FFCP PHASE1:Hg19::chr7:36192807..36192827,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:36192807..36192827,+
|short_description=p3@EEPD1
|description=CAGE_peak_3_at_EEPD1_5end
|association_with_transcript=-8bp_to_NM_030636,uc003tfa.2_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80820 | |EntrezGene=80820 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22223 | |HGNC=22223 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L9B9 | |UniProt=Q7L9B9 | ||
|association_with_transcript=-8bp_to_NM_030636,uc003tfa.2_5end | |||
|cluster_id=chr7:36192807..36192827,+ | |||
|description=CAGE_peak_3_at_EEPD1_5end | |||
|id=chr7:36192807..36192827,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.19e-17!42;CL:0000860!3.98e-14!45;CL:0000766!2.54e-12!76;CL:0002009!6.65e-12!65;CL:0002194!6.93e-12!63;CL:0000576!6.93e-12!63;CL:0000040!6.93e-12!63;CL:0000559!6.93e-12!63;CL:0000557!2.74e-10!71;CL:0000763!3.54e-10!112;CL:0000049!3.54e-10!112;CL:0000839!5.72e-09!70;CL:0000037!3.17e-07!172;CL:0000566!3.17e-07!172;CL:0000738!7.91e-07!140;CL:0000988!8.44e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.92e-17;33!CL:0002057;1.92e-17;33!CL:0000473;8.44e-15;39!CL:0000234;8.44e-15;39!CL:0000576;2.16e-14;48!CL:0000766;3.95e-12;69!CL:0000763;6.91e-08;100!CL:0000094;3.04e-07;8!CL:0002393;6.82e-07;6!CL:0002397;6.82e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.72e-26,42;CL:0002057,3.72e-26,42;CL:0000473,1.38e-25,48;CL:0000234,1.38e-25,48;CL:0000766,1.91e-22,72;CL:0000763,3.42e-21,108;CL:0000049,3.42e-21,108;CL:0002009,3.22e-20,61;CL:0002194,3.44e-20,59;CL:0000576,3.44e-20,59;CL:0000040,3.44e-20,59;CL:0000559,3.44e-20,59;CL:0000557,2.18e-18,67;CL:0000839,1.71e-16,66;CL:0000037,1.75e-14,168;CL:0000988,4.44e-13,177;CL:0000738,3.73e-12,136;CL:0002032,8.61e-12,161;CL:0000837,8.61e-12,161;CL:0002393,3.86e-09,9;CL:0002397,3.86e-09,9;CL:0002087,5.79e-09,115;CL:0002031,2.21e-07,120;CL:0000094,4.52e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.49e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.21e-15!115;UBERON:0002390!3.23e-14!102;UBERON:0003061!3.23e-14!102;UBERON:0002193!1.21e-11!112;UBERON:0002371!1.77e-10!80;UBERON:0001017!2.11e-10!82;UBERON:0005743!2.62e-10!86;UBERON:0000073!2.99e-10!94;UBERON:0001016!2.99e-10!94;UBERON:0001049!2.62e-09!57;UBERON:0005068!2.62e-09!57;UBERON:0006241!2.62e-09!57;UBERON:0007135!2.62e-09!57;UBERON:0001474!3.30e-09!86;UBERON:0003080!2.02e-08!42;UBERON:0001893!3.30e-08!34;UBERON:0002780!4.30e-08!41;UBERON:0001890!4.30e-08!41;UBERON:0006240!4.30e-08!41;UBERON:0000955!4.53e-08!69;UBERON:0006238!4.53e-08!69;UBERON:0002791!7.38e-08!33;UBERON:0002020!1.80e-07!34;UBERON:0003528!1.80e-07!34;UBERON:0002616!1.99e-07!59;UBERON:0001869!2.45e-07!32;UBERON:0002405!6.05e-07!115;UBERON:0003075!7.56e-07!86;UBERON:0007284!7.56e-07!86;UBERON:0002346!8.17e-07!90;UBERON:0004765!9.79e-07!101;UBERON:0001434!9.79e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.53e-24,98;UBERON:0003061,5.53e-24,98;UBERON:0002193,8.99e-20,108;UBERON:0002371,3.85e-18,76;UBERON:0001474,1.24e-15,82;UBERON:0002405,5.18e-15,93;UBERON:0004765,1.88e-13,90;UBERON:0001434,3.13e-11,100;UBERON:0007023,8.37e-11,114;UBERON:0001049,5.23e-07,56;UBERON:0005068,5.23e-07,56;UBERON:0006241,5.23e-07,56;UBERON:0007135,5.23e-07,56 | |||
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| ||
|short_description=p3@EEPD1 | |||
}} | }} |
Latest revision as of 09:45, 18 September 2015
Short description: | p3@EEPD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EEPD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_NM_030636, uc003tfa.2_5end |
EntrezGene: | EEPD1 |
HGNC: | 22223 |
UniProt: | Q7L9B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.72e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.72e-26 | 42 |
defensive cell | 1.38e-25 | 48 |
phagocyte | 1.38e-25 | 48 |
myeloid leukocyte | 1.91e-22 | 72 |
myeloid cell | 3.42e-21 | 108 |
common myeloid progenitor | 3.42e-21 | 108 |
macrophage dendritic cell progenitor | 3.22e-20 | 61 |
monopoietic cell | 3.44e-20 | 59 |
monocyte | 3.44e-20 | 59 |
monoblast | 3.44e-20 | 59 |
promonocyte | 3.44e-20 | 59 |
granulocyte monocyte progenitor cell | 2.18e-18 | 67 |
myeloid lineage restricted progenitor cell | 1.71e-16 | 66 |
hematopoietic stem cell | 1.75e-14 | 168 |
hematopoietic cell | 4.44e-13 | 177 |
leukocyte | 3.73e-12 | 136 |
hematopoietic oligopotent progenitor cell | 8.61e-12 | 161 |
hematopoietic multipotent progenitor cell | 8.61e-12 | 161 |
intermediate monocyte | 3.86e-09 | 9 |
CD14-positive, CD16-positive monocyte | 3.86e-09 | 9 |
nongranular leukocyte | 5.79e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 2.21e-07 | 120 |
granulocyte | 4.52e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.53e-24 | 98 |
blood island | 5.53e-24 | 98 |
hemolymphoid system | 8.99e-20 | 108 |
bone marrow | 3.85e-18 | 76 |
bone element | 1.24e-15 | 82 |
immune system | 5.18e-15 | 93 |
skeletal element | 1.88e-13 | 90 |
skeletal system | 3.13e-11 | 100 |
adult organism | 8.37e-11 | 114 |
neural tube | 5.23e-07 | 56 |
neural rod | 5.23e-07 | 56 |
future spinal cord | 5.23e-07 | 56 |
neural keel | 5.23e-07 | 56 |