FFCP PHASE1:Hg19::chr12:3157341..3157355,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:3157341..3157355,+ | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_at_chr12:3157341..3157355,+ | |||
|id=chr12:3157341..3157355,+ | |||
|ontology_enrichment_celltype=CL:0002139!6.31e-23!24;CL:0000071!1.36e-17!18;CL:0002546!1.36e-17!18;CL:0002543!1.43e-17!6;CL:0000115!7.07e-15!35;CL:0002144!1.25e-13!3;CL:0002618!2.87e-13!3;CL:0002078!2.69e-11!44;CL:0000213!3.84e-08!57;CL:0000215!3.84e-08!57;CL:0005020!7.02e-07!6;CL:0002138!7.02e-07!6;CL:0005022!7.02e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002144;1.12e-22;3!CL:0002032;5.72e-18;1!CL:0000557;5.72e-18;1!CL:0000071;8.76e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,1.00e-22,3;CL:0000071,8.08e-09,18;CL:0002546,8.08e-09,18;CL:0002139,9.50e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0004140;2.66e-18;1!UBERON:0010227;3.16e-18;1!UBERON:0010226;5.72e-18;1!CL:0002546;8.76e-09;18 | |||
|ontology_enrichment_disease=DOID:114!1.89e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:9119;3.75e-18;1!DOID:114;1.17e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,3.75e-18,1;DOID:114,1.33e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001986!1.36e-17!18;UBERON:0004638!1.36e-17!18;UBERON:0004852!1.36e-17!18;UBERON:0000487!4.41e-14!22;UBERON:0001915!1.25e-13!3;UBERON:0001982!1.25e-13!3;UBERON:0006914!3.46e-12!25;UBERON:0001638!1.30e-11!9;UBERON:0003920!1.30e-11!9;UBERON:0004582!1.30e-11!9;UBERON:0001009!3.43e-10!113;UBERON:0007023!5.10e-09!115;UBERON:0007100!6.59e-09!27;UBERON:0000055!8.29e-09!69;UBERON:0002066!3.95e-08!5;UBERON:0004872!6.81e-08!84;UBERON:0002049!2.58e-07!79;UBERON:0007798!2.58e-07!79;UBERON:0004535!3.49e-07!110;UBERON:0004151!6.40e-07!3;UBERON:0002465!8.83e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.78e-23;3!UBERON:0010523;1.12e-22;3!UBERON:0001915;1.12e-22;3!UBERON:0001982;1.12e-22;3!UBERON:0002079;3.16e-18;1!UBERON:0002084;5.72e-18;1!UBERON:0002082;5.72e-18;1!UBERON:0007100;9.85e-17;25!UBERON:0002081;8.69e-10;2!UBERON:0004638;8.76e-09;18!UBERON:0001986;8.76e-09;18!UBERON:0004852;8.76e-09;18!UBERON:0000948;1.71e-07;22!UBERON:0000487;2.75e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.35e-23,3;UBERON:0010523,1.00e-22,3;UBERON:0001915,1.00e-22,3;UBERON:0001982,1.00e-22,3;UBERON:0002079,3.16e-18,1;UBERON:0002084,4.44e-18,1;UBERON:0002082,4.44e-18,1;UBERON:0010226,4.44e-18,1;UBERON:0007100,1.78e-15,27;UBERON:0002081,8.69e-10,2;UBERON:0010227,8.69e-10,2;UBERON:0001009,6.87e-09,112;UBERON:0004638,8.08e-09,18;UBERON:0001986,8.08e-09,18;UBERON:0004852,8.08e-09,18;UBERON:0000487,2.58e-07,22;UBERON:0004872,5.25e-07,83;UBERON:0000948,6.35e-07,24;UBERON:0005498,6.35e-07,24;UBERON:0004140,6.35e-07,24;UBERON:0009881,6.35e-07,24;UBERON:0004141,6.35e-07,24;UBERON:0003084,6.35e-07,24;UBERON:0007005,6.35e-07,24;UBERON:0004139,6.35e-07,24;UBERON:0004291,6.35e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,1.52054421143703,1.22031028774085,0,0.81014194788176,0.535798369704479,0.898117490504679,0.450445921933289,0,1.89853131913626,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866198686566443,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9960795199673,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,1.16641845353302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,2.14613024068285,1.11585728720936,13.6382449148054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.00286728461357,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,2.3196288626764,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:3157341..3157355,+ | |||
}} |
Latest revision as of 08:06, 24 July 2015
Short description: | p@chr12:3157341..3157355, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:3157341..3157355, + |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 1.00e-22 | 3 |
blood vessel endothelial cell | 8.08e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.08e-09 | 18 |
endothelial cell of vascular tree | 9.50e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.35e-23 | 3 |
microcirculatory vessel | 1.00e-22 | 3 |
endothelium of capillary | 1.00e-22 | 3 |
capillary | 1.00e-22 | 3 |
left cardiac atrium | 3.16e-18 | 1 |
heart left ventricle | 4.44e-18 | 1 |
cardiac ventricle | 4.44e-18 | 1 |
future cardiac ventricle | 4.44e-18 | 1 |
primary circulatory organ | 1.78e-15 | 27 |
cardiac atrium | 8.69e-10 | 2 |
future cardiac atrium | 8.69e-10 | 2 |
circulatory system | 6.87e-09 | 112 |
blood vessel endothelium | 8.08e-09 | 18 |
endothelium | 8.08e-09 | 18 |
cardiovascular system endothelium | 8.08e-09 | 18 |
simple squamous epithelium | 2.58e-07 | 22 |
splanchnic layer of lateral plate mesoderm | 5.25e-07 | 83 |
heart | 6.35e-07 | 24 |
primitive heart tube | 6.35e-07 | 24 |
primary heart field | 6.35e-07 | 24 |
anterior lateral plate mesoderm | 6.35e-07 | 24 |
heart tube | 6.35e-07 | 24 |
heart primordium | 6.35e-07 | 24 |
cardiac mesoderm | 6.35e-07 | 24 |
cardiogenic plate | 6.35e-07 | 24 |
heart rudiment | 6.35e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 3.75e-18 | 1 |
heart disease | 1.33e-09 | 2 |