FFCP PHASE1:Hg19::chr4:164909713..164909733,-: Difference between revisions
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|id=chr4:164909713..164909733,-
|short_description=p10@MARCH1
|description=CAGE_peak_10_at_MARCH1_5end
|association_with_transcript=339bp_to_ENST00000510696_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55016 | |EntrezGene=55016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26077 | |HGNC=26077 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=339bp_to_ENST00000510696_5end | |||
|cluster_id=chr4:164909713..164909733,- | |||
|coexpression_cluster_id=C40 | |||
|description=CAGE_peak_10_at_MARCH1_5end | |||
|id=chr4:164909713..164909733,- | |||
|ontology_enrichment_celltype=CL:0000242!1.92e-12!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;2.18e-38;3 | |||
|ontology_enrichment_disease=DOID:6193!4.85e-07!1;DOID:8552!5.45e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.43e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002780!2.96e-31!41;UBERON:0001890!2.96e-31!41;UBERON:0006240!2.96e-31!41;UBERON:0003080!1.89e-30!42;UBERON:0003056!2.72e-29!61;UBERON:0002346!9.87e-26!90;UBERON:0002791!3.02e-25!33;UBERON:0001049!1.28e-24!57;UBERON:0005068!1.28e-24!57;UBERON:0006241!1.28e-24!57;UBERON:0007135!1.28e-24!57;UBERON:0003075!1.68e-24!86;UBERON:0007284!1.68e-24!86;UBERON:0001893!1.88e-24!34;UBERON:0002616!1.11e-23!59;UBERON:0001869!3.19e-22!32;UBERON:0000955!4.06e-22!69;UBERON:0006238!4.06e-22!69;UBERON:0005743!1.08e-21!86;UBERON:0002020!8.07e-21!34;UBERON:0003528!8.07e-21!34;UBERON:0001017!2.12e-20!82;UBERON:0000073!2.76e-19!94;UBERON:0001016!2.76e-19!94;UBERON:0002619!1.63e-18!22;UBERON:0000956!3.30e-16!25;UBERON:0000203!3.30e-16!25;UBERON:0003296!2.77e-14!4;UBERON:0010133!2.77e-14!4;UBERON:0000033!5.09e-14!123;UBERON:0000924!1.06e-13!173;UBERON:0006601!1.06e-13!173;UBERON:0001905!2.29e-13!2;UBERON:0002757!2.29e-13!2;UBERON:0010134!2.29e-13!2;UBERON:0002784!2.29e-13!2;UBERON:0005408!2.29e-13!2;UBERON:0001899!2.29e-13!2;UBERON:0000153!3.49e-13!129;UBERON:0007811!3.49e-13!129;UBERON:0004121!9.52e-13!169;UBERON:0001954!1.62e-12!2;UBERON:0003022!1.62e-12!2;UBERON:0002421!1.62e-12!2;UBERON:0002600!1.62e-12!2;UBERON:0001950!2.24e-12!20;UBERON:0007023!3.38e-12!115;UBERON:0002021!5.36e-11!5;UBERON:0001894!2.34e-08!7;UBERON:0006222!2.34e-08!7;UBERON:0005383!2.45e-08!3;UBERON:0005382!2.45e-08!3;UBERON:0009663!1.10e-07!7;UBERON:0001874!6.12e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.02e-57;2!UBERON:0002757;2.02e-57;2!UBERON:0010134;2.02e-57;2!UBERON:0005408;2.02e-57;2!UBERON:0001899;2.02e-57;2!UBERON:0003296;2.37e-29;4!UBERON:0010133;2.37e-29;4!UBERON:0002784;2.37e-29;4!UBERON:0000966;1.61e-23;5!UBERON:0005388;1.61e-23;5!UBERON:0001802;1.61e-23;5!UBERON:0001894;2.90e-17;7!UBERON:0000970;1.69e-13;20!UBERON:0002104;6.85e-13;21!UBERON:0000020;7.80e-12;23!UBERON:0001032;2.27e-11;24!UBERON:0004456;2.27e-11;24!UBERON:0000019;6.38e-07;19!UBERON:0000047;6.38e-07;19!UBERON:0004088;6.38e-07;19!UBERON:0010230;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.02e-57,2;UBERON:0002757,2.02e-57,2;UBERON:0010134,2.02e-57,2;UBERON:0005408,2.02e-57,2;UBERON:0001899,2.02e-57,2;UBERON:0003296,2.37e-29,4;UBERON:0010133,2.37e-29,4;UBERON:0002784,2.37e-29,4;UBERON:0000966,8.63e-20,6;UBERON:0005388,8.63e-20,6;UBERON:0001802,8.63e-20,6;UBERON:0001894,2.90e-17,7;UBERON:0006222,2.90e-17,7;UBERON:0000970,6.85e-13,21;UBERON:0002104,6.85e-13,21;UBERON:0000020,2.27e-11,24;UBERON:0001032,2.27e-11,24;UBERON:0004456,2.27e-11,24;UBERON:0003056,8.30e-08,61 | |||
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|short_description=p10@MARCH1 | |||
}} | }} |
Latest revision as of 13:36, 16 September 2015
Short description: | p10@MARCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MARCH1_5end |
Coexpression cluster: | C40_eye_retina_Lens_pineal_tongue_retinoblastoma_small |
Association with transcript: | 339bp_to_ENST00000510696_5end |
EntrezGene: | MARCH1 |
HGNC: | 26077 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 2.02e-57 | 2 |
regional part of epithalamus | 2.02e-57 | 2 |
secretory circumventricular organ | 2.02e-57 | 2 |
circumventricular organ | 2.02e-57 | 2 |
epithalamus | 2.02e-57 | 2 |
gland of diencephalon | 2.37e-29 | 4 |
neuroendocrine gland | 2.37e-29 | 4 |
regional part of diencephalon | 2.37e-29 | 4 |
retina | 8.63e-20 | 6 |
photoreceptor array | 8.63e-20 | 6 |
posterior segment of eyeball | 8.63e-20 | 6 |
diencephalon | 2.90e-17 | 7 |
future diencephalon | 2.90e-17 | 7 |
eye | 6.85e-13 | 21 |
visual system | 6.85e-13 | 21 |
sense organ | 2.27e-11 | 24 |
sensory system | 2.27e-11 | 24 |
entire sense organ system | 2.27e-11 | 24 |
pre-chordal neural plate | 8.30e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.43e-08 | 4 |