FFCP PHASE1:Hg19::chr6:72294358..72294363,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:72294358..72294363,+
|short_description=p1@ENST00000405746
|description=CAGE_peak_1_at_ENST00000405746_5end
|association_with_transcript=-60bp_to_ENST00000...") |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-60bp_to_ENST00000405746_5end | |||
|cluster_id=chr6:72294358..72294363,+ | |||
|description=CAGE_peak_1_at_ENST00000405746_5end | |||
|id=chr6:72294358..72294363,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.86e-34!254;CL:0002076!1.61e-19!43;CL:0000223!2.06e-15!59;CL:0002368!3.68e-14!13;CL:0000077!2.96e-10!19;CL:0002202!1.07e-09!9;CL:0002632!1.07e-09!9;CL:0000063!2.76e-08!578;CL:0000076!3.35e-07!62;CL:0002251!6.07e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.45e-13;4!CL:0000731;1.45e-13;4!CL:0002536;8.97e-13;2!CL:0000650;2.87e-12;2!CL:1000500;2.87e-12;2!CL:1000618;2.87e-12;2!CL:1001318;2.87e-12;2!CL:0000575;2.87e-12;2!CL:0002173;2.87e-12;2!CL:1000497;1.12e-11;17!CL:0002518;1.12e-11;17!CL:0000349;1.37e-10;19!CL:1000449;1.84e-09;15!CL:1000507;2.34e-09;10!CL:1000494;2.34e-09;10!CL:1000746;5.90e-08;7!CL:1000612;5.90e-08;7!CL:0002681;8.20e-08;12!CL:0002584;8.20e-08;12!CL:0002368;1.70e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,8.67e-14,4;CL:0000731,8.67e-14,4;CL:0002536,1.14e-12,2;CL:0000650,2.88e-12,2;CL:1000500,2.88e-12,2;CL:1000618,2.88e-12,2;CL:1001318,2.88e-12,2;CL:0002173,2.88e-12,2;CL:0000066,3.33e-12,253;CL:0000575,4.30e-12,2;CL:1000497,1.53e-11,17;CL:0002518,1.53e-11,17;CL:0000349,1.28e-10,19;CL:1000449,2.09e-09,15;CL:1000507,2.80e-09,10;CL:1000494,2.80e-09,10;CL:1000746,5.77e-08,7;CL:1000612,5.77e-08,7;CL:0002681,9.68e-08,12;CL:0002584,9.68e-08,12;CL:0002368,2.20e-07,13 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.52e-13!106;DOID:299!3.15e-09!25;DOID:0050687!6.15e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.92e-12!169;UBERON:0000925!1.92e-12!169;UBERON:0006595!1.92e-12!169;UBERON:0000464!1.77e-10!104;UBERON:0000466!3.18e-10!126;UBERON:0005631!1.04e-08!14;UBERON:0000158!1.04e-08!14;UBERON:0005911!1.86e-08!82;UBERON:0005177!8.02e-08!107;UBERON:0006554!1.62e-07!44;UBERON:0005910!2.18e-07!6;UBERON:0001007!2.90e-07!155;UBERON:0001555!2.90e-07!155;UBERON:0007026!2.90e-07!155;UBERON:0001008!3.19e-07!45;UBERON:0000365!6.60e-07!5;UBERON:0000058!7.55e-07!26;UBERON:0009569!7.80e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.23e-14;10!UBERON:0000158;1.23e-14;10!UBERON:0006554;4.98e-14;30!UBERON:0001008;4.98e-14;30!UBERON:0000305;6.60e-14;7!UBERON:0003567;2.87e-12;2!UBERON:0003838;2.87e-12;2!UBERON:0003586;2.87e-12;2!UBERON:0005169;2.87e-12;2!UBERON:0002321;2.87e-12;2!UBERON:0005215;2.87e-12;2!UBERON:0002303;2.87e-12;2!UBERON:0002319;2.87e-12;2!UBERON:0000365;5.92e-11;5!UBERON:0006555;1.84e-09;15!UBERON:0004819;1.84e-09;15!UBERON:0001285;1.84e-09;15!UBERON:0007684;1.84e-09;15!UBERON:0004211;2.34e-09;10!UBERON:0009773;2.34e-09;10!UBERON:0001231;2.34e-09;10!UBERON:0004810;2.34e-09;10!UBERON:0005910;3.30e-09;6!UBERON:0000478;2.91e-08;24!UBERON:0002113;4.17e-08;24!UBERON:0011143;4.17e-08;24!UBERON:0000074;5.90e-08;7!UBERON:0001229;5.90e-08;7!UBERON:0001225;8.20e-08;12!UBERON:0008987;8.20e-08;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.29e-14,14;UBERON:0000158,1.29e-14,14;UBERON:0000305,7.56e-14,7;UBERON:0006554,1.09e-12,47;UBERON:0001008,2.21e-12,48;UBERON:0003567,2.88e-12,2;UBERON:0003838,2.88e-12,2;UBERON:0003586,2.88e-12,2;UBERON:0005169,2.88e-12,2;UBERON:0002321,2.88e-12,2;UBERON:0005215,2.88e-12,2;UBERON:0002303,2.88e-12,2;UBERON:0002319,2.88e-12,2;UBERON:0004871,3.93e-12,8;UBERON:0000365,3.94e-11,5;UBERON:0004211,2.09e-09,15;UBERON:0009773,2.09e-09,15;UBERON:0001231,2.09e-09,15;UBERON:0001285,2.09e-09,15;UBERON:0007684,2.09e-09,15;UBERON:0004208,2.09e-09,15;UBERON:0005910,2.36e-09,6;UBERON:0004810,2.80e-09,10;UBERON:0006555,8.38e-09,16;UBERON:0004819