FFCP PHASE1:Hg19::chr5:126147449..126147493,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:126147449..126147493,+
|short_description=p2@LMNB1
|description=CAGE_peak_2_at_LMNB1_5end
|association_with_transcript=44bp_to_ENST00000494185_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=44bp_to_ENST00000494185_5end | |||
|cluster_id=chr5:126147449..126147493,+ | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_LMNB1_5end | |||
|id=chr5:126147449..126147493,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.62e-25!42;CL:0000860!3.91e-23!45;CL:0000738!1.36e-22!140;CL:0000037!9.33e-22!172;CL:0000566!9.33e-22!172;CL:0000766!2.64e-21!76;CL:0002032!9.35e-21!165;CL:0000837!9.35e-21!165;CL:0000988!1.06e-20!182;CL:0002031!5.92e-19!124;CL:0000763!1.44e-17!112;CL:0000049!1.44e-17!112;CL:0002087!9.73e-17!119;CL:0000557!3.18e-16!71;CL:0000839!7.58e-16!70;CL:0002009!4.92e-14!65;CL:0002194!2.05e-13!63;CL:0000576!2.05e-13!63;CL:0000040!2.05e-13!63;CL:0000559!2.05e-13!63;CL:0002139!2.67e-09!24;CL:0000094!1.20e-07!8;CL:0000213!6.71e-07!57;CL:0000215!6.71e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.83e-47;33!CL:0002057;1.83e-47;33!CL:0000473;7.18e-32;39!CL:0000234;7.18e-32;39!CL:0000576;4.62e-25;48!CL:0000766;1.83e-22;69!CL:0000094;1.61e-15;8!CL:0000763;5.28e-12;100!CL:0000081;9.45e-11;11!CL:0000097;3.80e-09;5!CL:0002087;4.28e-09;104!CL:0000738;4.89e-09;136!CL:0002139;2.41e-08;24!CL:1000413;8.69e-08;9!CL:0000775;3.75e-07;3!CL:0002138;7.60e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.03e-47,72;CL:0000860,2.19e-46,42;CL:0002057,2.19e-46,42;CL:0000473,4.51e-39,48;CL:0000234,4.51e-39,48;CL:0000839,7.34e-34,66;CL:0000557,3.63e-33,67;CL:0000738,8.93e-33,136;CL:0000763,2.48e-30,108;CL:0000049,2.48e-30,108;CL:0002194,6.84e-29,59;CL:0000576,6.84e-29,59;CL:0000040,6.84e-29,59;CL:0000559,6.84e-29,59;CL:0002009,1.39e-27,61;CL:0002032,8.78e-27,161;CL:0000837,8.78e-27,161;CL:0000037,5.11e-26,168;CL:0002031,2.01e-25,120;CL:0000988,9.40e-24,177;CL:0002087,6.66e-22,115;CL:0000094,1.64e-15,8;CL:0000081,9.58e-11,11;CL:0000097,4.14e-09,5;CL:0002028,4.14e-09,5;CL:0002139,2.39e-08,24;CL:0000134,4.65e-08,354;CL:1000413,1.10e-07,9;CL:0002320,1.43e-07,361;CL:0000775,3.76e-07,3;CL:0005020,6.16e-07,6;CL:0002138,6.16e-07,6;CL:0005022,6.16e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.21e-34;42!CL:0000049;8.37e-09;108!CL:0005022;7.60e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.32e-23!112;UBERON:0002390!4.46e-21!102;UBERON:0003061!4.46e-21!102;UBERON:0003081!2.72e-15!216;UBERON:0002371!1.35e-12!80;UBERON:0002405!5.93e-12!115;UBERON:0001474!1.32e-11!86;UBERON:0000178!5.88e-10!15;UBERON:0000179!5.88e-10!15;UBERON:0000463!5.88e-10!15;UBERON:0001009!2.20e-09!113;UBERON:0004535!3.32e-09!110;UBERON:0004765!3.31e-08!101;UBERON:0001434!3.31e-08!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.75e-11;15!UBERON:0000179;4.75e-11;15!UBERON:0000463;4.75e-11;15!UBERON:0003915;8.69e-08;9!UBERON:0004700;8.69e-08;9!UBERON:0001917;8.69e-08;9!UBERON:0002193;3.35e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,9.55e-42,108;UBERON:0002390,5.38e-37,98;UBERON:0003061,5.38e-37,98;UBERON:0002405,8.82e-32,93;UBERON:0002371,9.43e-28,76;UBERON:0001474,8.22e-25,82;UBERON:0004765,1.63e-21,90;UBERON:0003081,2.53e-20,203;UBERON:0001434,3.68e-18,100;UBERON:0000178,4.82e-11,15;UBERON:0000179,4.82e-11,15;UBERON:0000463,4.82e-11,15;UBERON:0000926,6.05e-09,315;UBERON:0004120,6.05e-09,315;UBERON:0006603,6.05e-09,315;UBERON:0003915,1.10e-07,9;UBERON:0004700,1.10e-07,9;UBERON:0001917,1.10e-07,9;UBERON:0002204,4.17e-07,167;UBERON:0002384,6.48e-07,371 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.975865597581014,0,0.204000691244253,0,0,0.410623275218653,0.125542639594803,0.0764134057479513,0,0.157421562627358,46.8103489450196,11.5148819429164,3.09632246632152,0,0,0,0.154934401160603,0,0.587200878669695,2.76997704265939,2.00544447470142,2.38711957787437,0,0,0,20.9373463842573,13.9814099164859,18.1938045890862,24.1726198381912,9.45686142450199,16.1047312865454,44.016936025289,20.7490172288572,46.5869992880513,43.4379557728139,12.2642089880927,40.6279459783025,35.0130751549245,12.0078706025452,32.1354582756471,59.3802751199551,21.8231738411744,42.8355874285358,31.0060222175513,17.9517291859469,25.147260281429,51.0768259986308,11.3477044938228,28.0270012048009,43.9685164199301,19.8163508999677,44.3065243198438,65.3831462844038,26.1477121551171,42.7224223045194,0.211255286311942,0.850417199860174,0.419317291016752,1.01095768031846,1.50176892841506,0.803627933485401,0,0.79566670879636,0,0,1.09227722252426,1.77901850772711,0.853460445133014,1.20118796110804,1.14950487990897,0,0,0,0,0,0,5.04457706683382,0,0.196709770113833,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,4.2335973616366,0,0.