FFCP PHASE1:Hg19::chr6:137815524..137815537,-: Difference between revisions
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|id=chr6:137815524..137815537,-
|short_description=p1@OLIG3
|description=CAGE_peak_1_at_OLIG3_5end
|association_with_transcript=0bp_to_ENST00000367734,NM_175747,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=167826 | |EntrezGene=167826 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18003 | |HGNC=18003 | ||
|TSSclassifier=strong | |||
|UniProt=Q7RTU3 | |UniProt=Q7RTU3 | ||
|association_with_transcript=0bp_to_ENST00000367734,NM_175747,uc003qhp.1_5end | |||
|cluster_id=chr6:137815524..137815537,- | |||
|description=CAGE_peak_1_at_OLIG3_5end | |||
|id=chr6:137815524..137815537,- | |||
|ontology_enrichment_celltype=CL:0002322!3.23e-27!5;CL:0000540!4.61e-14!6;CL:0000031!4.61e-14!6;CL:0000404!4.61e-14!6;CL:0000047!1.41e-10!8;CL:0000080!6.30e-09!6;CL:0002603!4.70e-08!3;CL:0000039!2.47e-07!7;CL:0000586!2.47e-07!7;CL:0000133!7.30e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.24e-52;5!CL:0002321;7.92e-25;15!CL:0002603;9.97e-15;3!CL:0000148;3.11e-10;10!CL:0000540;8.13e-08;6!CL:0000404;8.13e-08;6!CL:0000147;1.89e-07;14!CL:0000128;8.10e-07;7!CL:0000126;8.10e-07;7!CL:0000127;8.10e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.38e-52,5;CL:0002603,9.97e-15,3;CL:0000148,3.11e-10,10;CL:0000541,3.11e-10,10;CL:0000133,4.82e-10,59;CL:0000333,2.15e-08,41;CL:0000221,4.09e-08,72;CL:0000540,7.58e-08,6;CL:0000031,7.58e-08,6;CL:0000404,7.58e-08,6;CL:0000147,1.89e-07,14;CL:0000128,8.10e-07,7;CL:0000126,8.10e-07,7;CL:0000127,8.10e-07,7;CL:0002453,8.10e-07,7 | |||
|ontology_enrichment_development_v019=CL:0000031;8.13e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!3.31e-08!22;DOID:2994!3.31e-08!22;DOID:0060060!8.67e-07!1;DOID:0060061!8.67e-07!1;DOID:8691!8.67e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:0060060;6.26e-12;1!DOID:0060061;6.26e-12;1!DOID:8691;6.26e-12;1!DOID:3095;6.67e-08;22!DOID:2994;6.67e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.26e-12,1;DOID:0060061,6.26e-12,1;DOID:8691,6.26e-12,1;DOID:3095,6.67e-08,22;DOID:2994,6.67e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0003076!7.82e-12!15;UBERON:0003057!7.82e-12!15;UBERON:0002148!4.49e-11!2;UBERON:0009662!4.49e-11!2;UBERON:0004733!1.43e-10!12;UBERON:0002028!1.43e-10!12;UBERON:0007277!1.43e-10!12;UBERON:0004732!9.72e-10!13;UBERON:0002680!2.10e-09!9;UBERON:0001895!2.10e-09!9;UBERON:0010092!2.10e-09!9;UBERON:0000988!1.15e-07!3;UBERON:0006331!1.15e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;2.42e-11;49!UBERON:0002331;2.49e-10;10!UBERON:0002037;8.13e-08;6!UBERON:0000178;4.78e-07;15!UBERON:0000179;4.78e-07;15!UBERON:0000463;4.78e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,2.49e-10,10;UBERON:0000358,2.49e-10,10;UBERON:0000307,2.49e-10,10;UBERON:0000091,2.49e-10,10;UBERON:0000087,2.49e-10,10;UBERON:0007010,2.49e-10,10;UBERON:0007806,2.49e-10,10;UBERON:0008780,2.49e-10,10;UBERON:0005728,2.49e-10,10;UBERON:0002037,8.13e-08,6;UBERON:0006215,8.13e-08,6;UBERON:0000178,4.78e-07,15;UBERON:0000179,4.78e-07,15;UBERON:0000463,4.78e-07,15 | |||
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|short_description=p1@OLIG3 | |||
}} | }} |
Latest revision as of 01:54, 25 September 2015
Short description: | p1@OLIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OLIG3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000367734, NM_175747, uc003qhp.1_5end |
EntrezGene: | OLIG3 |
HGNC: | 18003 |
UniProt: | Q7RTU3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.38e-52 | 5 |
astrocyte of the cerebellum | 9.97e-15 | 3 |
melanocyte | 3.11e-10 | 10 |
melanoblast | 3.11e-10 | 10 |
neurectodermal cell | 4.82e-10 | 59 |
migratory neural crest cell | 2.15e-08 | 41 |
ectodermal cell | 4.09e-08 | 72 |
neuron | 7.58e-08 | 6 |
neuroblast | 7.58e-08 | 6 |
electrically signaling cell | 7.58e-08 | 6 |
pigment cell | 1.89e-07 | 14 |
oligodendrocyte | 8.10e-07 | 7 |
macroglial cell | 8.10e-07 | 7 |
astrocyte | 8.10e-07 | 7 |
oligodendrocyte precursor cell | 8.10e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 2.49e-10 | 10 |
blastocyst | 2.49e-10 | 10 |
blastula | 2.49e-10 | 10 |
bilaminar disc | 2.49e-10 | 10 |
inner cell mass | 2.49e-10 | 10 |
cleaving embryo | 2.49e-10 | 10 |
connecting stalk | 2.49e-10 | 10 |
inner cell mass derived epiblast | 2.49e-10 | 10 |
extraembryonic mesoderm | 2.49e-10 | 10 |
cerebellum | 8.13e-08 | 6 |
rhombic lip | 8.13e-08 | 6 |
blood | 4.78e-07 | 15 |
haemolymphatic fluid | 4.78e-07 | 15 |
organism substance | 4.78e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.26e-12 | 1 |
cutaneous T cell lymphoma | 6.26e-12 | 1 |
mycosis fungoides | 6.26e-12 | 1 |
germ cell and embryonal cancer | 6.67e-08 | 22 |
germ cell cancer | 6.67e-08 | 22 |