,8.38e-09,16;UBERON:0000478,2.77e-08,24;UBERON:0010532,5.77e-08,7;UBERON:0000074,5.77e-08,7;UBERON:0001229,5.77e-08,7;UBERON:0001230,5.77e-08,7;UBERON:0003220,5.77e-08,7;UBERON:0005749,5.77e-08,7;UBERON:0004199,5.77e-08,7;UBERON:0004209,5.77e-08,7;UBERON:0004198,5.77e-08,7;UBERON:0001225,9.68e-08,12;UBERON:0008987,9.68e-08,12;UBERON:0002113,2.36e-07,26;UBERON:0003918,2.36e-07,26;UBERON:0011143,2.36e-07,26;UBERON:0005095,2.36e-07,26;UBERON:0007687,2.36e-07,26;UBERON:0005103,5.06e-07,8;UBERON:0000083,5.06e-07,8;UBERON:0009201,5.06e-07,8;UBERON:0006553,5.06e-07,8;UBERON:0003074,5.06e-07,8;UBERON:0003060,5.06e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,1.31064823278103,3.4289707169699,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0.818238361772504,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0.790204397959275,3.43394464837949,0,0,0,0,0.503946384596579,0.567100388969546,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,0,0.604780586659361,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0.483437798366489,1.80455823272956,0.276242966807689,0,0,0,0.451199612907412,0.693138033939733,0,2.92278449306521,0.316654886678627,0,0,0,0,1.35473218771926,1.50506932156456,1.01950509218015,0,0.447749509444357,0,0,0.512900250232778,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,7.91198817466422,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0.354761064070598,0,0,0,0,0.962221127255121,0.670302275535787,2.17781969722645,0.282431402330337,1.72202149068492,1.68471475667626,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,5.25237866422918,2.37571744666111,0.921482106297696,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,0,0.7812832832557,0.524759999977174,0,0.227586896570999,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.0769502585037971,0,0,0.0897576444097721,0.651884231532048,1.5950057986596,0.549585560411174,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0.706765357169704,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.435296032902013,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0.586654148204409,0.240476460754601,0.85381197895741,1.19885765749278,0.288180834308212,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.901545653983311,1.90402606084398,0.813741466409323,0,0.429642228169954,0.928067519756987,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0.680117776536817,3.00979216620984,0,0.537266523244462,1.85280868296583,1.31570429747224,0.176689145945881,1.54331230616732,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.550285795565037,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0.591424344868181,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.266107110487916,0,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0.335566295393377,0.392600934460972,0.731507549893617,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.320965466756673,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0.203977659483963,0.26721740526556,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.129177819672012,0,0,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,2.79120467188971,1.31064823278103,3.4289707169699,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.90361775633475,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.358779271377724,0,0.211931901159562,0,0,0.257640540045629,0.18611685633159,0.168776332241266,0.0974370051611986,0,0,0,0,0,0,0,0.818238361772504,0.573609190778008,0.121973706129595,0,0,0.10366105501537,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,2.94017422771084,0,0,0,0,0.368965315629341,0.343135620597051,0,0,0,0.462942225792648,0,0,0,0,0,0,0,0,0.790204397959275,3.43394464837949,0,0,0,0,0.503946384596579,0.567100388969546,0,0,0,0,0.176096868026452,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.699810938274399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,1.5156378572313,0,0.604780586659361,