FFCP PHASE1:Hg19::chr4:75089754..75089790,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:75089754..75089790,+
|short_description=p2@MTHFD2L
|description=CAGE_peak_2_at_MTHFD2L_5end
|association_with_transcript=0bp_to_ENST00000461856,uc003hhu.2_...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=441024 | |EntrezGene=441024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31865 | |HGNC=31865 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000461856,uc003hhu.2_5end | |||
|cluster_id=chr4:75089754..75089790,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_MTHFD2L_5end | |||
|id=chr4:75089754..75089790,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.59e-54!42;CL:0000860!4.99e-53!45;CL:0002194!3.42e-36!63;CL:0000576!3.42e-36!63;CL:0000040!3.42e-36!63;CL:0000559!3.42e-36!63;CL:0002009!9.32e-35!65;CL:0000766!4.25e-34!76;CL:0000839!1.58e-31!70;CL:0000557!6.16e-31!71;CL:0000763!1.77e-23!112;CL:0000049!1.77e-23!112;CL:0002087!1.11e-17!119;CL:0000738!1.70e-16!140;CL:0002031!2.26e-14!124;CL:0000037!7.93e-14!172;CL:0000566!7.93e-14!172;CL:0002032!4.30e-13!165;CL:0000837!4.30e-13!165;CL:0000988!2.01e-12!182;CL:0000048!4.09e-12!430;CL:0000034!8.88e-12!444;CL:0000723!1.10e-11!436;CL:0000134!4.79e-10!358;CL:0002320!1.50e-09!365;CL:0000219!2.35e-09!390;CL:0000767!2.26e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.38e-111;33!CL:0002057;8.38e-111;33!CL:0000473;5.72e-76;39!CL:0000234;5.72e-76;39!CL:0000576;1.43e-60;48!CL:0000766;2.06e-37;69!CL:0000763;1.64e-18;100!CL:0002087;3.50e-16;104!CL:0000738;1.14e-10;136!CL:0002393;1.75e-07;6!CL:0002397;1.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.00e-115,42;CL:0002057,1.00e-115,42;CL:0000473,1.96e-100,48;CL:0000234,1.96e-100,48;CL:0002194,5.12e-79,59;CL:0000576,5.12e-79,59;CL:0000040,5.12e-79,59;CL:0000559,5.12e-79,59;CL:0002009,2.97e-76,61;CL:0000839,4.60e-70,66;CL:0000557,6.19e-69,67;CL:0000766,5.67e-68,72;CL:0000763,3.50e-46,108;CL:0000049,3.50e-46,108;CL:0002087,3.45e-40,115;CL:0002031,8.78e-36,120;CL:0000738,2.99e-35,136;CL:0000037,3.68e-29,168;CL:0002032,8.83e-29,161;CL:0000837,8.83e-29,161;CL:0000988,2.52e-27,177;CL:0000134,6.28e-12,354;CL:0002320,1.49e-11,361;CL:0000219,3.16e-10,386;CL:0000034,1.22e-09,441;CL:0000048,2.18e-09,427;CL:0000723,3.76e-09,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.90e-85;42!CL:0000049;3.09e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.80e-28!80;UBERON:0001474!2.41e-25!86;UBERON:0002390!6.32e-24!102;UBERON:0003061!6.32e-24!102;UBERON:0002193!5.26e-22!112;UBERON:0004765!2.53e-21!101;UBERON:0001434!2.53e-21!101;UBERON:0002204!2.67e-18!167;UBERON:0002405!2.17e-17!115;UBERON:0003081!2.36e-14!216;UBERON:0002384!7.07e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.29e-60,76;UBERON:0001474,2.90e-55,82;UBERON:0004765,8.20e-50,90;UBERON:0002390,2.86e-48,98;UBERON:0003061,2.86e-48,98;UBERON:0002405,5.24e-48,93;UBERON:0001434,3.27e-44,100;UBERON:0002193,3.27e-43,108;UBERON:0002204,1.29e-25,167;UBERON:0003081,6.54e-23,203;UBERON:0000926,3.03e-13,315;UBERON:0004120,3.03e-13,315;UBERON:0006603,3.03e-13,315;UBERON:0002384,4.86e-11,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.40381113229099,1.95309783644267,0,0,0,1.45398238779565,2.64513160582167,0,8.36744532860465,12.7462045286766,17.3435567701258,58.9769404260408,34.5816953814286,56.0462884835947,16.5477926753577,32.2742341791913,23.0225027210381,4.51781614902251,10.643339852256,10.562003768919,26.9353825286394,29.5254704910006,21.7374622771674,9.89553900560148,14.7603106640008,5.11469700639233,44.1118042715448,62.4123747160254,59.7909359035752,31.4060831570929,26.5956288394303,42.1346358727926,49.0373597133029,83.2307457331896,91.4576299704156,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