FFCP PHASE1:Hg19::chr6:37137909..37137936,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:37137909..37137936,+
|short_description=p2@PIM1
|description=CAGE_peak_2_at_PIM1_5end
|association_with_transcript=0bp_to_NM_001243186,NM_002648,uc003onk.2...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5292 | |EntrezGene=5292 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8986 | |HGNC=8986 | ||
|TSSclassifier=strong | |||
|UniProt=P11309 | |UniProt=P11309 | ||
|association_with_transcript=0bp_to_NM_001243186,NM_002648,uc003onk.2_5end | |||
|cluster_id=chr6:37137909..37137936,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_2_at_PIM1_5end | |||
|id=chr6:37137909..37137936,+ | |||
|ontology_enrichment_celltype=CL:0000037!7.99e-17!172;CL:0000566!7.99e-17!172;CL:0000988!8.55e-17!182;CL:0002032!7.98e-16!165;CL:0000837!7.98e-16!165;CL:0000738!1.15e-10!140;CL:0000791!1.44e-10!18;CL:0000789!1.44e-10!18;CL:0002420!1.44e-10!18;CL:0002419!1.44e-10!18;CL:0000790!1.44e-10!18;CL:0000838!3.17e-10!52;CL:0000542!4.69e-10!53;CL:0000051!4.69e-10!53;CL:0002087!1.08e-09!119;CL:0002031!8.39e-09!124;CL:0000084!1.64e-08!25;CL:0000827!1.64e-08!25;CL:0000763!3.29e-07!112;CL:0000049!3.29e-07!112;CL:0000625!3.73e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.42e-10;18!CL:0000789;1.42e-10;18!CL:0002419;1.42e-10;18!CL:0000084;1.37e-08;25!CL:0000625;3.78e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.31e-17,177;CL:0000037,4.11e-17,168;CL:0002032,4.13e-16,161;CL:0000837,4.13e-16,161;CL:0000738,6.76e-11,136;CL:0000791,1.43e-10,18;CL:0000789,1.43e-10,18;CL:0002420,1.43e-10,18;CL:0002419,1.43e-10,18;CL:0000790,1.43e-10,18;CL:0000838,3.17e-10,52;CL:0000542,4.69e-10,53;CL:0000051,4.69e-10,53;CL:0002087,6.05e-10,115;CL:0002031,5.11e-09,120;CL:0000084,1.64e-08,25;CL:0000827,1.64e-08,25;CL:0000763,2.13e-07,108;CL:0000049,2.13e-07,108;CL:0000625,3.73e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.42e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.67e-08!15;UBERON:0000179!3.67e-08!15;UBERON:0000463!3.67e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.54e-08;15!UBERON:0000179;3.54e-08;15!UBERON:0000463;3.54e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.67e-08,15;UBERON:0000179,3.67e-08,15;UBERON:0000463,3.67e-08,15 | |||
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| ||
|short_description=p2@PIM1 | |||
}} | }} |
Latest revision as of 14:20, 18 September 2015
Short description: | p2@PIM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PIM1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_NM_001243186, NM_002648, uc003onk.2_5end |
EntrezGene: | PIM1 |
HGNC: | 8986 |
UniProt: | P11309 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.31e-17 | 177 |
hematopoietic stem cell | 4.11e-17 | 168 |
hematopoietic oligopotent progenitor cell | 4.13e-16 | 161 |
hematopoietic multipotent progenitor cell | 4.13e-16 | 161 |
leukocyte | 6.76e-11 | 136 |
mature alpha-beta T cell | 1.43e-10 | 18 |
alpha-beta T cell | 1.43e-10 | 18 |
immature T cell | 1.43e-10 | 18 |
mature T cell | 1.43e-10 | 18 |
immature alpha-beta T cell | 1.43e-10 | 18 |
lymphoid lineage restricted progenitor cell | 3.17e-10 | 52 |
lymphocyte | 4.69e-10 | 53 |
common lymphoid progenitor | 4.69e-10 | 53 |
nongranular leukocyte | 6.05e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 5.11e-09 | 120 |
T cell | 1.64e-08 | 25 |
pro-T cell | 1.64e-08 | 25 |
myeloid cell | 2.13e-07 | 108 |
common myeloid progenitor | 2.13e-07 | 108 |
CD8-positive, alpha-beta T cell | 3.73e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 3.67e-08 | 15 |
haemolymphatic fluid | 3.67e-08 | 15 |
organism substance | 3.67e-08 | 15 |