0,0,0,0,0,0,0,0,0.355123450626254,0,0,0,0.483437798366489,1.80455823272956,0.276242966807689,0,0,0,0.451199612907412,0.693138033939733,0,2.92278449306521,0.316654886678627,0,0,0,0,1.35473218771926,1.50506932156456,1.01950509218015,0,0.447749509444357,0,0,0.512900250232778,0.984043937099117,0.650756789328606,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991709492165869,0.576570202095319,7.91198817466422,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.54907405947211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0.354761064070598,0,0,0,0,0.962221127255121,0.670302275535787,2.17781969722645,0.282431402330337,1.72202149068492,1.68471475667626,2.21715076768338,0.229723400206959,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,5.25237866422918,2.37571744666111,0.921482106297696,0,0,0,0,0.422250816255987,0,0,0,0,0,0,0.539210106883961,0.358042349351218,0,0,0,0,0,0,0,0.7812832832557,0.524759999977174,0,0.227586896570999,1.01701460117107,0.236387681767936,0,0,0,0,0,0,0,0,0,0,1.39423744278603,0.0769502585037971,0,0,0.0897576444097721,0.651884231532048,1.5950057986596,0.549585560411174,0,0,0,0,0,0,0.335643173951685,0,0,0,0.163232808159148,0.706765357169704,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0,0.435296032902013,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0,0.586654148204409,0.240476460754601,0.85381197895741,1.19885765749278,0.288180834308212,0,0,0.14405479798815,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0,0,0.13480708770837,0,0,0,0,0.321506296930038,0.137539436597234,0,0,0,0,0,0,0.157363764404994,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.901545653983311,1.90402606084398,0.813741466409323,0,0.429642228169954,0.928067519756987,0,0,0,0,0,0,0.428883182749851,0.260994291965212,0.680117776536817,3.00979216620984,0,0.537266523244462,1.85280868296583,1.31570429747224,0.176689145945881,1.54331230616732,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.633936370075881,0,0,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0,0.550285795565037,0.115525666150338,0,0,0,0,0,0,0.523813388962845,0,0.591424344868181,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0.266107110487916,0,0,0,0,0,0.222462803784138,0,0,0.560544326627578,0,1.07963795609311,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0.335566295393377,0.392600934460972,0.731507549893617,0,0,0,0,0,0,0,0.11294608203896,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0.535661815816973,0,0.320965466756673,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0.203977659483963,0.26721740526556,0,0,0,0,0,0,0.639701945702943,0.23806443146374,0.129177819672012,0,0,0,0,0,0,0,0,0,0.325613074443898,0.106727345877715,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p1@ENST00000405746 | |||
}} | }} |
Latest revision as of 02:59, 31 July 2015
Short description: | p1@ENST00000405746 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000405746_5end |
Coexpression cluster: | NA |
Association with transcript: | -60bp_to_ENST00000405746_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 8.67e-14 | 4 |
urothelial cell | 8.67e-14 | 4 |
amniotic epithelial cell | 1.14e-12 | 2 |
mesangial cell | 2.88e-12 | 2 |
kidney interstitial cell | 2.88e-12 | 2 |
juxtaglomerular complex cell | 2.88e-12 | 2 |
renal interstitial pericyte | 2.88e-12 | 2 |
extraglomerular mesangial cell | 2.88e-12 | 2 |
epithelial cell | 3.33e-12 | 253 |
corneal epithelial cell | 4.30e-12 | 2 |
kidney cell | 1.53e-11 | 17 |
kidney epithelial cell | 1.53e-11 | 17 |
extraembryonic cell | 1.28e-10 | 19 |
epithelial cell of nephron | 2.09e-09 | 15 |
kidney tubule cell | 2.80e-09 | 10 |
nephron tubule epithelial cell | 2.80e-09 | 10 |
glomerular cell | 5.77e-08 | 7 |
kidney corpuscule cell | 5.77e-08 | 7 |
kidney cortical cell | 9.68e-08 | 12 |
renal cortical epithelial cell | 9.68e-08 | 12 |
respiratory epithelial cell | 2.20e-07 | 13 |