,2.68931008999267,0,0,0,0,0,0,0,0,4.02253351671761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.757612021100357,0,0,4.34796129954155,0,0.15543720058278,0.295710299979268,0.318593534327405,3.14862178514523,0,0,0,0,0,0,0,0.545545977607678,0.859284456339908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,2.36018566109342,0.767658796194425,0.928896739896456,0,0,0,0,0,0,1.66198622559563,1.40381113229099,1.95309783644267,0,0,0,1.45398238779565,2.64513160582167,0,8.36744532860465,12.7462045286766,17.3435567701258,58.9769404260408,34.5816953814286,56.0462884835947,16.5477926753577,32.2742341791913,23.0225027210381,4.51781614902251,10.643339852256,10.562003768919,26.9353825286394,29.5254704910006,21.7374622771674,9.89553900560148,14.7603106640008,5.11469700639233,44.1118042715448,62.4123747160254,59.7909359035752,31.4060831570929,26.5956288394303,42.1346358727926,49.0373597133029,83.2307457331896,91.4576299704156,0,0,0,0,0,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0.358779271377724,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94443704049192,0.6970372701606,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.731140468893853,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0.622079175323615,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0.397429223405979,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105600336519406,2.68931008999267,0,0,0,0,0,0,0,0,4.02253351671761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.757612021100357,0,0,4.34796129954155,0,0.15543720058278,0.295710299979268,0.318593534327405,3.14862178514523,0,0,0,0,0,0,0,0.545545977607678,0.859284456339908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0,0,0,0,1.47463745252232,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@MTHFD2L | |||
}} | }} |
Latest revision as of 15:36, 18 September 2015
Short description: | p2@MTHFD2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MTHFD2L_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000461856, uc003hhu.2_5end |
EntrezGene: | MTHFD2L |
HGNC: | 31865 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.00e-115 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.00e-115 | 42 |
defensive cell | 1.96e-100 | 48 |
phagocyte | 1.96e-100 | 48 |
monopoietic cell | 5.12e-79 | 59 |
monocyte | 5.12e-79 | 59 |
monoblast | 5.12e-79 | 59 |
promonocyte | 5.12e-79 | 59 |
macrophage dendritic cell progenitor | 2.97e-76 | 61 |
myeloid lineage restricted progenitor cell | 4.60e-70 | 66 |
granulocyte monocyte progenitor cell | 6.19e-69 | 67 |
myeloid leukocyte | 5.67e-68 | 72 |
myeloid cell | 3.50e-46 | 108 |
common myeloid progenitor | 3.50e-46 | 108 |
nongranular leukocyte | 3.45e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 8.78e-36 | 120 |
leukocyte | 2.99e-35 | 136 |
hematopoietic stem cell | 3.68e-29 | 168 |
hematopoietic oligopotent progenitor cell | 8.83e-29 | 161 |
hematopoietic multipotent progenitor cell | 8.83e-29 | 161 |
hematopoietic cell | 2.52e-27 | 177 |
mesenchymal cell | 6.28e-12 | 354 |
connective tissue cell | 1.49e-11 | 361 |
motile cell | 3.16e-10 | 386 |
stem cell | 1.22e-09 | 441 |
multi fate stem cell | 2.18e-09 | 427 |
somatic stem cell | 3.76e-09 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.29e-60 | 76 |
bone element | 2.90e-55 | 82 |
skeletal element | 8.20e-50 | 90 |
hematopoietic system | 2.86e-48 | 98 |
blood island | 2.86e-48 | 98 |
immune system | 5.24e-48 | 93 |
skeletal system | 3.27e-44 | 100 |
hemolymphoid system | 3.27e-43 | 108 |
musculoskeletal system | 1.29e-25 | 167 |
lateral plate mesoderm | 6.54e-23 | 203 |
mesoderm | 3.03e-13 | 315 |
mesoderm-derived structure | 3.03e-13 | 315 |
presumptive mesoderm | 3.03e-13 | 315 |
connective tissue | 4.86e-11 | 371 |