FFCP PHASE1:Hg19::chr14:65409452..65409479,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4554 | |||
|TSSclassifier=strong | |||
|UniProt=G3V323,G3V4J6 | |||
|association_with_transcript=0bp_to_ENST00000553522,ENST00000557323_5end | |||
|cluster_id=chr14:65409452..65409479,- | |||
|description=CAGE_peak_1_at_GPX2_5end | |||
|id=chr14:65409452..65409479,- | |||
|ontology_enrichment_celltype=CL:0000223!3.22e-24!59;CL:0000066!4.05e-23!254;CL:0002076!3.87e-19!43;CL:0002251!1.61e-11!21;CL:0002368!1.76e-08!13;CL:0002159!4.89e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.04e-15;42!CL:0002251;2.38e-10;20!CL:0002368;2.67e-09;13!CL:0002159;4.99e-08;14!CL:0000182;5.00e-08;12!CL:0000244;7.05e-07;4!CL:0000731;7.05e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,5.25e-26,58;CL:0000066,1.28e-23,253;CL:0002076,1.31e-18,42;CL:0002251,2.25e-10,20;CL:0002368,2.70e-09,13;CL:0000182,4.96e-08,12;CL:0002159,5.29e-08,14;CL:0000244,7.11e-07,4;CL:0000731,7.11e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;8.54e-14;58!UBERON:0006595;2.47e-10;86!UBERON:0009497;4.80e-09;13!UBERON:0004161;1.37e-08;11!UBERON:0001041;1.87e-08;30 | |||
|ontology_enrichment_disease=DOID:305!1.68e-18!106;DOID:0050687!2.04e-10!143;DOID:1749!4.08e-09!14;DOID:299!5.07e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:299;7.19e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.49e-15,106;DOID:0050687,3.76e-09,143;DOID:299,7.12e-08,25 | |||
|ontology_enrichment_uberon=UBERON:0004119!9.97e-34!169;UBERON:0000925!9.97e-34!169;UBERON:0006595!9.97e-34!169;UBERON:0001007!3.67e-30!155;UBERON:0001555!3.67e-30!155;UBERON:0007026!3.67e-30!155;UBERON:0004921!1.80e-27!129;UBERON:0004185!1.80e-27!129;UBERON:0000077!8.04e-22!130;UBERON:0005911!5.91e-21!82;UBERON:0000466!1.08e-16!126;UBERON:0001041!5.38e-16!98;UBERON:0003929!2.60e-13!54;UBERON:0001004!2.29e-12!72;UBERON:0000161!5.73e-12!35;UBERON:0005177!1.27e-11!107;UBERON:0000464!1.92e-11!104;UBERON:0002530!1.63e-10!59;UBERON:0007023!6.14e-10!115;UBERON:0000481!1.04e-09!347;UBERON:0003101!1.08e-09!22;UBERON:0000079!1.08e-09!22;UBERON:0005153!2.36e-09!37;UBERON:0001046!2.39e-09!19;UBERON:0005409!2.73e-09!35;UBERON:0000062!4.81e-09!511;UBERON:0002365!5.99e-09!31;UBERON:0002330!5.99e-09!31;UBERON:0009497!8.66e-09!25;UBERON:0000015!8.66e-09!25;UBERON:0002423!8.66e-09!25;UBERON:0006235!8.66e-09!25;UBERON:0004161!8.66e-09!25;UBERON:0003104!1.08e-08!238;UBERON:0009142!1.08e-08!238;UBERON:0000344!1.32e-08!12;UBERON:0000065!2.49e-08!53;UBERON:0009569!3.22e-08!113;UBERON:0001048!3.34e-08!168;UBERON:0005178!4.32e-08!34;UBERON:0002224!4.32e-08!34;UBERON:0003135!6.66e-08!11;UBERON:0000922!7.41e-08!612;UBERON:0005181!1.08e-07!35;UBERON:0000166!1.18e-07!21;UBERON:0005157!1.43e-07!51;UBERON:0009854!1.69e-07!23;UBERON:0000160!1.96e-07!27;UBERON:0000468!2.54e-07!659;UBERON:0000475!4.06e-07!365;UBERON:0009856!5.14e-07!26;UBERON:0005156!9.25e-07!59;UBERON:0000990!9.25e-07!59;UBERON:0008835!9.63e-07!22;UBERON:0003894!9.63e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.61e-14;33!UBERON:0005409;1.66e-11;22!UBERON:0001007;2.45e-11;81!UBERON:0002365;5.46e-11;31!UBERON:0002330;5.46e-11;31!UBERON:0001555;4.02e-10;54!UBERON:0002423;9.40e-10;25!UBERON:0000160;2.01e-09;17!UBERON:0005181;6.94e-08;35!UBERON:0003101;7.98e-08;22!UBERON:0000079;7.98e-08;22!UBERON:0005178;9.44e-08;34!UBERON:0002224;9.44e-08;