FFCP PHASE1:Hg19::chr14:52327147..52327169,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54331 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4404 | |||
|TSSclassifier=strong | |||
|UniProt=P59768 | |||
|association_with_transcript=15bp_to_ENST00000335281_5end | |||
|cluster_id=chr14:52327147..52327169,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_5_at_GNG2_5end | |||
|id=chr14:52327147..52327169,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.91e-42!42;CL:0000766!2.35e-40!76;CL:0000860!3.82e-38!45;CL:0000557!1.03e-31!71;CL:0000839!7.53e-31!70;CL:0000763!2.71e-30!112;CL:0000049!2.71e-30!112;CL:0002009!5.53e-29!65;CL:0002194!6.92e-29!63;CL:0000576!6.92e-29!63;CL:0000040!6.92e-29!63;CL:0000559!6.92e-29!63;CL:0000738!3.71e-27!140;CL:0000037!4.92e-24!172;CL:0000566!4.92e-24!172;CL:0002032!7.11e-22!165;CL:0000837!7.11e-22!165;CL:0000988!5.10e-21!182;CL:0002087!1.04e-18!119;CL:0002031!1.27e-18!124;CL:0000094!7.35e-10!8;CL:0002393!2.67e-09!9;CL:0002397!2.67e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.42e-61;33!CL:0002057;4.42e-61;33!CL:0000576;6.73e-46;48!CL:0000473;4.90e-45;39!CL:0000234;4.90e-45;39!CL:0000766;1.76e-37;69!CL:0000094;3.71e-20;8!CL:0000763;8.24e-17;100!CL:0000081;3.47e-14;11!CL:0002087;1.30e-13;104!CL:0000738;1.11e-12;136!CL:0002393;1.24e-09;6!CL:0002397;1.24e-09;6!CL:0000775;5.08e-09;3!CL:0000767;5.93e-08;3!CL:0000226;2.46e-07;3!CL:0000875;2.46e-07;3!CL:0000842;2.46e-07;3!CL:0002396;2.46e-07;3!CL:0000988;3.05e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.36e-81,42;CL:0002057,2.36e-81,42;CL:0000766,1.13e-79,72;CL:0000473,1.42e-73,48;CL:0000234,1.42e-73,48;CL:0000557,9.68e-62,67;CL:0002009,6.19e-60,61;CL:0000839,7.75e-60,66;CL:0002194,3.43e-59,59;CL:0000576,3.43e-59,59;CL:0000040,3.43e-59,59;CL:0000559,3.43e-59,59;CL:0000763,1.24e-52,108;CL:0000049,1.24e-52,108;CL:0000738,1.32e-49,136;CL:0000037,1.36e-38,168;CL:0002032,3.68e-36,161;CL:0000837,3.68e-36,161;CL:0000988,8.35e-36,177;CL:0002087,8.65e-36,115;CL:0002031,3.07e-35,120;CL:0000094,3.92e-20,8;CL:0002393,3.01e-15,9;CL:0002397,3.01e-15,9;CL:0000081,3.61e-14,11;CL:0000134,1.09e-10,354;CL:0002320,3.43e-10,361;CL:0000219,4.34e-10,386;CL:0000034,4.52e-09,441;CL:0000775,5.10e-09,3;CL:0000723,1.88e-08,433;CL:0000048,2.79e-08,427;CL:0000767,6.24e-08,3;CL:0000226,1.73e-07,3;CL:0000842,1.73e-07,3;CL:0000875,2.33e-07,3;CL:0002396,2.33e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.42e-59;42!CL:0000049;1.10e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.99e-27!80;UBERON:0002193!9.58e-27!112;UBERON:0002390!1.34e-26!102;UBERON:0003061!1.34e-26!102;UBERON:0001474!2.01e-23!86;UBERON:0002405!4.25e-21!115;UBERON:0004765!8.88e-18!101;UBERON:0001434!8.88e-18!101;UBERON:0007023!7.96e-12!115;UBERON:0001950!2.24e-09!20;UBERON:0001049!3.72e-09!57;UBERON:0005068!3.72e-09!57;UBERON:0006241!3.72e-09!57;UBERON:0007135!3.72e-09!57;UBERON:0002619!5.47e-09!22;UBERON:0001017!6.09e-09!82;UBERON:0000073!1.00e-08!94;UBERON:0001016!1.00e-08!94;UBERON:0005743!1.78e-08!86;UBERON:0003080!3.30e-08!42;UBERON:0002780!1.03e-07!41;UBERON:0001890!1.03e-07!41;UBERON:0006240!1.03e-07!41;UBERON:0002204!1.39e-07!167;UBERON:0001893!1.93e-07!34;UBERON:0000956!2.52e-07!25;UBERON:0000203!2.52e-07!25;UBERON:0003081!4.51e-07!216;UBERON:0002791!4.80e-07!33;UBERON:0002616!4.98e-07!59;UBERON:0002020!8.60e-07!34;UBERON:0003528!8.60e-07!34 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.98e-53,76;UBERON:0002390,1.13e-48,98;UBERON:0003061,1.13e-48,98;UBERON:0001474,3.74e-48,82;UBERON:0002405,4.68e-45,93;UBERON:0002193,9.86e-45,108;UBERON:0004765,9.50e-43,90;UBERON:0001434,3.31e-37,100;UBERON:0002204,2.59e-19,167;UBERON:0003081,2.15e-17,203;UBERON:0002384,1.63e-09,371;UBERON:0000926,2.86e-08,315;UBERON:0004120,2.86e-08,315;UBERON:0006603,2.86e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0,0,0,0,0,0.0821005894499457,0,7.47392126012918,4.60595277716655,3.09632246632152,0,0,0,0,0,0.293600439334847,2.76997704265939,11.4310335057981,4.34021741431704,1.11957737119962,0.32389366601898,0.257575567634187,6.54292074508041,6.80176698639857,11.886618998203,8.13501629169896,4.93401465626191,8.05236564327269,6.04154023876516,7.42866048934392,7.56743135643473,8.61864201841546,7.74581620300591,12.1883837934908,8.094420600332,7.36846605156184,9.88783331558372,7.95818120164347,11.8743740018155,13.4260796417799,5.93732340336089,7.38015533200038,7.6720455095885,15.9615081245721,16.4541715160431,16.8162007228805,4.27122730936464,6.77927793946262,8.47036494349955,11.502590