FFCP PHASE1:Hg19::chr16:50313395..50313406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:50313395..50313406,+ | |||
|coexpression_cluster_id=C3567 | |||
|description=CAGE_peak_at_chr16:50313395..50313406,+ | |||
|id=chr16:50313395..50313406,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.26e-79!42;CL:0000839!2.14e-75!70;CL:0000766!9.50e-75!76;CL:0000557!3.71e-74!71;CL:0000860!5.48e-73!45;CL:0002194!8.68e-71!63;CL:0000576!8.68e-71!63;CL:0000040!8.68e-71!63;CL:0000559!8.68e-71!63;CL:0002009!2.99e-68!65;CL:0000763!2.06e-55!112;CL:0000049!2.06e-55!112;CL:0000738!3.40e-43!140;CL:0002031!2.11e-42!124;CL:0002087!8.05e-41!119;CL:0000037!9.95e-39!172;CL:0000566!9.95e-39!172;CL:0002032!1.27e-37!165;CL:0000837!1.27e-37!165;CL:0000988!9.13e-36!182;CL:0002393!1.66e-23!9;CL:0002397!1.66e-23!9;CL:0000134!1.52e-11!358;CL:0002320!4.79e-11!365;CL:0000875!2.00e-09!3;CL:0002396!2.00e-09!3;CL:0000219!2.69e-09!390;CL:0002274!3.30e-08!5;CL:0000457!3.30e-08!5;CL:0002191!3.30e-08!5;CL:0000097!3.30e-08!5;CL:0000831!3.30e-08!5;CL:0002028!3.30e-08!5;CL:0000048!9.80e-08!430;CL:0000723!1.95e-07!436;CL:0000034!4.74e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.33e-41;33!CL:0002057;1.33e-41;33!CL:0000576;2.12e-37;48!CL:0000473;5.39e-34;39!CL:0000234;5.39e-34;39!CL:0000875;4.02e-25;3!CL:0002396;4.02e-25;3!CL:0000766;6.22e-23;69!CL:0000763;7.69e-14;100!CL:0000840;1.03e-12;5!CL:0000738;3.18e-11;136!CL:0000990;1.21e-08;8!CL:0002087;2.98e-08;104!CL:0000451;3.73e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.83e-67,59;CL:0000576,4.83e-67,59;CL:0000040,4.83e-67,59;CL:0000559,4.83e-67,59;CL:0000860,1.58e-65,42;CL:0002057,1.58e-65,42;CL:0000839,4.29e-65,66;CL:0002009,9.06e-65,61;CL:0000557,4.37e-64,67;CL:0000473,3.20e-63,48;CL:0000234,3.20e-63,48;CL:0000766,1.85e-59,72;CL:0000763,1.17e-38,108;CL:0000049,1.17e-38,108;CL:0002031,1.81e-34,120;CL:0002087,5.50e-33,115;CL:0000738,5.09e-30,136;CL:0000875,3.03e-25,3;CL:0002396,3.03e-25,3;CL:0002032,8.03e-25,161;CL:0000837,8.03e-25,161;CL:0000037,1.22e-23,168;CL:0002393,1.69e-22,9;CL:0002397,1.69e-22,9;CL:0000988,2.95e-22,177;CL:0000840,7.20e-13,5;CL:0001029,7.20e-13,5;CL:0000134,3.14e-09,354;CL:0002320,5.66e-09,361;CL:0000990,9.55e-09,8;CL:0000219,4.54e-08,386;CL:0000451,3.08e-07,10;CL:0000048,5.84e-07,427;CL:0000723,8.31e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.43e-50;42!CL:0000049;7.29e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.39e-64!102;UBERON:0003061!1.39e-64!102;UBERON:0002371!2.18e-64!80;UBERON:0002193!8.73e-60!112;UBERON:0001474!5.31e-59!86;UBERON:0002405!8.78e-51!115;UBERON:0004765!2.58e-48!101;UBERON:0001434!2.58e-48!101;UBERON:0002204!1.27e-26!167;UBERON:0003081!2.55e-26!216;UBERON:0002384!5.47e-11!375;UBERON:0000926!2.65e-09!448;UBERON:0004120!2.65e-09!448;UBERON:0006603!2.65e-09!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.43e-56,76;UBERON:0001474,7.08e-52,82;UBERON:0004765,5.24e-47,90;UBERON:0002390,8.64e-47,98;UBERON:0003061,8.64e-47,98;UBERON:0002405,2.15e-45,93;UBERON:0002193,3.59e-42,108;UBERON:0001434,5.30e-42,100;UBERON:0002204,8.39e-24,167;UBERON:0003081,7.95e-21,203;UBERON:0000926,4.41e-12,315;UBERON:0004120,4.41e-12,315;UBERON:0006603,4.41e-12,315;UBERON:0002384,1.27e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.651032612147555,0.223915474239924,0,0,3.63495596948912,1.88937971844405,3.88134497900506,1.62700325833979,0.411167888021826,0,0.575384784644301,0.256160706529101,0.47296445977717,0,0,2.70852973188684,1.31769637679823,1.09162460023138,0.224723484445085,0.918251677112708,0.641858054152187,2.55734850319616,0,1.79517291859469,1.27867425159808,1.45104619314292,0,0.622822248995575,0.502497330513487,1.0429658368404,0.434377689410233,2.42159801053347,0.368277635987565,0.316462387440884,0.633765858935825,1.70083439972035,1.67726916406701,0.44931452458598,1.05123824989054,0.48217676009124,2.85012743741249,3.18266683518544,1.64397738388171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,1.91542711029194,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.297262324577456,0,0,0,0,0,0,0,0.528290604079356,0.207328115540772,0.144119953416961,1.00993946741104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0.635020748171649,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p@chr16:50313395..50313406,+ | |||
}} |
Latest revision as of 20:23, 16 September 2015
Short description: | p@chr16:50313395..50313406, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50313395..50313406, + |
Coexpression cluster: | C3567_CD14_Dendritic_CD14CD16_Monocytederived_Basophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.43e-56 | 76 |
bone element | 7.08e-52 | 82 |
skeletal element | 5.24e-47 | 90 |
hematopoietic system | 8.64e-47 | 98 |
blood island | 8.64e-47 | 98 |
immune system | 2.15e-45 | 93 |
hemolymphoid system | 3.59e-42 | 108 |
skeletal system | 5.30e-42 | 100 |
musculoskeletal system | 8.39e-24 | 167 |
lateral plate mesoderm | 7.95e-21 | 203 |
mesoderm | 4.41e-12 | 315 |
mesoderm-derived structure | 4.41e-12 | 315 |
presumptive mesoderm | 4.41e-12 | 315 |
connective tissue | 1.27e-08 | 371 |