FFCP PHASE1:Hg19::chr14:65346661..65346672,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6710 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11274 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-60bp_to_ENST00000556626,uc001xhs.2,uc001xhu.2_5end | |||
|cluster_id=chr14:65346661..65346672,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_6_at_SPTB_5end | |||
|id=chr14:65346661..65346672,- | |||
|ontology_enrichment_celltype=CL:0002274!3.79e-08!5;CL:0000457!3.79e-08!5;CL:0002191!3.79e-08!5;CL:0000097!3.79e-08!5;CL:0000831!3.79e-08!5;CL:0002028!3.79e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000764;3.29e-16;2!CL:0000558;3.29e-16;2!CL:0000097;1.04e-13;5!CL:0000163;7.85e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,3.30e-16,2;CL:0000765,3.30e-16,2;CL:0000050,3.30e-16,2;CL:0000038,3.30e-16,2;CL:0000558,3.30e-16,2;CL:0000547,3.30e-16,2;CL:0000549,3.30e-16,2;CL:0000550,3.30e-16,2;CL:0000552,3.30e-16,2;CL:0000097,9.81e-14,5;CL:0002028,9.81e-14,5;CL:0000763,9.65e-09,108;CL:0000049,9.65e-09,108;CL:0000163,7.59e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.29e-08;1 | |||
|ontology_enrichment_disease=DOID:1036!1.45e-10!8 | |||
|ontology_enrichment_disease_v019=DOID:1036;5.31e-22;8!DOID:8692;5.12e-10;31!DOID:1240;1.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,3.91e-22,8;DOID:8692,1.78e-10,31;DOID:1240,3.67e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.96e-28!115;UBERON:0000178!1.24e-15!15;UBERON:0000179!1.24e-15!15;UBERON:0000463!1.24e-15!15;UBERON:0001049!2.49e-12!57;UBERON:0005068!2.49e-12!57;UBERON:0006241!2.49e-12!57;UBERON:0007135!2.49e-12!57;UBERON:0003076!5.06e-10!15;UBERON:0003057!5.06e-10!15;UBERON:0002616!2.33e-09!59;UBERON:0002298!4.02e-09!8;UBERON:0000955!5.47e-08!69;UBERON:0006238!5.47e-08!69;UBERON:0004733!6.50e-08!12;UBERON:0002028!6.50e-08!12;UBERON:0007277!6.50e-08!12;UBERON:0001017!1.45e-07!82;UBERON:0002346!2.19e-07!90;UBERON:0004732!3.22e-07!13;UBERON:0003075!3.24e-07!86;UBERON:0007284!3.24e-07!86;UBERON:0000988!3.52e-07!3;UBERON:0005743!5.61e-07!86;UBERON:0001896!6.80e-07!3;UBERON:0005290!6.80e-07!3;UBERON:0010096!6.80e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;4.94e-15;2!UBERON:0002426;1.02e-08;1!UBERON:0003831;1.02e-08;1!UBERON:0003898;1.02e-08;1!UBERON:0004830;1.02e-08;1!UBERON:0003830;1.02e-08;1!UBERON:0005175;1.02e-08;1!UBERON:0001774;1.02e-08;1!UBERON:0001103;1.02e-08;1!UBERON:0000989;2.29e-08;1!UBERON:0008811;2.29e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,7.08e-15,2;UBERON:0002426,9.46e-09,1;UBERON:0003831,9.46e-09,1;UBERON:0003898,9.46e-09,1;UBERON:0004830,9.46e-09,1;UBERON:0003830,9.46e-09,1;UBERON:0005175,9.46e-09,1;UBERON:0001774,9.46e-09,1;UBERON:0001103,9.46e-09,1;UBERON:0010084,9.46e-09,1;UBERON:0000989,1.27e-08,1;UBERON:0008811,1.27e-08,1;UBERON:0006258,1.27e-08,1;UBERON:0005876,1.27e-08,1;UBERON:0004874,1.27e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.25779205848936,0.621984346622316,1.72943944100354,2.01987893482208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.6593765627276,40.2610594578347,0,0,0,0.103041011647722,0.183138929636687,0.247528499761764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01489521846434,1.52927441428475,0,1.66762242820452,0.822724546172388,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.89768643453339,0,1.08182271390393,0,0,0,0,0,0,1.13654458722565,0.23874448473769,0.890894042497916,0,0,0.281338832821026,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0.508507300585533,0,0,0.291604613383254,0.173624994933292,0,0.482385754501632,0,0.774054819518572,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,1.80476528493745,1.76456280885966,1.51039428278258,2.46679852541441,1.11255605286265,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0.208843899010911,0.067401132980677,2.40773294189637,0.234264445725339,0,0,0,0,0,0,0,0.300646838828985,0.518440956986236,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.335917362433631,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0,0.577000469484979,0,0,0,0,0.662091970365432,0,0,0,0,0,0.738832686744051,0,0,0,9.27548222385549,0.387848869084652,0.13223260174269,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0,0,0,0,0.123935764259002,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.276629009856872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0,0,0,0,0,0,0.266107110487916,0,0,1.97112225632812,0.197318320688547,0,0,0,0.785577949580009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.33846595652485,2.3196288626764,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,2.19156819110162,0,0,0,0,0,0,0,0,0.203974470572744,0.436350690340377,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0.0757786982182394,0,0,0,1.0661699095049,1.66645102024618,0,0.248298857183432,0,0.25458863311266,0,1.52401723527873,0,0,0.0717222053926763,0.99798106963804,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@SPTB | |||
}} |
Latest revision as of 02:23, 25 September 2015
Short description: | p6@SPTB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPTB_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -60bp_to_ENST00000556626, uc001xhs.2, uc001xhu.2_5end |
EntrezGene: | SPTB |
HGNC: | 11274 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 3.30e-16 | 2 |
erythroblast | 3.30e-16 | 2 |
megakaryocyte-erythroid progenitor cell | 3.30e-16 | 2 |
erythroid progenitor cell | 3.30e-16 | 2 |
reticulocyte | 3.30e-16 | 2 |
proerythroblast | 3.30e-16 | 2 |
basophilic erythroblast | 3.30e-16 | 2 |
polychromatophilic erythroblast | 3.30e-16 | 2 |
orthochromatic erythroblast | 3.30e-16 | 2 |
mast cell | 9.81e-14 | 5 |
basophil mast progenitor cell | 9.81e-14 | 5 |
myeloid cell | 9.65e-09 | 108 |
common myeloid progenitor | 9.65e-09 | 108 |
endocrine cell | 7.59e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
throat | 7.08e-15 | 2 |
chest muscle | 9.46e-09 | 1 |
respiratory system muscle | 9.46e-09 | 1 |
skeletal muscle of trunk | 9.46e-09 | 1 |
respiratory system skeletal muscle | 9.46e-09 | 1 |
thoracic segment muscle | 9.46e-09 | 1 |
chest organ | 9.46e-09 | 1 |
muscle of trunk | 9.46e-09 | 1 |
diaphragm | 9.46e-09 | 1 |
future diaphragm | 9.46e-09 | 1 |
penis | 1.27e-08 | 1 |
intromittent organ | 1.27e-08 | 1 |
lateral plate mesenchyme | 1.27e-08 | 1 |
undifferentiated genital tubercle | 1.27e-08 | 1 |
somatopleure | 1.27e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 3.91e-22 | 8 |
myeloid leukemia | 1.78e-10 | 31 |
leukemia | 3.67e-08 | 39 |