FFCP PHASE1:Hg19::chr6:82462885..82462911,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:82462885..82462911,-
|short_description=p22@FAM46A
|description=CAGE_peak_22_at_FAM46A_5end
|association_with_transcript=-394bp_to_ENST00000369756_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55603 | |EntrezGene=55603 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18345 | |HGNC=18345 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IP4 | |UniProt=Q96IP4 | ||
|association_with_transcript=-394bp_to_ENST00000369756_5end | |||
|cluster_id=chr6:82462885..82462911,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_22_at_FAM46A_5end | |||
|id=chr6:82462885..82462911,- | |||
|ontology_enrichment_celltype=CL:0002057!3.22e-24!42;CL:0000860!2.88e-22!45;CL:0000766!7.55e-21!76;CL:0000839!2.86e-19!70;CL:0000557!6.44e-19!71;CL:0002194!6.94e-16!63;CL:0000576!6.94e-16!63;CL:0000040!6.94e-16!63;CL:0000559!6.94e-16!63;CL:0002009!3.01e-15!65;CL:0000763!3.77e-12!112;CL:0000049!3.77e-12!112;CL:0000738!2.08e-11!140;CL:0002031!1.85e-10!124;CL:0002087!7.45e-09!119;CL:0000037!4.63e-08!172;CL:0000566!4.63e-08!172;CL:0002032!6.58e-08!165;CL:0000837!6.58e-08!165;CL:0000988!2.86e-07!182;CL:0002274!4.94e-07!5;CL:0000457!4.94e-07!5;CL:0002191!4.94e-07!5;CL:0000097!4.94e-07!5;CL:0000831!4.94e-07!5;CL:0002028!4.94e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000097;8.09e-24;5!CL:0000163;1.02e-13;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,8.09e-24,5;CL:0002028,8.09e-24,5;CL:0000163,1.02e-13,9;CL:0000839,6.79e-11,66;CL:0000557,9.72e-11,67;CL:0000766,5.04e-10,72;CL:0000763,8.55e-07,108;CL:0000049,8.55e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.37e-29;1!UBERON:0007297;2.05e-15;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.81e-16!80;UBERON:0001474!4.83e-16!86;UBERON:0002390!8.25e-14!102;UBERON:0003061!8.25e-14!102;UBERON:0004765!8.82e-13!101;UBERON:0001434!8.82e-13!101;UBERON:0002193!4.94e-12!112;UBERON:0002405!1.64e-10!115;UBERON:0002133!8.59e-08!2;UBERON:0001905!9.19e-08!2;UBERON:0002757!9.19e-08!2;UBERON:0010134!9.19e-08!2;UBERON:0002784!9.19e-08!2;UBERON:0005408!9.19e-08!2;UBERON:0001899!9.19e-08!2;UBERON:0003081!1.09e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;2.37e-29;1!UBERON:0000996;2.37e-29;1!UBERON:0006868;2.37e-29;1!UBERON:0006947;9.90e-11;3!UBERON:0004054;9.90e-11;3!UBERON:0005904;2.26e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000996,1.33e-29,1;UBERON:0000998,1.78e-29,1;UBERON:0006868,1.78e-29,1;UBERON:0006947,8.99e-11,3;UBERON:0004054,8.99e-11,3;UBERON:0002371,1.61e-09,76;UBERON:0001474,7.51e-09,82;UBERON:0005904,2.11e-08,4;UBERON:0004765,4.28e-08,90;UBERON:0002405,7.62e-08,93;UBERON:0002390,1.85e-07,98;UBERON:0003061,1.85e-07,98;UBERON:0001434,2.57e-07,100;UBERON:0002193,8.55e-07,108 | |||
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| ||
|short_description=p22@FAM46A | |||
}} | }} |
Latest revision as of 23:15, 19 September 2015
Short description: | p22@FAM46A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_FAM46A_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -394bp_to_ENST00000369756_5end |
EntrezGene: | FAM46A |
HGNC: | 18345 |
UniProt: | Q96IP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 8.09e-24 | 5 |
basophil mast progenitor cell | 8.09e-24 | 5 |
endocrine cell | 1.02e-13 | 9 |
myeloid lineage restricted progenitor cell | 6.79e-11 | 66 |
granulocyte monocyte progenitor cell | 9.72e-11 | 67 |
myeloid leukocyte | 5.04e-10 | 72 |
myeloid cell | 8.55e-07 | 108 |
common myeloid progenitor | 8.55e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
vagina | 1.33e-29 | 1 |
seminal vesicle | 1.78e-29 | 1 |
seminal fluid secreting gland | 1.78e-29 | 1 |
male genital duct | 8.99e-11 | 3 |
internal male genitalia | 8.99e-11 | 3 |
bone marrow | 1.61e-09 | 76 |
bone element | 7.51e-09 | 82 |
duct of male reproductive system | 2.11e-08 | 4 |
skeletal element | 4.28e-08 | 90 |
immune system | 7.62e-08 | 93 |
hematopoietic system | 1.85e-07 | 98 |
blood island | 1.85e-07 | 98 |
skeletal system | 2.57e-07 | 100 |
hemolymphoid system | 8.55e-07 | 108 |