FFCP PHASE1:Hg19::chr12:69747643..69747652,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4069 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6740 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=499bp_to_AK130127_5end | |||
|cluster_id=chr12:69747643..69747652,+ | |||
|coexpression_cluster_id=C501 | |||
|description=CAGE_peak_10_at_LYZ_5end | |||
|id=chr12:69747643..69747652,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.14e-66!42;CL:0002194!3.57e-64!63;CL:0000576!3.57e-64!63;CL:0000040!3.57e-64!63;CL:0000559!3.57e-64!63;CL:0002009!8.41e-62!65;CL:0000860!1.95e-61!45;CL:0000766!1.59e-58!76;CL:0000557!2.33e-58!71;CL:0000839!1.85e-56!70;CL:0000763!1.75e-46!112;CL:0000049!1.75e-46!112;CL:0002087!1.38e-35!119;CL:0000037!1.39e-32!172;CL:0000566!1.39e-32!172;CL:0000738!2.23e-32!140;CL:0000988!6.86e-30!182;CL:0002032!3.83e-29!165;CL:0000837!3.83e-29!165;CL:0002031!6.18e-29!124;CL:0000134!3.06e-10!358;CL:0002320!9.61e-10!365;CL:0000219!5.16e-08!390;CL:0000842!4.91e-07!3;CL:0000767!7.50e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.08e-60;33!CL:0002057;3.08e-60;33!CL:0000473;4.14e-58;39!CL:0000234;4.14e-58;39!CL:0000576;2.74e-33;48!CL:0000766;3.37e-24;69!CL:0000763;3.65e-16;100!CL:0002087;9.35e-10;104!CL:0000235;7.48e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.37e-70,48;CL:0000234,2.37e-70,48;CL:0000860,1.44e-62,42;CL:0002057,1.44e-62,42;CL:0002194,3.35e-55,59;CL:0000576,3.35e-55,59;CL:0000040,3.35e-55,59;CL:0000559,3.35e-55,59;CL:0002009,3.02e-53,61;CL:0000557,4.34e-52,67;CL:0000839,7.22e-49,66;CL:0000766,2.10e-44,72;CL:0000763,5.84e-33,108;CL:0000049,5.84e-33,108;CL:0002087,2.84e-28,115;CL:0002031,1.28e-24,120;CL:0000738,4.49e-23,136;CL:0000037,6.29e-21,168;CL:0002032,2.77e-20,161;CL:0000837,2.77e-20,161;CL:0000988,1.44e-19,177;CL:0000235,6.56e-09,6;CL:0000134,7.62e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;5.21e-54;42!CL:0000049;1.42e-11;108!UBERON:0006298;4.82e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.23e-55!102;UBERON:0003061!6.23e-55!102;UBERON:0002371!1.26e-52!80;UBERON:0002193!1.52e-50!112;UBERON:0001474!5.30e-48!86;UBERON:0002405!1.70e-40!115;UBERON:0004765!7.69e-39!101;UBERON:0001434!7.69e-39!101;UBERON:0003081!7.37e-21!216;UBERON:0002204!3.40e-18!167;UBERON:0002384!1.36e-09!375;UBERON:0000926!1.32e-08!448;UBERON:0004120!1.32e-08!448;UBERON:0006603!1.32e-08!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.34e-12;2!UBERON:0001736;4.82e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.38e-45,76;UBERON:0001474,1.15e-41,82;UBERON:0002390,4.76e-40,98;UBERON:0003061,4.76e-40,98;UBERON:0004765,1.64e-37,90;UBERON:0002405,3.90e-36,93;UBERON:0002193,7.78e-36,108;UBERON:0001434,3.06e-33,100;UBERON:0003081,6.97e-18,203;UBERON:0002204,9.86e-18,167;UBERON:0003127,1.71e-12,2;UBERON:0000926,2.25e-09,315;UBERON:0004120,2.25e-09,315;UBERON:0006603,2.25e-09,315;UBERON:0001736,4.97e-07,1;UBERON:0006298,4.97e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,0.293600439334847,0.553995408531877,1.20326668482085,1.08505435357926,0.223915474239924,0,0,0.872389432677388,1.13362783106643,1.4555043671269,1.62700325833979,1.23350366406548,0.929119112685311,2.8769239232215,1.7