FFCP PHASE1:Hg19::chr4:41937131..41937211,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:41937131..41937211,+
|short_description=p1@TMEM33
|description=CAGE_peak_1_at_TMEM33_5end
|association_with_transcript=0bp_to_ENST00000264452,ENST000003250...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55161 | |EntrezGene=55161 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25541 | |HGNC=25541 | ||
|TSSclassifier=strong | |||
|UniProt=P57088,D6RAA6 | |UniProt=P57088,D6RAA6 | ||
|association_with_transcript=0bp_to_ENST00000264452,ENST00000325094,ENST00000504986,ENST00000508448,ENST00000513702,NM_018126,uc003gwi.2,uc010ifw.2_5end | |||
|cluster_id=chr4:41937131..41937211,+ | |||
|description=CAGE_peak_1_at_TMEM33_5end | |||
|id=chr4:41937131..41937211,+ | |||
|ontology_enrichment_celltype=CL:0002194!6.21e-16!63;CL:0000576!6.21e-16!63;CL:0000040!6.21e-16!63;CL:0000559!6.21e-16!63;CL:0002009!4.29e-15!65;CL:0000557!1.63e-13!71;CL:0000766!4.39e-13!76;CL:0000839!1.30e-12!70;CL:0000860!1.83e-12!45;CL:0002057!4.48e-11!42;CL:0000763!5.68e-11!112;CL:0000049!5.68e-11!112;CL:0000223!7.34e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.61e-12;39!CL:0000234;1.61e-12;39!CL:0000860;2.01e-11;33!CL:0002057;2.01e-11;33!CL:0000576;2.19e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.74e-15,59;CL:0000576,3.74e-15,59;CL:0000040,3.74e-15,59;CL:0000559,3.74e-15,59;CL:0000473,2.53e-14,48;CL:0000234,2.53e-14,48;CL:0002009,2.61e-14,61;CL:0000557,9.91e-13,67;CL:0000766,2.65e-12,72;CL:0000839,7.77e-12,66;CL:0000860,4.48e-11,42;CL:0002057,4.48e-11,42;CL:0000763,2.99e-10,108;CL:0000049,2.99e-10,108;CL:0000223,1.89e-07,58;CL:0002076,8.84e-07,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.80e-08;42 | |||
|ontology_enrichment_disease=DOID:14566!3.26e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.26e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001474!7.61e-12!86;UBERON:0004765!7.06e-11!101;UBERON:0001434!7.06e-11!101;UBERON:0000062!7.74e-11!511;UBERON:0002371!8.44e-11!80;UBERON:0000480!1.30e-08!626;UBERON:0000467!1.32e-08!625;UBERON:0000922!1.41e-08!612;UBERON:0000923!2.31e-08!604;UBERON:0005291!2.31e-08!604;UBERON:0006598!2.31e-08!604;UBERON:0002532!2.31e-08!604;UBERON:0002050!3.69e-08!605;UBERON:0005423!3.69e-08!605;UBERON:0002390!1.12e-07!102;UBERON:0003061!1.12e-07!102;UBERON:0002405!2.18e-07!115;UBERON:0000073!3.06e-07!94;UBERON:0001016!3.06e-07!94 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,4.38e-11,82;UBERON:0002371,4.71e-10,76;UBERON:0004765,1.87e-09,90;UBERON:0001434,9.47e-09,100;UBERON:0002405,3.36e-07,93;UBERON:0002390,4.88e-07,98;UBERON:0003061,4.88e-07,98;UBERON:0001016,4.96e-07,89;UBERON:0000922,7.76e-07,592;UBERON:0002050,9.86e-07,564 | |||
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| ||
|short_description=p1@TMEM33 | |||
}} | }} |
Latest revision as of 20:01, 17 September 2015
Short description: | p1@TMEM33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM33_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000264452, ENST00000325094, ENST00000504986, ENST00000508448, ENST00000513702, NM_018126, uc003gwi.2, uc010ifw.2_5end |
EntrezGene: | TMEM33 |
HGNC: | 25541 |
UniProt: | P57088D6RAA6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.74e-15 | 59 |
monocyte | 3.74e-15 | 59 |
monoblast | 3.74e-15 | 59 |
promonocyte | 3.74e-15 | 59 |
defensive cell | 2.53e-14 | 48 |
phagocyte | 2.53e-14 | 48 |
macrophage dendritic cell progenitor | 2.61e-14 | 61 |
granulocyte monocyte progenitor cell | 9.91e-13 | 67 |
myeloid leukocyte | 2.65e-12 | 72 |
myeloid lineage restricted progenitor cell | 7.77e-12 | 66 |
classical monocyte | 4.48e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.48e-11 | 42 |
myeloid cell | 2.99e-10 | 108 |
common myeloid progenitor | 2.99e-10 | 108 |
endodermal cell | 1.89e-07 | 58 |
endo-epithelial cell | 8.84e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
bone element | 4.38e-11 | 82 |
bone marrow | 4.71e-10 | 76 |
skeletal element | 1.87e-09 | 90 |
skeletal system | 9.47e-09 | 100 |
immune system | 3.36e-07 | 93 |
hematopoietic system | 4.88e-07 | 98 |
blood island | 4.88e-07 | 98 |
nervous system | 4.96e-07 | 89 |
embryo | 7.76e-07 | 592 |
embryonic structure | 9.86e-07 | 564 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.26e-07 | 239 |