FFCP PHASE1:Hg19::chr3:160473403..160473426,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=151742 | |EntrezGene=151742 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=16381 | |HGNC=16381 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=13bp_to_ENST00000497343_5end | |association_with_transcript=13bp_to_ENST00000497343_5end | ||
|cluster_id=chr3:160473403..160473426,+ | |||
|coexpression_cluster_id=C4299 | |coexpression_cluster_id=C4299 | ||
|description=CAGE_peak_2_at_PPM1L_5end | |description=CAGE_peak_2_at_PPM1L_5end |
Latest revision as of 10:47, 16 September 2015
Short description: | p2@PPM1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPM1L_5end |
Coexpression cluster: | C4299_Dendritic_parietal_temporal_occipital_pituitary_gastrointestinal_cerebellum |
Association with transcript: | 13bp_to_ENST00000497343_5end |
EntrezGene: | PPM1L |
HGNC: | 16381 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@PPM1L |
---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 1.45e-14 | 61 |
monopoietic cell | 5.65e-14 | 59 |
monocyte | 5.65e-14 | 59 |
monoblast | 5.65e-14 | 59 |
promonocyte | 5.65e-14 | 59 |
granulocyte monocyte progenitor cell | 6.99e-14 | 67 |
nongranular leukocyte | 1.13e-13 | 115 |
myeloid lineage restricted progenitor cell | 5.11e-13 | 66 |
hematopoietic lineage restricted progenitor cell | 1.43e-12 | 120 |
defensive cell | 5.51e-12 | 48 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
adult organism | 1.43e-47 | 114 |
neural tube | 6.84e-25 | 56 |
neural rod | 6.84e-25 | 56 |
future spinal cord | 6.84e-25 | 56 |
neural keel | 6.84e-25 | 56 |
regional part of nervous system | 1.70e-23 | 53 |
regional part of brain | 1.70e-23 | 53 |
central nervous system | 1.28e-22 | 81 |
nervous system | 1.40e-21 | 89 |
regional part of forebrain | 3.82e-21 | 41 |
Showing 1 to 10 of 42 entries