FFCP PHASE1:Hg19::chr10:64502650..64502660,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:64502650..64502660,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:64502650..64502660,+ | |||
|id=chr10:64502650..64502660,+ | |||
|ontology_enrichment_celltype=CL:0002057!7.40e-124!42;CL:0000860!4.31e-115!45;CL:0002194!2.46e-88!63;CL:0000576!2.46e-88!63;CL:0000040!2.46e-88!63;CL:0000559!2.46e-88!63;CL:0002009!2.03e-85!65;CL:0000839!7.58e-79!70;CL:0000557!1.22e-77!71;CL:0000766!2.97e-76!76;CL:0002087!3.09e-54!119;CL:0000763!2.15e-49!112;CL:0000049!2.15e-49!112;CL:0000738!1.96e-47!140;CL:0002031!2.17e-46!124;CL:0000037!4.20e-37!172;CL:0000566!4.20e-37!172;CL:0002032!6.58e-35!165;CL:0000837!6.58e-35!165;CL:0000988!1.30e-34!182;CL:0000134!2.13e-14!358;CL:0002320!5.91e-14!365;CL:0000219!2.16e-12!390;CL:0000034!9.77e-11!444;CL:0000048!1.61e-10!430;CL:0000723!2.98e-10!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.52e-125;33!CL:0002057;3.52e-125;33!CL:0000473;6.17e-85;39!CL:0000234;6.17e-85;39!CL:0000576;1.79e-54;48!CL:0000766;4.05e-34;69!CL:0002087;1.24e-13;104!CL:0000763;3.51e-13;100!CL:0000738;9.01e-09;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.04e-105,42;CL:0002057,1.04e-105,42;CL:0000473,3.92e-92,48;CL:0000234,3.92e-92,48;CL:0002194,4.05e-73,59;CL:0000576,4.05e-73,59;CL:0000040,4.05e-73,59;CL:0000559,4.05e-73,59;CL:0002009,1.15e-70,61;CL:0000839,3.62e-65,66;CL:0000557,3.64e-64,67;CL:0000766,1.45e-59,72;CL:0000763,7.07e-39,108;CL:0000049,7.07e-39,108;CL:0002087,2.42e-36,115;CL:0002031,1.04e-34,120;CL:0000738,2.76e-30,136;CL:0002032,4.08e-25,161;CL:0000837,4.08e-25,161;CL:0000037,6.09e-24,168;CL:0000988,1.45e-22,177;CL:0000134,1.30e-09,354;CL:0002320,2.34e-09,361;CL:0000219,1.85e-08,386;CL:0000048,2.34e-07,427;CL:0000723,3.32e-07,433;CL:0000034,5.23e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;5.76e-76;42!CL:0000049;4.73e-11;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.91e-68!80;UBERON:0001474!6.90e-63!86;UBERON:0002390!2.51e-61!102;UBERON:0003061!2.51e-61!102;UBERON:0002193!3.59e-55!112;UBERON:0004765!1.82e-52!101;UBERON:0001434!1.82e-52!101;UBERON:0002405!7.63e-48!115;UBERON:0002204!1.06e-28!167;UBERON:0003081!9.62e-25!216;UBERON:0002384!2.38e-13!375;UBERON:0000926!5.63e-09!448;UBERON:0004120!5.63e-09!448;UBERON:0006603!5.63e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-56,76;UBERON:0001474,5.06e-52,82;UBERON:0004765,3.52e-47,90;UBERON:0002405,1.41e-45,93;UBERON:0002390,4.06e-43,98;UBERON:0003061,4.06e-43,98;UBERON:0001434,3.34e-42,100;UBERON:0002193,7.07e-39,108;UBERON:0002204,4.20e-24,167;UBERON:0003081,2.86e-19,203;UBERON:0000926,3.11e-11,315;UBERON:0004120,3.11e-11,315;UBERON:0006603,3.11e-11,315;UBERON:0002384,5.20e-09,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0.200544447470142,0.434021741431704,0,0,0,0.290796477559129,0.377875943688809,0.727752183563449,2.09186133215116,1.23350366406548,5.57471467611186,6.61692502340946,8.70946402198942,18.2091317014211,3.7922024881028,2.5819387343353,6.77132432971709,1.50593871634084,0.818718450173537,3.82029923556644,1.22433556948361,4.17207735198922,5.11469700639233,0.989553900560148,1.99463657621632,3.40979800426155,0.290209238628584,3.97169657283798,1.86846674698672,7.78870862295904,4.69334626578181,14.986030284653,0.605399502633369,2.20966581592539,4.1140110367315,0,0.212604299965044,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:64502650..64502660,+ | |||
}} |
Latest revision as of 14:42, 23 July 2015
Short description: | p@chr10:64502650..64502660, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64502650..64502660, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.04e-105 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.04e-105 | 42 |
defensive cell | 3.92e-92 | 48 |
phagocyte | 3.92e-92 | 48 |
monopoietic cell | 4.05e-73 | 59 |
monocyte | 4.05e-73 | 59 |
monoblast | 4.05e-73 | 59 |
promonocyte | 4.05e-73 | 59 |
macrophage dendritic cell progenitor | 1.15e-70 | 61 |
myeloid lineage restricted progenitor cell | 3.62e-65 | 66 |
granulocyte monocyte progenitor cell | 3.64e-64 | 67 |
myeloid leukocyte | 1.45e-59 | 72 |
myeloid cell | 7.07e-39 | 108 |
common myeloid progenitor | 7.07e-39 | 108 |
nongranular leukocyte | 2.42e-36 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-34 | 120 |
leukocyte | 2.76e-30 | 136 |
hematopoietic oligopotent progenitor cell | 4.08e-25 | 161 |
hematopoietic multipotent progenitor cell | 4.08e-25 | 161 |
hematopoietic stem cell | 6.09e-24 | 168 |
hematopoietic cell | 1.45e-22 | 177 |
mesenchymal cell | 1.30e-09 | 354 |
connective tissue cell | 2.34e-09 | 361 |
motile cell | 1.85e-08 | 386 |
multi fate stem cell | 2.34e-07 | 427 |
somatic stem cell | 3.32e-07 | 433 |
stem cell | 5.23e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-56 | 76 |
bone element | 5.06e-52 | 82 |
skeletal element | 3.52e-47 | 90 |
immune system | 1.41e-45 | 93 |
hematopoietic system | 4.06e-43 | 98 |
blood island | 4.06e-43 | 98 |
skeletal system | 3.34e-42 | 100 |
hemolymphoid system | 7.07e-39 | 108 |
musculoskeletal system | 4.20e-24 | 167 |
lateral plate mesoderm | 2.86e-19 | 203 |
mesoderm | 3.11e-11 | 315 |
mesoderm-derived structure | 3.11e-11 | 315 |
presumptive mesoderm | 3.11e-11 | 315 |
connective tissue | 5.20e-09 | 371 |