FFCP PHASE1:Hg19::chr12:95510716..95510730,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55785 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21740 | |||
|TSSclassifier=strong | |||
|UniProt=F8VQX5 | |||
|association_with_transcript=18bp_to_ENST00000551521_5end | |||
|cluster_id=chr12:95510716..95510730,- | |||
|coexpression_cluster_id=C1694 | |||
|description=CAGE_peak_3_at_FGD6_5end | |||
|id=chr12:95510716..95510730,- | |||
|ontology_enrichment_celltype=CL:0000066!2.39e-37!254;CL:0002076!1.27e-26!43;CL:0002368!7.77e-20!13;CL:0000223!2.14e-17!59;CL:0002159!5.27e-14!13;CL:0002202!5.25e-12!9;CL:0002632!5.25e-12!9;CL:0000076!2.29e-10!62;CL:0002077!7.27e-09!33;CL:0000063!7.77e-09!578;CL:0002621!1.94e-08!3;CL:0002166!1.99e-08!3;CL:0000082!5.10e-08!19;CL:0002328!9.86e-08!3;CL:0000362!1.05e-07!8;CL:0002231!2.68e-07!3;CL:0002251!4.19e-07!21;CL:0000220!5.98e-07!246;CL:0002321!8.22e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002368;2.46e-26;13!CL:0002159;1.89e-20;14!CL:0002076;1.49e-19;42!CL:0002202;4.36e-17;9!CL:0002632;4.36e-17;9!CL:0002166;4.01e-15;3!CL:0002621;4.40e-15;3!CL:0002328;1.62e-13;3!CL:0000362;6.81e-13;9!CL:0000240;2.45e-12;6!CL:0000311;2.45e-12;6!CL:0000079;2.45e-12;6!CL:0000237;2.45e-12;6!CL:0000244;5.67e-11;4!CL:0000731;5.67e-11;4!CL:0002327;7.31e-11;4!CL:0000317;1.39e-10;2!CL:1000448;1.39e-10;2!CL:0002308;1.39e-10;2!CL:0002140;1.39e-10;2!CL:0000312;6.19e-09;5!CL:0002077;1.30e-08;34!CL:0000082;1.32e-07;19!CL:0000307;4.05e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.03e-26,13;CL:0000066,2.03e-26,253;CL:0002076,7.71e-24,42;CL:0002159,1.96e-20,14;CL:0002202,3.51e-17,9;CL:0002632,3.51e-17,9;CL:0000223,3.01e-16,58;CL:0002621,4.31e-15,3;CL:0002166,4.51e-15,3;CL:0002328,1.04e-13,3;CL:0000362,6.65e-13,9;CL:0000240,2.35e-12,6;CL:0000311,2.35e-12,6;CL:0000079,2.35e-12,6;CL:0000237,2.35e-12,6;CL:0000036,2.35e-12,6;CL:0000357,2.35e-12,6;CL:0000114,2.35e-12,6;CL:0000244,6.95e-11,4;CL:0000731,6.95e-11,4;CL:0002327,7.96e-11,4;CL:0000317,1.46e-10,2;CL:1000448,1.46e-10,2;CL:0002308,1.46e-10,2;CL:0002140,1.46e-10,2;CL:0002077,1.59e-09,34;CL:0000312,5.86e-09,5;CL:0000082,1.15e-07,19;CL:0000068,4.05e-07,3;CL:0000069,4.05e-07,3;CL:0000307,4.05e-07,3;CL:0000377,4.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;2.45e-12;6!CL:0000114;2.45e-12;6!CL:0000223;4.45e-09;58!CL:0000377;4.05e-07;3 | |||
|ontology_enrichment_disease=DOID:305!1.82e-14!106;DOID:1749!2.91e-14!14;DOID:0050687!3.61e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.60e-10;2!DOID:1749;1.09e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,4.42e-10,2;DOID:1749,1.04e-07,14;DOID:305,4.99e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0005153!4.94e-15!37;UBERON:0005911!1.41e-12!82;UBERON:0004119!2.30e-12!169;UBERON:0000925!2.30e-12!169;UBERON:0006595!2.30e-12!169;UBERON:0005157!3.91e-12!51;UBERON:0001004!1.73e-11!72;UBERON:0000065!3.49e-10!53;UBERON:0004807!2.68e-09!28;UBERON:0007196!3.73e-09!14;UBERON:0001558!3.73e-09!14;UBERON:0001949!1.94e-08!3;UBERON:0001007!2.05e-08!155;UBERON:0001555!2.05e-08!155;UBERON:0007026!2.05e-08!155;UBERON:0005178!4.06e-08!34;UBERON:0002224!4.06e-08!34;UBERON:0000344!4.08e-08!12;UBERON:0004802!5.10e-08!19;UBERON:0000115!5.10e-08!19;UBERON:0008947!5.10e-08!38;UBERON:0003258!5.10e-08!38;UBERON:0000365!6.13e-08!5;UBERON:0000161!8.26e-08!35;UBERON:0005181!8.43e-08!35;UBERON:0004815!9.86e-08!3;UBERON:0002031!9.86e-08!3;UBERON:0006554!1.32e-07!44;UBERON:0001008!2.33e-07!45;UBERON:0003729!3.23e-07!5;UBERON:0000072!4.28e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;4.67e-18;12!UBERON:0001949;4.40e-15;3!UBERON:0005911;6.07e-15;36!UBERON:0004807;7.47e-15;22!UBERON:0000365;1.09e-14;5!UBERON:0004815;1.62e-13;3!UBERON:0002031;1.62e-13;3!UBERON:0005910;2.92e-12;6!UBERON:0001708;1.86e-11;4!UBERON:0008895;1.86e-11;4!UBERON:0001911;7.31e-11;4!UBERON:0002419;1.39e-10;2!UBERON:0007771;1.39e-10;2!UBERON:0003297;1.39e-10;2!UBERON:0001821;1.39e-10;2!UBERON:0003487;1.39e-10;2!UBERON:0001820;1.39e-10;2!UBERON:0007196;5.07e-10;15!UBERON:0001558;5.07e-10;15!UBERON:0003350;1.66e-09;8!UBERON:0011159;3.01e-09;5!UBERON:0010371;2.05e-08;31!UBERON:0002185;2.64e-08;5!UBERON:0