550034,18.0456041633907,15.1901945971625,2.11255286311942,0.850417199860174,1.46761051855863,0.673971786878971,0.901061357049038,4.17886525412408,1.42506371870624,2.38700012638908,3.28795476776341,0,0,1.77901850772711,0,0,0,0,0,0,1.76171156811282,2.29363936875137,1.32171328579026,2.24203425192614,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.534880391567015,0,0,0,0.255725123687061,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0,0.516833518338658,0.71153252537342,1.00416183829401,2.01414658554573,0,0.488124115096339,0,0,0,0,0,0,0,0.183201743930407,110.695550646293,112.456276603014,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0.116193942869518,0.725627385107593,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,1.47798971368783,0.528290604079356,1.65862492432618,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0.431255149719035,1.02674429023799,0.76228387266739,1.30139853857622,1.54657762555539,2.84777651068393,0,68.1596391791936,125.64781286569,92.4146594962359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86091223510599,3.8828556147351,2.24127871387233,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0.764637207142375,0,0,2.05681136543097,0,0,0,0,0,0,0.557409525377156,0.432807638929335,0,0,0.798317485731266,0.383010740264733,0.846694330895531,0.649243880549111,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.73254089635947,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.442317039724898,0.295547618953547,0.658156191461918,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,1.43042921082341,0,0,0,0,0,0.176915129006678,0,0,0,0,0.337005664903385,1.60515529459758,0.234264445725339,0,0,0,0,1.20990716048664,1.83643656978294,1.5796644907122,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,1.12990370390266,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0.273810757783986,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0.470284307407084,0,0,0,0,0,0,0.0846733320657845,0,0.136203406111576,0,0.275078873194468,0,3.14963448172101,0,0.91124334987037,0,0.236417121897595,0.681909645754975,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0.340776043570843,0.339936274560377,0,0,0,0.79339561045614,0,0,0,0.628817220398664,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0,0,1.34228891392159,0.500763722825999,0,0,0.496771223531068,1.798532254171,0,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0.327130788511688,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,1.1860729253635,0,0.327628914576042,0,0,0,0,0,0.157723490002507,0,0,0,0.192687675289379,1.41696576325585,0.319267718114302,0.41023272848151,1.26035848110859,0.0691572524642179,0.484426936895553,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,1.56302802246618,0,0,0,0.337687923091973,0,0.206686796501184,0.253663240775627,3.28184885410932,0,0,0,0,0,0.336283722218824,0,0.227662191351298,0.620916591138472,0.230467975111559,0,0.135939465953663,0.394636641377094,0,0,0.313972371402056,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0.485710993059139,0,0.596852325484105,0,0.22589216407792,0.219881033490858,0.452888530700021,0.154348316215889,0.437119121007915,0,0.245148321753905,0,0.588925401344836,0,2.113278637917,0,2.72553362141575,0.644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.203974470572744,3.49080552272302,0.5290268405154,0,0,0,0,0,0.506794004045748,0,0,0,0,0.378893491091197,0.267964130156178,0,0.310298987585686,0,0.714193294391221,0.129177819672012,0.31037357147929,0,0,0.202117188958219,0.217716747896961,1.02669990325584,0.134704106029175,0.573777643141411,0.665320713092027,0,0,0,0.0898252021065869,0,0.611207220914332,0,0,0.603821380773079,0 | |||
|short_description=p5@GNG2 | |||
}} |
Latest revision as of 05:36, 20 September 2015
Short description: | p5@GNG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GNG2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 15bp_to_ENST00000335281_5end |
EntrezGene: | GNG2 |
HGNC: | 4404 |
UniProt: | P59768 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.98e-53 | 76 |
hematopoietic system | 1.13e-48 | 98 |
blood island | 1.13e-48 | 98 |
bone element | 3.74e-48 | 82 |
immune system | 4.68e-45 | 93 |
hemolymphoid system | 9.86e-45 | 108 |
skeletal element | 9.50e-43 | 90 |
skeletal system | 3.31e-37 | 100 |
musculoskeletal system | 2.59e-19 | 167 |
lateral plate mesoderm | 2.15e-17 | 203 |
connective tissue | 1.63e-09 | 371 |
mesoderm | 2.86e-08 | 315 |
mesoderm-derived structure | 2.86e-08 | 315 |
presumptive mesoderm | 2.86e-08 | 315 |