34!UBERON:0005911;2.62e-07;36!UBERON:0002107;5.64e-07;19!UBERON:0006925;5.64e-07;19!UBERON:0003135;7.09e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.20e-35,160;UBERON:0000925,3.20e-35,160;UBERON:0006595,3.20e-35,160;UBERON:0001007,1.18e-30,145;UBERON:0001555,1.18e-30,145;UBERON:0007026,1.18e-30,145;UBERON:0004921,3.54e-29,118;UBERON:0005911,8.78e-19,82;UBERON:0001041,1.09e-17,87;UBERON:0001004,2.28e-13,74;UBERON:0003929,3.91e-12,54;UBERON:0002365,2.57e-11,31;UBERON:0002330,2.57e-11,31;UBERON:0005409,5.75e-11,25;UBERON:0005177,7.32e-11,101;UBERON:0000161,3.22e-10,36;UBERON:0011216,8.69e-10,223;UBERON:0009497,9.02e-10,25;UBERON:0000015,9.02e-10,25;UBERON:0002423,9.02e-10,25;UBERON:0006235,9.02e-10,25;UBERON:0004161,9.02e-10,25;UBERON:0002530,1.72e-09,59;UBERON:0000160,1.89e-09,17;UBERON:0009854,3.22e-09,23;UBERON:0000065,7.79e-09,54;UBERON:0005178,1.52e-08,34;UBERON:0002224,1.52e-08,34;UBERON:0005153,2.75e-08,37;UBERON:0008835,3.09e-08,22;UBERON:0003894,3.09e-08,22;UBERON:0005181,3.59e-08,35;UBERON:0001048,5.88e-08,160;UBERON:0003101,7.54e-08,22;UBERON:0000079,7.54e-08,22;UBERON:0009569,9.09e-08,112;UBERON:0009856,9.70e-08,26;UBERON:0000166,1.84e-07,22;UBERON:0001046,3.22e-07,19;UBERON:0005157,3.89e-07,47;UBERON:0002107,5.60e-07,19;UBERON:0006925,5.60e-07,19;UBERON:0008836,5.60e-07,19;UBERON:0003135,6.87e-07,11;UBERON:0007499,7.26e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,79.0702253051877,77.4099211260103,51.0260534030167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1434978119451,10.2002680721912,9.26961106961073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.9626777021199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,118.468902989101,44.1848715357152,165.773056134844,0.731842236777572,0.662648841607426,5.92589108634544,6.21966330092223,16.1485344560402,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,886.017693404598,1050.64229462838,1121.91003278799,0.441463099414651,47.3505488390987,0,34.6810901891257,35.9685610424383,54.3861740746923,1.85176890317059,0,0,0,0,0,0,0,0,1.58040879591855,1.71697232418975,0,0,0,262.454735162976,0.503946384596579,15.1699354049354,5.0152772713595,3.19697332365358,46.7726868581558,0,0,0,0,0.12624243342638,0,0,0,5.13217338068116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.4118187303453,300.559198984624,9.02393691571784,0,0,0.262248829918848,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0.831076008928724,0,0,0,0,0,0,21.3294894110785,0,0,1.14853107599234,1.30012049207304,0,0,0,0,0,0,0,0,0,30.5777093417809,18.4502464670502,8.55005173713714,19.8269250476878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.0897571923963,97.1938299526892,23.956016669491,20.2409171670075,136.039697764109,205.535200314503,164.956017115643,47.3230204426336,0,0,0,0,0,0,0,0,0,0.962479855263359,350.897589284837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,476.646956419736,0,0,0,0,0,0,0,0,0,0,0,0,2.59022384726391,125.985465482203,0,0,0,0,0.179736702294654,1574.49123127198,0,222.342236305648,0,0,0.969332746095218,0,0,1.04171104434093,0,0.724999575434793,663.529596952749,0.762760950878299,0,0,0,0,0,0.482385754501632,0,0,0,0.219385397153973,0,63.8560748796003,24.7779832382227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,73.6449502170832,0.216388639742091,230.900768010213,106.856737920034,187.586254494623,0,0,0,1.68502832