FFCP PHASE1:Hg19::chr5:150630740..150630749,-: Difference between revisions
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|id=chr5:150630740..150630749,-
|short_description=p@chr5:150630740..150630749,-
|description=CAGE_peak_at_chr5:150630740..150630749,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:150630740..150630749,- | |||
|description=CAGE_peak_at_chr5:150630740..150630749,- | |||
|id=chr5:150630740..150630749,- | |||
|ontology_enrichment_celltype=CL:0000181!3.50e-18!12;CL:0000417!3.50e-18!12;CL:0000668!3.50e-18!12;CL:0000414!3.50e-18!12;CL:0000412!3.50e-18!12;CL:0000182!3.50e-18!12;CL:0000542!4.23e-13!53;CL:0000051!4.23e-13!53;CL:0000838!1.74e-11!52;CL:0000080!8.46e-08!6;CL:0000223!3.94e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.23e-41;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.58e-41,12;CL:0000223,1.14e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.23e-29;11!UBERON:0009497;1.04e-24;13!UBERON:0001041;5.95e-11;30!UBERON:0003104;1.62e-10;31 | |||
|ontology_enrichment_disease=DOID:0060058!3.23e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:7;5.16e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.61e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0005057!2.00e-15!26;UBERON:0002107!3.31e-14!19;UBERON:0006925!3.31e-14!19;UBERON:0008836!3.31e-14!19;UBERON:0008835!4.36e-12!22;UBERON:0003894!4.36e-12!22;UBERON:0009854!1.67e-11!23;UBERON:0002368!5.84e-11!35;UBERON:0007499!1.77e-10!25;UBERON:0009497!1.77e-10!25;UBERON:0000015!1.77e-10!25;UBERON:0002423!1.77e-10!25;UBERON:0006235!1.77e-10!25;UBERON:0004161!1.77e-10!25;UBERON:0009856!5.04e-10!26;UBERON:0000949!7.11e-10!45;UBERON:0003929!1.88e-09!54;UBERON:0002365!3.39e-08!31;UBERON:0002330!3.39e-08!31;UBERON:0002530!5.35e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.36e-26;19!UBERON:0006925;4.36e-26;19!UBERON:0002423;6.84e-20;25!UBERON:0002331;1.01e-18;10!UBERON:0002365;1.76e-15;31!UBERON:0002330;1.76e-15;31!UBERON:0002368;2.47e-14;33!UBERON:0000178;1.02e-12;15!UBERON:0000179;1.02e-12;15!UBERON:0000463;1.02e-12;15!UBERON:0000949;7.88e-11;43!UBERON:0000478;3.54e-08;24!UBERON:0002417;3.73e-07;58!UBERON:0000916;3.73e-07;58!UBERON:0002530;6.09e-07;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.93e-26,19;UBERON:0006925,3.93e-26,19;UBERON:0008836,3.93e-26,19;UBERON:0008835,1.31e-22,22;UBERON:0003894,1.31e-22,22;UBERON:0009854,1.23e-21,23;UBERON:0007499,6.32e-20,25;UBERON:0009497,6.32e-20,25;UBERON:0000015,6.32e-20,25;UBERON:0002423,6.32e-20,25;UBERON:0006235,6.32e-20,25;UBERON:0004161,6.32e-20,25;UBERON:0009856,3.61e-19,26;UBERON:0002331,9.48e-19,10;UBERON:0000358,9.48e-19,10;UBERON:0000307,9.48e-19,10;UBERON:0000091,9.48e-19,10;UBERON:0000087,9.48e-19,10;UBERON:0007010,9.48e-19,10;UBERON:0007806,9.48e-19,10;UBERON:0008780,9.48e-19,10;UBERON:0005728,9.48e-19,10;UBERON:0002365,4.12e-16,31;UBERON:0002330,4.12e-16,31;UBERON:0002368,2.72e-14,35;UBERON:0000178,9.83e-13,15;UBERON:0000179,9.83e-13,15;UBERON:0000463,9.83e-13,15;UBERON:0000949,3.79e-11,45;UBERON:0003929,2.63e-09,54;UBERON:0005172,2.63e-09,54;UBERON:0005173,2.63e-09,54;UBERON:0002530,1.59e-08,59;UBERON:0002417,2.20e-08,60;UBERON:0000916,2.20e-08,60;UBERON:0000478,3.46e-08,24 | |||
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| ||
|short_description=p@chr5:150630740..150630749,- | |||
}} | }} |
Latest revision as of 11:52, 30 July 2015
Short description: | p@chr5:150630740..150630749, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:150630740..150630749, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.58e-41 | 12 |
endodermal cell | 1.14e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 3.93e-26 | 19 |
digestive gland | 3.93e-26 | 19 |
liver bud | 3.93e-26 | 19 |
hepatic diverticulum | 1.31e-22 | 22 |
liver primordium | 1.31e-22 | 22 |
digestive tract diverticulum | 1.23e-21 | 23 |
epithelial sac | 6.32e-20 | 25 |
epithelium of foregut-midgut junction | 6.32e-20 | 25 |
anatomical boundary | 6.32e-20 | 25 |
hepatobiliary system | 6.32e-20 | 25 |
foregut-midgut junction | 6.32e-20 | 25 |
septum transversum | 6.32e-20 | 25 |
sac | 3.61e-19 | 26 |
umbilical cord | 9.48e-19 | 10 |
blastocyst | 9.48e-19 | 10 |
blastula | 9.48e-19 | 10 |
bilaminar disc | 9.48e-19 | 10 |
inner cell mass | 9.48e-19 | 10 |
cleaving embryo | 9.48e-19 | 10 |
connecting stalk | 9.48e-19 | 10 |
inner cell mass derived epiblast | 9.48e-19 | 10 |
extraembryonic mesoderm | 9.48e-19 | 10 |
exocrine gland | 4.12e-16 | 31 |
exocrine system | 4.12e-16 | 31 |
endocrine gland | 2.72e-14 | 35 |
blood | 9.83e-13 | 15 |
haemolymphatic fluid | 9.83e-13 | 15 |
organism substance | 9.83e-13 | 15 |
endocrine system | 3.79e-11 | 45 |
gut epithelium | 2.63e-09 | 54 |
abdomen element | 2.63e-09 | 54 |
abdominal segment element | 2.63e-09 | 54 |
gland | 1.59e-08 | 59 |
abdominal segment of trunk | 2.20e-08 | 60 |
abdomen | 2.20e-08 | 60 |
extraembryonic structure | 3.46e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.61e-08 | 39 |