UBERON:0005058!1.00e-08!4;UBERON:0009113!1.00e-08!4;UBERON:0003295!1.00e-08!4;UBERON:0005562!1.00e-08!4;UBERON:0004177!5.52e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.21e-40;1!UBERON:0002370;3.44e-21;2!UBERON:0005058;3.44e-21;2!UBERON:0009113;3.44e-21;2!UBERON:0004177;2.63e-09;5!UBERON:0005057;2.63e-09;5!UBERON:0002405;6.92e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,1.48e-40,1;UBERON:0002370,2.53e-11,4;UBERON:0005058,2.53e-11,4;UBERON:0009113,2.53e-11,4;UBERON:0003295,2.53e-11,4;UBERON:0005562,2.53e-11,4;UBERON:0003351,5.54e-08,6;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
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| ||
|short_description=p49@LEF1 | |||
}} | }} |
Latest revision as of 08:15, 20 September 2015
Short description: | p49@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_49_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc003hyw.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 5.70e-21 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.70e-21 | 2 |
naive regulatory T cell | 5.70e-21 | 2 |
T cell | 5.08e-15 | 25 |
pro-T cell | 5.08e-15 | 25 |
naive T cell | 1.83e-14 | 3 |
CD4-positive, alpha-beta T cell | 6.78e-08 | 6 |
lymphoid lineage restricted progenitor cell | 1.23e-07 | 52 |
lymphocyte | 1.66e-07 | 53 |
common lymphoid progenitor | 1.66e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
lymph node | 1.48e-40 | 1 |
thymus | 2.53e-11 | 4 |
hemolymphoid system gland | 2.53e-11 | 4 |
thymic region | 2.53e-11 | 4 |
pharyngeal gland | 2.53e-11 | 4 |
thymus primordium | 2.53e-11 | 4 |
pharyngeal epithelium | 5.54e-08 | 6 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |