FFCP PHASE1:Hg19::chr7:131195804..131195897,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:131195804..131195897,+
|short_description=p@chr7:131195804..131195897,+
|description=CAGE_peak_at_chr7:131195804..131195897,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:131195804..131195897,+ | |||
|coexpression_cluster_id=C1090 | |||
|description=CAGE_peak_at_chr7:131195804..131195897,+ | |||
|id=chr7:131195804..131195897,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.12e-10!24;CL:0000213!2.07e-09!57;CL:0000215!2.07e-09!57;CL:0000071!1.37e-07!18;CL:0002546!1.37e-07!18;CL:0000066!1.56e-07!254;CL:0002078!8.57e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.99e-10;24!CL:0002322;1.52e-07;5!CL:0000115;2.65e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.09e-10,24;CL:0000213,7.63e-10,58;CL:0000215,7.63e-10,58;CL:0000115,8.07e-08,36;CL:0002078,1.14e-07,45;CL:0002322,1.56e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.14e-08!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.02e-12!115;UBERON:0005743!1.53e-11!86;UBERON:0001017!3.40e-11!82;UBERON:0000073!4.51e-10!94;UBERON:0001016!4.51e-10!94;UBERON:0000955!2.25e-09!69;UBERON:0006238!2.25e-09!69;UBERON:0001049!2.40e-09!57;UBERON:0005068!2.40e-09!57;UBERON:0006241!2.40e-09!57;UBERON:0007135!2.40e-09!57;UBERON:0002020!6.31e-08!34;UBERON:0003528!6.31e-08!34;UBERON:0003075!7.25e-08!86;UBERON:0007284!7.25e-08!86;UBERON:0002616!1.25e-07!59;UBERON:0001893!1.37e-07!34;UBERON:0001986!1.37e-07!18;UBERON:0004638!1.37e-07!18;UBERON:0004852!1.37e-07!18;UBERON:0000477!1.63e-07!286;UBERON:0003080!1.97e-07!42;UBERON:0000025!2.54e-07!194;UBERON:0002791!2.88e-07!33;UBERON:0002780!3.13e-07!41;UBERON:0001890!3.13e-07!41;UBERON:0006240!3.13e-07!41;UBERON:0002346!4.00e-07!90;UBERON:0001869!5.13e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.47e-07;9!UBERON:0001557;1.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.46e-09,81;UBERON:0001737,5.94e-08,9;UBERON:0001016,7.41e-08,89;UBERON:0000955,1.14e-07,68;UBERON:0006238,1.14e-07,68;UBERON:0001049,1.46e-07,56;UBERON:0005068,1.46e-07,56;UBERON:0006241,1.46e-07,56;UBERON:0007135,1.46e-07,56;UBERON:0003528,3.31e-07,34;UBERON:0002020,3.31e-07,34;UBERON:0000073,6.28e-07,53;UBERON:0002616,6.28e-07,53 | |||
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| ||
|short_description=p@chr7:131195804..131195897,+ | |||
}} | }} |
Latest revision as of 06:11, 31 July 2015
Short description: | p@chr7:131195804..131195897, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:131195804..131195897, + |
Coexpression cluster: | C1090_teratocarcinoma_Fibroblast_glioblastoma_kidney_H9_iPS_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.09e-10 | 24 |
lining cell | 7.63e-10 | 58 |
barrier cell | 7.63e-10 | 58 |
endothelial cell | 8.07e-08 | 36 |
meso-epithelial cell | 1.14e-07 | 45 |
embryonic stem cell | 1.56e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.46e-09 | 81 |
larynx | 5.94e-08 | 9 |
nervous system | 7.41e-08 | 89 |
brain | 1.14e-07 | 68 |
future brain | 1.14e-07 | 68 |
neural tube | 1.46e-07 | 56 |
neural rod | 1.46e-07 | 56 |
future spinal cord | 1.46e-07 | 56 |
neural keel | 1.46e-07 | 56 |
brain grey matter | 3.31e-07 | 34 |
gray matter | 3.31e-07 | 34 |
regional part of nervous system | 6.28e-07 | 53 |
regional part of brain | 6.28e-07 | 53 |