FFCP PHASE1:Hg19::chr12:10306138..10306164,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:10306138..10306164,+ | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_at_chr12:10306138..10306164,+ | |||
|id=chr12:10306138..10306164,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.35e-48!42;CL:0000860!6.64e-44!45;CL:0000766!3.90e-39!76;CL:0002194!3.26e-36!63;CL:0000576!3.26e-36!63;CL:0000040!3.26e-36!63;CL:0000559!3.26e-36!63;CL:0002009!8.71e-35!65;CL:0000839!1.28e-33!70;CL:0000557!5.50e-31!71;CL:0000763!3.22e-24!112;CL:0000049!3.22e-24!112;CL:0000738!4.75e-22!140;CL:0002087!1.14e-20!119;CL:0002031!1.05e-16!124;CL:0000037!1.38e-16!172;CL:0000566!1.38e-16!172;CL:0000988!5.46e-15!182;CL:0002032!1.35e-14!165;CL:0000837!1.35e-14!165;CL:0002393!1.61e-09!9;CL:0002397!1.61e-09!9;CL:0000842!1.89e-08!3;CL:0000767!4.75e-08!3;CL:0000094!1.07e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.83e-38;33!CL:0002057;9.83e-38;33!CL:0000576;5.35e-28;48!CL:0000473;2.35e-25;39!CL:0000234;2.35e-25;39!CL:0000771;1.36e-19;2!CL:0000094;1.92e-18;8!CL:0000766;1.13e-17;69!CL:0002393;1.05e-14;6!CL:0002397;1.05e-14;6!CL:0000226;1.41e-13;3!CL:0000842;1.41e-13;3!CL:0000081;1.76e-13;11!CL:0000767;7.40e-13;3!CL:0000763;6.17e-10;100!CL:0000738;4.29e-08;136!CL:0002087;8.77e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.89e-46,42;CL:0002057,6.89e-46,42;CL:0000766,7.74e-42,72;CL:0000473,7.31e-40,48;CL:0000234,7.31e-40,48;CL:0002194,2.02e-31,59;CL:0000576,2.02e-31,59;CL:0000040,2.02e-31,59;CL:0000559,2.02e-31,59;CL:0002009,2.49e-30,61;CL:0000839,6.88e-28,66;CL:0000557,1.92e-27,67;CL:0000763,4.34e-27,108;CL:0000049,4.34e-27,108;CL:0000738,2.95e-26,136;CL:0000037,1.03e-20,168;CL:0002087,6.70e-20,115;CL:0000771,1.24e-19,2;CL:0000988,1.64e-19,177;CL:0000094,1.53e-18,8;CL:0002032,2.87e-17,161;CL:0000837,2.87e-17,161;CL:0002031,2.39e-14,120;CL:0000081,1.49e-13,11;CL:0000226,1.51e-13,3;CL:0000842,1.51e-13,3;CL:0000767,5.81e-13,3;CL:0002393,5.09e-10,9;CL:0002397,5.09e-10,9;CL:0000134,2.93e-09,354;CL:0002320,5.13e-09,361;CL:0000219,3.71e-08,386;CL:0000048,4.21e-07,427;CL:0000723,5.89e-07,433;CL:0000034,9.09e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.81e-36;42!CL:0000049;1.15e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.06e-28!80;UBERON:0001474!1.98e-25!86;UBERON:0002390!1.77e-24!102;UBERON:0003061!1.77e-24!102;UBERON:0002193!2.70e-21!112;UBERON:0004765!4.01e-20!101;UBERON:0001434!4.01e-20!101;UBERON:0002405!1.91e-16!115;UBERON:0002204!1.48e-14!167;UBERON:0003081!2.90e-07!216;UBERON:0006331!9.57e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.92e-24,76;UBERON:0002390,8.74e-24,98;UBERON:0003061,8.74e-24,98;UBERON:0001474,4.78e-22,82;UBERON:0002193,2.36e-21,108;UBERON:0004765,6.79e-20,90;UBERON:0002405,3.51e-19,93;UBERON:0001434,1.11e-17,100;UBERON:0003081,4.18e-10,203;UBERON:0002204,1.25e-09,167;UBERON:0002384,1.10e-08,371 | |||
|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,1.23852898652861,0,0,0,0,0,0,4.9859586767869,5.81578897663411,2.82114131930607,0,0,0.257575567634187,2.03557534291391,0.755751887377619,1.4555043671269,1.16214518452842,0.822335776043652,1.54853185447552,0.575384784644301,1.0246428261164,1.41889337933151,0.689491361473237,0,0,2.07066573496865,1.09162460023138,0.674170453335254,0.918251677112708,0.320929027076094,1.91801137739712,0.989553900560148,1.39624560335142,2.13112375266347,0.290209238628584,0,0,0,0.521482918420201,0,0,0.368277635987565,0,0.845021145247767,0.637812899895131,0.419317291016752,1.12328631146495,0.901061357049038,0.32145117339416,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54889657470352,4.96142661882819,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0.255897791311334,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.321506296930038,0.825236619583403,0.415440338029185,0,0,0,0,0,0.104909176269996,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0.36757959813938,0,0,0,0,0.103432995861895,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:10306138..10306164,+ | |||
}} |
Latest revision as of 04:08, 24 July 2015
Short description: | p@chr12:10306138..10306164, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:10306138..10306164, + |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.92e-24 | 76 |
hematopoietic system | 8.74e-24 | 98 |
blood island | 8.74e-24 | 98 |
bone element | 4.78e-22 | 82 |
hemolymphoid system | 2.36e-21 | 108 |
skeletal element | 6.79e-20 | 90 |
immune system | 3.51e-19 | 93 |
skeletal system | 1.11e-17 | 100 |
lateral plate mesoderm | 4.18e-10 | 203 |
musculoskeletal system | 1.25e-09 | 167 |
connective tissue | 1.10e-08 | 371 |