FFCP PHASE1:Hg19::chr14:38067629..38067650,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:38067629..38067650,- | |||
|description=CAGE_peak_at_chr14:38067629..38067650,- | |||
|id=chr14:38067629..38067650,- | |||
|ontology_enrichment_celltype=CL:0002368!6.59e-24!13;CL:0002202!4.92e-14!9;CL:0002632!4.92e-14!9;CL:0002076!3.58e-12!43;CL:0000066!4.48e-11!254;CL:1000507!3.23e-09!12;CL:1000494!3.23e-09!12;CL:0000223!5.19e-09!59;CL:0002328!5.32e-09!3;CL:1000449!7.05e-09!16;CL:0002681!1.11e-08!13;CL:0002584!1.11e-08!13;CL:0000082!3.23e-08!19;CL:1000497!9.67e-08!18;CL:0002518!9.67e-08!18;CL:0000244!9.09e-07!4;CL:0000731!9.09e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0002368;1.11e-29;13!CL:0000082;1.45e-11;19!CL:0002202;3.29e-11;9!CL:0002632;3.29e-11;9!CL:0002076;4.43e-11;42!CL:0002328;4.35e-09;3!CL:0002231;4.35e-09;3!CL:0000244;5.05e-07;4!CL:0000731;5.05e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,9.60e-30,13;CL:0002076,4.95e-13,42;CL:0000082,1.28e-11,19;CL:0002202,3.34e-11,9;CL:0002632,3.34e-11,9;CL:0000223,6.72e-11,58;CL:0000066,1.21e-10,253;CL:0002328,4.01e-09,3;CL:0002231,7.12e-09,3;CL:0000244,3.71e-07,4;CL:0000731,3.71e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0009847;1.70e-09;3!UBERON:0003353;1.70e-09;3!UBERON:0008425;1.97e-07;1!CL:0000223;4.18e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!1.23e-16!34;UBERON:0002224!1.23e-16!34;UBERON:0004119!4.59e-16!169;UBERON:0000925!4.59e-16!169;UBERON:0006595!4.59e-16!169;UBERON:0005181!4.87e-16!35;UBERON:0005153!2.95e-15!37;UBERON:0007196!4.23e-14!14;UBERON:0001558!4.23e-14!14;UBERON:0000065!6.66e-14!53;UBERON:0004921!7.55e-13!129;UBERON:0004185!7.55e-13!129;UBERON:0000915!2.24e-12!52;UBERON:0000464!2.76e-12!104;UBERON:0006554!2.16e-11!44;UBERON:0001008!4.73e-11!45;UBERON:0001007!6.25e-11!155;UBERON:0001555!6.25e-11!155;UBERON:0007026!6.25e-11!155;UBERON:0008947!7.80e-11!38;UBERON:0003258!7.80e-11!38;UBERON:0002048!1.09e-10!22;UBERON:0000117!1.09e-10!22;UBERON:0000171!1.09e-10!22;UBERON:0000170!1.09e-10!22;UBERON:0005597!1.09e-10!22;UBERON:0000118!1.09e-10!22;UBERON:0001004!4.73e-10!72;UBERON:0009569!5.53e-10!113;UBERON:0005157!6.21e-10!51;UBERON:0000466!7.72e-10!126;UBERON:0009773!3.23e-09!12;UBERON:0001231!3.23e-09!12;UBERON:0004810!3.23e-09!12;UBERON:0004815!5.32e-09!3;UBERON:0002031!5.32e-09!3;UBERON:0003064!5.42e-09!37;UBERON:0005177!6.28e-09!107;UBERON:0004211!7.05e-09!16;UBERON:0001285!7.05e-09!16;UBERON:0007684!7.05e-09!16;UBERON:0003220!7.05e-09!16;UBERON:0004208!7.05e-09!16;UBERON:0001225!1.11e-08!13;UBERON:0008987!1.11e-08!13;UBERON:0000353!2.06e-08!17;UBERON:0006555!2.82e-08!17;UBERON:0005103!2.82e-08!17;UBERON:0000083!2.82e-08!17;UBERON:0009201!2.82e-08!17;UBERON:0004819!2.82e-08!17;UBERON:0006553!2.82e-08!17;UBERON:0003074!2.82e-08!17;UBERON:0003060!2.82e-08!17;UBERON:0004802!3.23e-08!19;UBERON:0000115!3.23e-08!19;UBERON:0005911!3.45e-08!82;UBERON:0000077!5.06e-08!130;UBERON:0000080!9.67e-08!18;UBERON:0002120!9.67e-08!18;UBERON:0004875!9.67e-08!18;UBERON:0005721!9.67e-08!18;UBERON:0005754!9.67e-08!18;UBERON:0007297!9.67e-08!18;UBERON:0000072!4.18e-07!46;UBERON:0001851!7.35e-07!16;UBERON:0004876!7.81e-07!20;UBERON:0002185!7.92e-07!4;UBERON:0001041!9.85e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002048;2.93e-13;22!UBERON:0000117;2.93e-13;22!UBERON:0000171;2.93e-13;22!UBERON:0000170;2.93e-13;22!UBERON:0000065;7.36e-13;44!UBERON:0004802;1.45e-11;19!UBERON:0000115;1.45e-11;19!UBERON:0005178;5.40e-11;34!UBERON:0002224;5.40e-11;34!UBERON:0004807;6.53e-10;22!UBERON:0005911;7.58e-10;36!UBERON:0005181;1.22e-09;35!UBERON:0002367;2.79e-09;11!UBERON:0010147;2.79e-09;11!UBERON:0004815;4.35e-09;3!UBERON:0002031;4.35e-09;3!UBERON:0003937;1.62e-08;12!UBERON:0005399;1.62e-08;12!UBERON:0002171;1.97e-07;1!UBERON:0006518;1.97e-07;1!UBERON:0008949;1.97e-07;1!UBERON:0000101;1.97e-07;1!UBERON:0002167;1.97e-07;1!UBERON:0007196