000344;1.17e-07;20!UBERON:0001003;1.31e-07;15!UBERON:0007376;1.31e-07;15!UBERON:0004802;1.32e-07;19!UBERON:0000115;1.32e-07;19!UBERON:0000065;8.22e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,4.31e-15,3;UBERON:0000365,1.70e-14,5;UBERON:0004815,1.04e-13,3;UBERON:0002031,1.04e-13,3;UBERON:0005153,3.09e-12,37;UBERON:0005910,4.23e-12,6;UBERON:0001708,2.03e-11,4;UBERON:0008895,2.03e-11,4;UBERON:0004807,2.12e-11,28;UBERON:0001911,7.96e-11,4;UBERON:0005333,7.96e-11,4;UBERON:0008425,7.96e-11,4;UBERON:0005311,7.96e-11,4;UBERON:0002419,1.46e-10,2;UBERON:0007771,1.46e-10,2;UBERON:0003297,1.46e-10,2;UBERON:0001821,1.46e-10,2;UBERON:0003487,1.46e-10,2;UBERON:0001820,1.46e-10,2;UBERON:0005089,1.46e-10,2;UBERON:0005088,1.46e-10,2;UBERON:0005911,2.48e-10,82;UBERON:0007196,4.48e-10,15;UBERON:0001558,4.48e-10,15;UBERON:0003350,1.90e-09,8;UBERON:0011159,3.22e-09,5;UBERON:0005157,3.51e-09,47;UBERON:0001004,6.63e-09,74;UBERON:0002185,2.04e-08,5;UBERON:0004119,2.14e-08,160;UBERON:0000925,2.14e-08,160;UBERON:0006595,2.14e-08,160;UBERON:0000065,8.09e-08,54;UBERON:0010188,9.57e-08,6;UBERON:0002539,9.57e-08,6;UBERON:0008816,9.57e-08,6;UBERON:0004802,1.15e-07,19;UBERON:0000115,1.15e-07,19;UBERON:0000344,1.22e-07,20;UBERON:0001003,1.29e-07,15;UBERON:0007376,1.29e-07,15;UBERON:0007383,1.29e-07,15;UBERON:0003102,3.69e-07,99;UBERON:0005178,4.56e-07,34;UBERON:0002224,4.56e-07,34;UBERON:0005181,7.85e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.436882744260345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,1.50602959389125,2.9580320813343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41130388857231,6.81865301477087,10.3249654340041,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,4.2802611309364,3.37205259772859,5.93120937228622,1.29623823221941,0,0,0,0,0,0,0,0,0,0,0,0,0,9.3733833986777,8.39910640994298,5.2456785979683,3.22410681730254,3.48760726216754,3.06706143332169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,9.62431057455767,0.552485933615378,0,0,0.131124414959424,0,0.924184045252977,0,0,0.73886140225013,0,0,0,0,0,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0,0,0,6.3169209179579,6.50060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,3.47098322258054,3.0750410778417,7.14631189969671,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.77332676353072,3.35151137767894,0,0,3.01353760869861,0,2.21715076768338,8.72948920786446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22886768554957,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6846023970404,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.3568316139384,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,1.70765727617876,0,0,0.587954384486266,1.39294730528644,0,0,0,0,0,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0.432164393964449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,2.87872795979168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0,0,0.578742114812744,0,0,0,0,0,0,0,0,0,0.245772908753719,3.59230609709666,0,0,0,0,0,0.139879507719444,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,0,0.550285795565037,0.693153996902029,0,0,0,0,0.20170506870352,0,0,0,0.739280431085226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.827356886187777,1.11231401892069,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3746412112643,0,0,0,0,0.487671699929078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,21.8794820463729,1.5245859670942,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407955318967927,2.93939145792117,1.92979289023174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,1.05824249194267,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p3@FGD6 | |||
}} |
Latest revision as of 02:09, 16 September 2015
Short description: | p3@FGD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGD6_5end |
Coexpression cluster: | C1694_squamous_Prostate_Sebocyte_Gingival_Mallassezderived_clear_Urothelial |
Association with transcript: | 18bp_to_ENST00000551521_5end |
EntrezGene: | FGD6 |
HGNC: | 21740 |
UniProt: | F8VQX5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.42e-10 | 2 |
squamous cell carcinoma | 1.04e-07 | 14 |
carcinoma | 4.99e-07 | 106 |