451693,0,0.234264445725339,0,161.618975237906,0,7.89168805698781,20.5684217282729,0,0.063186579628488,0,0,0,0,0.313932918407225,0,16.2227441236982,0,0.173559738335131,267.029282954179,0.34823682632161,4.19344003780872,0,0,0,0,231.803749407322,0,2.93774963014692,0,0,0.0633107959558787,162.894301818091,0.240476460754601,628.405616512654,0.19980960958213,645.957340101857,0,0,0,0,4.00679858848552,0,0,0,0,0,0,0,0,0,0,0,0,6.58940701646671,0,0.223171457441873,0.201550417460179,0,101.351476088885,670.602447799088,647.623815159206,643.164615456632,8.76004585481264,0,0,0,0.964518890790115,0.137539436597234,0.415440338029185,0,0,0,412.249231059498,131.447919775063,5.92736845925479,0,0,0,0,0,0,0,0,0,0,0,0,0,744.778451552015,39.7520666736664,0.258565912723101,0.13223260174269,1033.70667449712,1128.40885072899,2.88326013932776,0.157204305099666,11.1844544943743,0,0,0,6.38341257770182,0,0,0,0,296.361079624192,0,0,0,0,0,0.18628920882415,0,7.87376570161272,0,0,0,0,69.5620937331961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,1.02496607435179,0,0,0,0,0,0,0,0,2.53574548030352,0,0,0,0,0,2.65771064666944,9.95323616052756,0,0,0,0,0,0,0,0,0,0,3163.05502647589,0,0,0.192687675289379,0,0,0,0,0,0,0,213.176844584228,1572.53641222538,13.7571448891259,0.346576998451015,0,0,0,3.1588337906688,0,24.2269343482259,0,0,1.77427303460454,0,0,0,0.0634158101939068,0,15.3512174720011,16.3749688868467,0,117.669195856067,0.535701835878287,0,0,0.227662191351298,0,0,0,0,0,0.827356886187777,1.89093383216518,81.0048718217305,0.157115589916002,27.7469441680651,24.6552854537564,0,0,0.0714765441766563,0,0,0,0,0,0.6828739083758,0,336.007567238637,0,0,3.81048345171836,0,0,0,3.91494011292273,846.055013763394,3202.66197135924,0.647428837187895,0,0,0.971421986118279,169.606111010027,6.76432635548652,0,491.654295115593,0,8.30295639616704,155.81462521994,15.517728795781,295.829579411398,24.0245355318827,70.7029641304878,0,0,0.8453114551668,0,0,1.61144719933943,0,248.547082539075,0.352894871715692,0.240724100067505,86.179693813089,34.4046962553406,0,0,0,0,33.3286909524702,0,0,0,0,0.98339014767326,0.253397002022874,24.0693638191077,367.423932240146,131.961075732037,8.77476387523313,0.909344378618873,0.267964130156178,0,0,43.9262002716021,0.952257725854961,1.55013383606415,4.40730471500591,0,0.25458863311266,0.404234377916439,189.631287418253,9.24029912930259,28.7593266372289,101.343476219852,2.66128285236811,0.407016343054873,0,0,11.8569266780695,0,0.855690109280065,1.62758471326295,61.9153799992527,0.402547587182052,0 | |||
|short_description=p1@GPX2 | |||
}} |
Latest revision as of 02:32, 25 September 2015
Short description: | p1@GPX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GPX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000553522, ENST00000557323_5end |
EntrezGene: | NA |
HGNC: | 4554 |
UniProt: | G3V323G3V4J6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 5.25e-26 | 58 |
epithelial cell | 1.28e-23 | 253 |
endo-epithelial cell | 1.31e-18 | 42 |
epithelial cell of alimentary canal | 2.25e-10 | 20 |
respiratory epithelial cell | 2.70e-09 | 13 |
hepatocyte | 4.96e-08 | 12 |
general ecto-epithelial cell | 5.29e-08 | 14 |
transitional epithelial cell | 7.11e-07 | 4 |
urothelial cell | 7.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.49e-15 | 106 |
cell type cancer | 3.76e-09 | 143 |
adenocarcinoma | 7.12e-08 | 25 |