664601683750863,1.89562704635511,1.5370958367081,1.30059347559878,1.15106533222573,0.276350017785848,0.869409257205157,0,0,0,0.906474741580529,0.383220493601921,0.34362744548263,0.506039384039006,0.637130828648193,0.651083453856419,0,0.301150238155546,0.127986611154418,2.49861453104692,1.89421801635213,0.821127996921047,0.604820229674197,1.06976078313403,0.579297615531196,0,0.670700859703636,0.511450247374121,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0.476981248610684,0,0,4.96906018416763,0.860234595106124,1.04142150482278,1.13061588384802,5.45349267072878,0.550236083880135,1.04497483268405,1.55050055501597,1.42306505074684,0.66944122552934,0.402829317109147,0.760272105718513,0.488124115096339,2.94130464276695,1.62028389576352,1.42879565254528,0.22452937262617,0.788280363383256,0,0,0.366403487860815,119.920179866818,147.356500376364,0,0,0.759783069987479,0.794455084879313,0.286836620748814,0,0.560677600142307,0,0,0,3.09834545760283,0.817309515567294,0,0,0,0,0,0,0.23486899728753,0.161872944368132,0,0,0,0,0,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,1.02088964844019,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339121184620975,0,0,0,0.121973706129595,0.265059536642971,0,0,0.504641701751257,0.72995471815166,0,0,0,0,0,0.236613600079688,0.168584690078102,0.241011029883482,0,0,0.949082476444386,0,0.392442930250692,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0,0.171567810298526,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0.117408694235822,7.50705528357584,7.87075371380238,8.94194515502612,0,0,0,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,384.277325558836,20.5152851250817,2.07328115540772,2.45003920808834,3.91351543621778,0.063497894292169,0,0,0,0,0.600686115687835,0,0,0,0.22001485746285,0.646358578788889,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,1.20575750823834,0.871533458600294,1.89948683245908,0,0,0,0,0,0,0.144781306667579,0,0,0.448340575974109,1.97030760201927,2.80315847317372,2.43851768931522,0,0,0,0.167516265334349,1.27587750330633,82.3907726341901,47.865833472644,229.586194443564,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0,0,0,0.620304078368662,3.01999881146064,0.960548020230999,0.303127571446259,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0.229628896329213,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0.680374821106063,1.72732732881711,0,0,0,0.254876273045038,0,0,0.438519753291869,0,0,0,0,1.54561517471583,0.183138929636687,0.165018999841176,0,0,0,0,0,0.15350367472613,0.275673144969061,0.107420244868274,0,0,0,0,0,0,0,0,0.62962469366128,0,2.15623506123262,0,0,0,0,0,0,0.38126038784765,0,0,0.95460974377781,0,0.179872457583315,0.274537029736055,0.117812402345686,0.202182481573316,0,0.842516912477962,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0.573645408816206,0.196498082026242,0,0,0,0,0.379473173765715,0,0,0,0,2.54188262097304,0,0,0.443430153536676,0,32.4766469908588,35.9379487356916,41.0145974765397,17.1526878329608,32.9089818468955,39.5568719827558,31.8618547970488,27.7593811702995,0.213648142254946,0,0,0,0.144269212976445,0.355709216742071,0.159426272728822,0.199579371432817,0,1.05836791361941,0.324621940274555,0.280797178113459,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0.80719882876419,0.425846237690326,0,0,0,0.166849141711909,0,0.278406173895242,0,0.540911356951966,0,0,0,0.146508179271894,0.121360521749513,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,0.140669416410513,0,0.494411622680279,0,0.19924798825107,0.276283915531148,0,0.20453736500431,0,0,0,0,0,0.295930216910801,9.57932369387759,0,0,0,0,0,0,0,0,0.254253650292766,0.236387681767936,1.03423011972439,0,0.173624994933292,0,0.361789315876224,0,0,0,0,0.10893846351899,0,0.2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| ||
|short_description=p2@LMNB1 | |||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p2@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LMNB1_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 44bp_to_ENST00000494185_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 9.55e-42 | 108 |
hematopoietic system | 5.38e-37 | 98 |
blood island | 5.38e-37 | 98 |
immune system | 8.82e-32 | 93 |
bone marrow | 9.43e-28 | 76 |
bone element | 8.22e-25 | 82 |
skeletal element | 1.63e-21 | 90 |
lateral plate mesoderm | 2.53e-20 | 203 |
skeletal system | 3.68e-18 | 100 |
blood | 4.82e-11 | 15 |
haemolymphatic fluid | 4.82e-11 | 15 |
organism substance | 4.82e-11 | 15 |
mesoderm | 6.05e-09 | 315 |
mesoderm-derived structure | 6.05e-09 | 315 |
presumptive mesoderm | 6.05e-09 | 315 |
endothelial tube | 1.10e-07 | 9 |
arterial system endothelium | 1.10e-07 | 9 |
endothelium of artery | 1.10e-07 | 9 |
musculoskeletal system | 4.17e-07 | 167 |
connective tissue | 6.48e-07 | 371 |