FFCP PHASE1:Hg19::chr11:3860586..3860599,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:3860586..3860599,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr11:3860586..3860599,+ | |||
|id=chr11:3860586..3860599,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.13e-69!42;CL:0000860!3.38e-64!45;CL:0000037!1.44e-56!172;CL:0000566!1.44e-56!172;CL:0000738!5.34e-56!140;CL:0002032!5.07e-54!165;CL:0000837!5.07e-54!165;CL:0000988!6.00e-54!182;CL:0000766!1.50e-53!76;CL:0000763!1.43e-51!112;CL:0000049!1.43e-51!112;CL:0002009!4.27e-45!65;CL:0002087!1.94e-44!119;CL:0002031!1.07e-43!124;CL:0000557!2.41e-42!71;CL:0002194!1.70e-41!63;CL:0000576!1.70e-41!63;CL:0000040!1.70e-41!63;CL:0000559!1.70e-41!63;CL:0000839!2.88e-40!70;CL:0002393!7.12e-19!9;CL:0002397!7.12e-19!9;CL:0000094!5.45e-18!8;CL:0000134!7.02e-17!358;CL:0002320!3.48e-16!365;CL:0000219!9.58e-14!390;CL:0000081!1.33e-12!11;CL:0000048!7.36e-11!430;CL:0000723!1.87e-10!436;CL:0000034!6.25e-10!444;CL:0000775!2.46e-08!3;CL:0000842!2.63e-07!3;CL:0000623!3.62e-07!3;CL:0000825!3.62e-07!3;CL:0000875!4.86e-07!3;CL:0002396!4.86e-07!3;CL:0000767!6.51e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000094;5.77e-33;8!CL:0000081;7.35e-24;11!CL:0000775;4.02e-23;3!CL:0000771;3.82e-16;2!CL:0001014;1.73e-15;2!CL:0001016;1.73e-15;2!CL:0000766;1.45e-14;69!CL:0002393;1.56e-11;6!CL:0002397;1.56e-11;6!CL:0000576;2.27e-10;48!CL:0000226;2.37e-10;3!CL:0000842;2.37e-10;3!CL:0000860;7.91e-09;33!CL:0002057;7.91e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.95e-33,8;CL:0000766,2.49e-25,72;CL:0000081,5.60e-24,11;CL:0000775,3.61e-23,3;CL:0000738,2.47e-21,136;CL:0000763,2.56e-20,108;CL:0000049,2.56e-20,108;CL:0000860,1.47e-18,42;CL:0002057,1.47e-18,42;CL:0002009,5.33e-17,61;CL:0000037,1.59e-16,168;CL:0000771,3.83e-16,2;CL:0000473,5.30e-16,48;CL:0000234,5.30e-16,48;CL:0001014,1.67e-15,2;CL:0001016,1.67e-15,2;CL:0000988,1.75e-15,177;CL:0000557,2.75e-15,67;CL:0002032,5.05e-14,161;CL:0000837,5.05e-14,161;CL:0002393,5.16e-13,9;CL:0002397,5.16e-13,9;CL:0002194,2.02e-12,59;CL:0000576,2.02e-12,59;CL:0000040,2.02e-12,59;CL:0000559,2.02e-12,59;CL:0000839,6.34e-11,66;CL:0000226,4.00e-10,3;CL:0000842,4.00e-10,3;CL:0002087,2.78e-09,115;CL:0002031,7.15e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;9.41e-14;42!CL:0000049;4.25e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.24e-52!102;UBERON:0003061!3.24e-52!102;UBERON:0002193!3.89e-46!112;UBERON:0002371!3.27e-36!80;UBERON:0001474!7.76e-33!86;UBERON:0004765!3.64e-26!101;UBERON:0001434!3.64e-26!101;UBERON:0002405!6.07e-24!115;UBERON:0000178!3.13e-19!15;UBERON:0000179!3.13e-19!15;UBERON:0000463!3.13e-19!15;UBERON:0003081!2.14e-17!216;UBERON:0002384!3.08e-15!375;UBERON:0002204!2.60e-11!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.82e-22;15!UBERON:0000179;1.82e-22;15!UBERON:0000463;1.82e-22;15!UBERON:0002390;9.95e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.73e-25,98;UBERON:0003061,5.73e-25,98;UBERON:0000178,2.12e-22,15;UBERON:0000179,2.12e-22,15;UBERON:0000463,2.12e-22,15;UBERON:0002193,2.46e-22,108;UBERON:0002371,3.21e-13,76;UBERON:0001474,4.31e-12,82;UBERON:0004765,8.09e-11,90;UBERON:0002405,2.14e-10,93;UBERON:0003081,3.60e-10,203;UBERON:0001434,1.64e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,0,0,0,2.76997704265939,4.8130667392834,0.651032612147555,0,0,0,0.726991193897824,0.755751887377619,0.727752183563449,0.697287110717054,1.23350366406548,0.929119112685311,0.863077176966451,0.768482119587302,0.236482229888585,0.689491361473237,0,1.35426486594342,1.12945403725563,1.91034305040492,0.674170453335254,0.918251677112708,0.641858054152187,0,0.659702600373432,0.598390972864896,1.27867425159808,0.580418477257168,0.56738522469114,0,0.502497330513487,1.5644487552606,0.65156653411535,0.605399502633369,0.368277635987565,1.58231193720442,0.845021145247767,1.06302149982522,0.628975936525128,0.786300418025466,0.600707571366025,0.48217676009124,1.42506371870624,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0.786839080455332,0,0.205601498999509,0.167186495390678,0.32592226663359,0.473447805734733,0,0,0,0,0.812411591295047,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0,0.506039384039006,0,0,0,0.301150238155546,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6273001846552,7.75560528296651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,1.07813787429759,0.77005821767849,0,0,0,0,0,20.9721966705211,2.99161459204025,22.7928532389819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,1.06727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,1.52927441428475,1.13929437434833,0.952927101831156,0.822724546172388,2.59389324477087,1.62009431171434,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0,0,0,0.19538809540204,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,1.349843349309,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:3860586..3860599,+ | |||
}} |
Latest revision as of 22:06, 23 July 2015
Short description: | p@chr11:3860586..3860599, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:3860586..3860599, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.73e-25 | 98 |
blood island | 5.73e-25 | 98 |
blood | 2.12e-22 | 15 |
haemolymphatic fluid | 2.12e-22 | 15 |
organism substance | 2.12e-22 | 15 |
hemolymphoid system | 2.46e-22 | 108 |
bone marrow | 3.21e-13 | 76 |
bone element | 4.31e-12 | 82 |
skeletal element | 8.09e-11 | 90 |
immune system | 2.14e-10 | 93 |
lateral plate mesoderm | 3.60e-10 | 203 |
skeletal system | 1.64e-09 | 100 |