;9.05e-07;15!UBERON:0001558;9.05e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,4.74e-22,37;UBERON:0005157,7.10e-17,47;UBERON:0004119,4.47e-16,160;UBERON:0000925,4.47e-16,160;UBERON:0006595,4.47e-16,160;UBERON:0000065,1.46e-14,54;UBERON:0002048,2.69e-13,22;UBERON:0000117,2.69e-13,22;UBERON:0000171,2.69e-13,22;UBERON:0000170,2.69e-13,22;UBERON:0005597,2.69e-13,22;UBERON:0000118,2.69e-13,22;UBERON:0005911,4.03e-12,82;UBERON:0004921,9.46e-12,118;UBERON:0004802,1.28e-11,19;UBERON:0000115,1.28e-11,19;UBERON:0005178,9.85e-11,34;UBERON:0002224,9.85e-11,34;UBERON:0005181,2.15e-10,35;UBERON:0001004,5.16e-10,74;UBERON:0008947,1.76e-09,38;UBERON:0003258,1.76e-09,38;UBERON:0002367,3.36e-09,11;UBERON:0010147,3.36e-09,11;UBERON:0009846,3.36e-09,11;UBERON:0003353,3.36e-09,11;UBERON:0004902,3.36e-09,11;UBERON:0003820,3.36e-09,11;UBERON:0009847,3.36e-09,11;UBERON:0004815,4.01e-09,3;UBERON:0002031,4.01e-09,3;UBERON:0001007,6.03e-09,145;UBERON:0001555,6.03e-09,145;UBERON:0007026,6.03e-09,145;UBERON:0003937,1.92e-08,12;UBERON:0005399,1.92e-08,12;UBERON:0000915,2.36e-08,52;UBERON:0004807,1.05e-07,28;UBERON:0002171,2.31e-07,1;UBERON:0006518,2.31e-07,1;UBERON:0008949,2.31e-07,1;UBERON:0000101,2.31e-07,1;UBERON:0002167,2.31e-07,1;UBERON:0000162,2.99e-07,14;UBERON:0001353,2.99e-07,14;UBERON:0000163,2.99e-07,14;UBERON:0006866,2.99e-07,14;UBERON:0000164,2.99e-07,14;UBERON:0000931,2.99e-07,14;UBERON:0004122,8.99e-07,15;UBERON:0007196,9.13e-07,15;UBERON:0001558,9.13e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,2.79120467188971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,1.204823675113,1.84877005083394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232387885739037,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20303882181971,1.10497186723076,0,0,0,0.902399225814824,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98341898433174,2.30628080838127,2.55225424989168,2.2254711788221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,1.44333169088268,0.670302275535787,0,0.0941438007767792,1.72202149068492,1.68471475667626,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48681999993533,0.724999575434793,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.96209544862804,0.707660516026713,3.66618086960175,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.678923115418936,0,0,0,0,0,0,0,0,0,0,0,2.23073497220554,0,3.72757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.1993328406525,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,2.81926008926669,0.427149650270779,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12701969324168,0,0,0,0,0,0.245772908753719,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,6.26427356685031,1.55723962648897,0.549451649953598,0,0,0.913158720509496,0,0,0,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0.490751168076215,1.21917924982269,0,0,0,0,2.33939463462106,0,0,0,0,0,0,2.62271472604749,1.41095188908457,0.245148321753905,0,0,0,0,0,0,0,0,0,0,2.80844783412089,0.730336388246517,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0.213233981900981,0,0,0,0.224263725161227,0,0,0,0,0.5388164241167,0.573777643141411,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:38067629..38067650,- | |||
}} |
Latest revision as of 20:35, 24 July 2015
Short description: | p@chr14:38067629..38067650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:38067629..38067650, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 9.60e-30 | 13 |
endo-epithelial cell | 4.95e-13 | 42 |
epithelial cell of lung | 1.28e-11 | 19 |
epithelial cell of tracheobronchial tree | 3.34e-11 | 9 |
epithelial cell of lower respiratory tract | 3.34e-11 | 9 |
endodermal cell | 6.72e-11 | 58 |
epithelial cell | 1.21e-10 | 253 |
bronchial epithelial cell | 4.01e-09 | 3 |
epithelial cell of prostate | 7.12e-09 | 3 |
transitional epithelial cell | 3.71e-07 | 4 |
urothelial cell | 3.71e-07 | 4 |