FFCP PHASE1:Hg19::chr7:47577036..47577094,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:47577036..47577094,-
|short_description=p@chr7:47577036..47577094,-
|description=CAGE_peak_at_chr7:47577036..47577094,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:47577036..47577094,- | |||
|coexpression_cluster_id=C4689 | |||
|description=CAGE_peak_at_chr7:47577036..47577094,- | |||
|id=chr7:47577036..47577094,- | |||
|ontology_enrichment_celltype=CL:0000055!4.69e-08!180 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.81e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,8.74e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!2.07e-21!365;UBERON:0000481!4.87e-15!347;UBERON:0000468!4.99e-15!659;UBERON:0000062!5.72e-15!511;UBERON:0000153!1.88e-13!129;UBERON:0007811!1.88e-13!129;UBERON:0000033!3.06e-13!123;UBERON:0000064!4.48e-13!219;UBERON:0000467!2.53e-11!625;UBERON:0003075!3.36e-11!86;UBERON:0007284!3.36e-11!86;UBERON:0000480!3.89e-11!626;UBERON:0004121!5.80e-11!169;UBERON:0005743!1.42e-10!86;UBERON:0000924!2.86e-10!173;UBERON:0006601!2.86e-10!173;UBERON:0002346!3.96e-10!90;UBERON:0000073!3.03e-09!94;UBERON:0001016!3.03e-09!94;UBERON:0001017!1.02e-08!82;UBERON:0003056!1.64e-08!61;UBERON:0005631!1.85e-08!14;UBERON:0000158!1.85e-08!14;UBERON:0000922!3.25e-08!612;UBERON:0007023!3.69e-08!115;UBERON:0004923!3.73e-08!57;UBERON:0002616!4.48e-08!59;UBERON:0001049!4.53e-08!57;UBERON:0005068!4.53e-08!57;UBERON:0006241!4.53e-08!57;UBERON:0007135!4.53e-08!57;UBERON:0000955!1.11e-07!69;UBERON:0006238!1.11e-07!69;UBERON:0002050!2.89e-07!605;UBERON:0005423!2.89e-07!605;UBERON:0000923!5.11e-07!604;UBERON:0005291!5.11e-07!604;UBERON:0006598!5.11e-07!604;UBERON:0002532!5.11e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.07e-08;11!UBERON:0002104;4.65e-07;21!UBERON:0001456;5.73e-07;21!UBERON:0000970;9.58e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,4.56e-12,82;UBERON:0007284,4.56e-12,82;UBERON:0002346,8.24e-11,86;UBERON:0003056,8.95e-11,61;UBERON:0010371,1.24e-09,104;UBERON:0005631,7.34e-09,14;UBERON:0000158,7.34e-09,14;UBERON:0001049,1.67e-08,56;UBERON:0005068,1.67e-08,56;UBERON:0006241,1.67e-08,56;UBERON:0007135,1.67e-08,56;UBERON:0004121,3.12e-08,171;UBERON:0000924,3.12e-08,171;UBERON:0006601,3.12e-08,171;UBERON:0010314,3.84e-08,132;UBERON:0000955,4.30e-08,68;UBERON:0006238,4.30e-08,68;UBERON:0000073,5.19e-08,53;UBERON:0002616,5.19e-08,53;UBERON:0007625,6.39e-08,11;UBERON:0001017,2.30e-07,81;UBERON:0001456,3.65e-07,22;UBERON:0002417,4.98e-07,60;UBERON:0000916,4.98e-07,60;UBERON:0000970,5.01e-07,21;UBERON:0002104,5.01e-07,21 | |||
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| ||
|short_description=p@chr7:47577036..47577094,- | |||
}} | }} |
Latest revision as of 10:31, 31 July 2015
Short description: | p@chr7:47577036..47577094, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:47577036..47577094, - |
Coexpression cluster: | C4689_Retinal_renal_Osteoblast_retina_Ciliary_Hepatocyte_glioblastoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 8.74e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
neural plate | 4.56e-12 | 82 |
presumptive neural plate | 4.56e-12 | 82 |
neurectoderm | 8.24e-11 | 86 |
pre-chordal neural plate | 8.95e-11 | 61 |
ecto-epithelium | 1.24e-09 | 104 |
extraembryonic membrane | 7.34e-09 | 14 |
membranous layer | 7.34e-09 | 14 |
neural tube | 1.67e-08 | 56 |
neural rod | 1.67e-08 | 56 |
future spinal cord | 1.67e-08 | 56 |
neural keel | 1.67e-08 | 56 |
ectoderm-derived structure | 3.12e-08 | 171 |
ectoderm | 3.12e-08 | 171 |
presumptive ectoderm | 3.12e-08 | 171 |
structure with developmental contribution from neural crest | 3.84e-08 | 132 |
brain | 4.30e-08 | 68 |
future brain | 4.30e-08 | 68 |
regional part of nervous system | 5.19e-08 | 53 |
regional part of brain | 5.19e-08 | 53 |
pigment epithelium of eye | 6.39e-08 | 11 |
central nervous system | 2.30e-07 | 81 |
face | 3.65e-07 | 22 |
abdominal segment of trunk | 4.98e-07 | 60 |
abdomen | 4.98e-07 | 60 |
eye | 5.01e-07 | 21 |
visual system | 5.01e-07 | 21 |