931249457037,1.6553756092201,1.37898272294647,0,1.35426486594342,1.12945403725563,0.545812300115692,1.12361742222542,0.918251677112708,1.28371610830437,1.27867425159808,4.94776950280074,1.19678194572979,0.852449501065388,2.03146467040009,0.56738522469114,0.622822248995575,2.26123798731069,1.0429658368404,0.868755378820466,1.21079900526674,1.10483290796269,0.316462387440884,0.845021145247767,0,0.419317291016752,2.47122988522289,0.901061357049038,0.16072558669708,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23108503043699,1.63802985597466,0.891786973732369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.32501818449095,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.72571360654893,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0.383010740264733,0,0,0,0,0.156679895773023,0,0,0,0.605399121573143,1.27753871307098,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.26961417541674,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,2.2936464170227,0,0,0,0,1.5870805215462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41174371041569,0.23806443146374,0,0,0,0,0,0.435433495793923,0,0.134704106029175,4.80538776130932,1.99596213927608,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@LYZ | |||
}} |
Latest revision as of 05:44, 20 September 2015
Short description: | p10@LYZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_LYZ_5end |
Coexpression cluster: | C501_CD14_trachea_throat_Basophils_acute_Peripheral_Macrophage |
Association with transcript: | 499bp_to_AK130127_5end |
EntrezGene: | LYZ |
HGNC: | 6740 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.37e-70 | 48 |
phagocyte | 2.37e-70 | 48 |
classical monocyte | 1.44e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-62 | 42 |
monopoietic cell | 3.35e-55 | 59 |
monocyte | 3.35e-55 | 59 |
monoblast | 3.35e-55 | 59 |
promonocyte | 3.35e-55 | 59 |
macrophage dendritic cell progenitor | 3.02e-53 | 61 |
granulocyte monocyte progenitor cell | 4.34e-52 | 67 |
myeloid lineage restricted progenitor cell | 7.22e-49 | 66 |
myeloid leukocyte | 2.10e-44 | 72 |
myeloid cell | 5.84e-33 | 108 |
common myeloid progenitor | 5.84e-33 | 108 |
nongranular leukocyte | 2.84e-28 | 115 |
hematopoietic lineage restricted progenitor cell | 1.28e-24 | 120 |
leukocyte | 4.49e-23 | 136 |
hematopoietic stem cell | 6.29e-21 | 168 |
hematopoietic oligopotent progenitor cell | 2.77e-20 | 161 |
hematopoietic multipotent progenitor cell | 2.77e-20 | 161 |
hematopoietic cell | 1.44e-19 | 177 |
macrophage | 6.56e-09 | 6 |
mesenchymal cell | 7.62e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.38e-45 | 76 |
bone element | 1.15e-41 | 82 |
hematopoietic system | 4.76e-40 | 98 |
blood island | 4.76e-40 | 98 |
skeletal element | 1.64e-37 | 90 |
immune system | 3.90e-36 | 93 |
hemolymphoid system | 7.78e-36 | 108 |
skeletal system | 3.06e-33 | 100 |
lateral plate mesoderm | 6.97e-18 | 203 |
musculoskeletal system | 9.86e-18 | 167 |
open tracheal system trachea | 1.71e-12 | 2 |
mesoderm | 2.25e-09 | 315 |
mesoderm-derived structure | 2.25e-09 | 315 |
presumptive mesoderm | 2.25e-09 | 315 |
submandibular gland | 4.97e-07 | 1 |
submandibular gland primordium | 4.97e-07 | 1 |