FFCP PHASE1:Hg19::chr1:44482876..44482891,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=6536 | |EntrezGene=6536 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=11056 | |HGNC=11056 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P48067 | |UniProt=P48067 | ||
|association_with_transcript=105bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | |association_with_transcript=105bp_to_ENST00000357730,ENST00000360584,NM_006934,NM_201649,uc001cll.2,uc001clm.2,uc009vxd.2,uc010okn.1_5end | ||
|cluster_id=chr1:44482876..44482891,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_9_at_SLC6A9_5end | |description=CAGE_peak_9_at_SLC6A9_5end |
Latest revision as of 05:43, 18 September 2015
Short description: | p9@SLC6A9 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SLC6A9_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 105bp_to_ENST00000357730, ENST00000360584, NM_006934, NM_201649, uc001cll.2, uc001clm.2, uc009vxd.2, uc010okn.1_5end |
EntrezGene: | SLC6A9 |
HGNC: | 11056 |
UniProt: | P48067 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p9@SLC6A9 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 1.32e-50 | 56 |
neural rod | 1.32e-50 | 56 |
future spinal cord | 1.32e-50 | 56 |
neural keel | 1.32e-50 | 56 |
brainstem | 2.58e-46 | 6 |
central nervous system | 2.68e-45 | 81 |
nervous system | 1.71e-44 | 89 |
regional part of nervous system | 5.81e-43 | 53 |
regional part of brain | 5.81e-43 | 53 |
neural plate | 2.60e-41 | 82 |
Showing 1 to 10 of 96 entries