FFCP PHASE1:Hg19::chr16:50594555..50594558,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:50594555..50594558,+ | |||
|coexpression_cluster_id=C101 | |||
|description=CAGE_peak_at_chr16:50594555..50594558,+ | |||
|id=chr16:50594555..50594558,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000623;1.78e-12;3!CL:0000791;7.10e-08;18!CL:0000789;7.10e-08;18!CL:0002419;7.10e-08;18!CL:0000182;3.92e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,1.78e-12,3;CL:0000825,1.78e-12,3;CL:0000791,5.49e-08,18;CL:0000789,5.49e-08,18;CL:0002420,5.49e-08,18;CL:0002419,5.49e-08,18;CL:0000790,5.49e-08,18;CL:0000182,4.84e-07,12;CL:0000624,8.64e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.53e-10;1!CL:0000790;7.10e-08;18!UBERON:0004161;9.67e-08;11!UBERON:0001041;3.39e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;2.16e-10;1!DOID:1357;2.16e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,2.16e-10,1;DOID:1357,2.16e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.18e-14!115;UBERON:0001049!1.31e-09!57;UBERON:0005068!1.31e-09!57;UBERON:0006241!1.31e-09!57;UBERON:0007135!1.31e-09!57;UBERON:0000073!5.65e-09!94;UBERON:0001016!5.65e-09!94;UBERON:0001017!2.07e-08!82;UBERON:0005743!2.20e-08!86;UBERON:0002780!2.79e-08!41;UBERON:0001890!2.79e-08!41;UBERON:0006240!2.79e-08!41;UBERON:0003080!5.66e-08!42;UBERON:0000200!1.40e-07!6;UBERON:0002346!2.72e-07!90;UBERON:0002020!3.24e-07!34;UBERON:0003528!3.24e-07!34;UBERON:0002616!3.45e-07!59;UBERON:0001893!4.09e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001764;2.16e-10;1!UBERON:0001825;2.16e-10;1!UBERON:0007029;5.53e-10;1!UBERON:0001000;5.53e-10;1!UBERON:0000941;5.53e-10;1!UBERON:0001785;5.53e-10;1!UBERON:0002464;5.53e-10;1!UBERON:0004904;5.53e-10;1!UBERON:0001021;5.53e-10;1!UBERON:0005352;5.53e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001764,2.16e-10,1;UBERON:0001825,2.16e-10,1;UBERON:0001000,3.40e-10,1;UBERON:0005352,3.40e-10,1;UBERON:0007029,4.44e-10,1;UBERON:0000941,5.30e-10,1;UBERON:0001785,5.30e-10,1;UBERON:0002464,5.30e-10,1;UBERON:0004904,5.30e-10,1;UBERON:0001021,5.30e-10,1;UBERON:0003902,5.30e-10,1;UBERON:0005425,5.30e-10,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53531759238885,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0,0,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0.983548850569165,1.96505381374582,1.43921049299656,0,0,0,0,0,0.294605907474837,0,0,0,0,0.328875809207352,0.276350017785848,0,0.296573126324121,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41124720257313,1.60464117470104,0.724122019413995,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.50939302401662,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0.245040215981032,0,0,0.0711418433484141,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,1.42068073403207,0,0,0,0,0,0,0,0.211125408127993,0.398495976502139,0.276283915531148,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349839999984783,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,1.29833183845255,0,0.176915129006678,0.611030144933625,0,0,0,0.269604531922708,0,0.468528891450678,0,0.19566461893209,0,1.57833761139756,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0.144090417154106,0.343609788497747,0,0,0,0,0,0,0.101998217636322,0,0,0.136905378891993,0,0,0,0,0.229160424011684,0,0,0,0,0,0,9.31967596219631,0.86661500537946,1.07140615895516,1.41547442093788,0,0,0,0.136203406111576,0.321506296930038,0.137539436597234,0,0,0,0.242998226632099,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517131825446202,0.13223260174269,0,0,0,0.157204305099666,0.828478110694391,0,0,0,0,0,0,0,0,5.4968933687582,0.886068179966986,0.122026264901963,0.1251909307065,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.0642292250964595,0,0,0,0.252071696221718,0,0,1.42769420259154,0,0.235939446695481,0,0,0,0,1.19349733269765,0,0,0,0,0,0.147856086217045,0.0675375846183947,0.781078098613847,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.214429632529969,0.158013611732727,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,1.45713297917742,0,18.1045205396845,0,7.68033357864928,0,0,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0,0.8453114551668,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730336388246517,0,0.573358332605805,1.10440093535229,0,0,0,0,0,0,0,0,0.380095503034311,0.101988829741982,0,0,0,0,0.267964130156178,1.65833887891756,0.310298987585686,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0.611207220914332,0.406896178315738,0,0,0 | |||
|short_description=p@chr16:50594555..50594558,+ | |||
}} |
Latest revision as of 09:31, 25 July 2015
Short description: | p@chr16:50594555..50594558, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:50594555..50594558, + |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 1.78e-12 | 3 |
pro-NK cell | 1.78e-12 | 3 |
mature alpha-beta T cell | 5.49e-08 | 18 |
alpha-beta T cell | 5.49e-08 | 18 |
immature T cell | 5.49e-08 | 18 |
mature T cell | 5.49e-08 | 18 |
immature alpha-beta T cell | 5.49e-08 | 18 |
hepatocyte | 4.84e-07 | 12 |
CD4-positive, alpha-beta T cell | 8.64e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
maxillary sinus | 2.16e-10 | 1 |
paranasal sinus | 2.16e-10 | 1 |
vas deferens | 3.40e-10 | 1 |
spermatic cord | 3.40e-10 | 1 |
surface | 4.44e-10 | 1 |
cranial nerve II | 5.30e-10 | 1 |
cranial nerve | 5.30e-10 | 1 |
nerve trunk | 5.30e-10 | 1 |
nerve connecting eye with brain | 5.30e-10 | 1 |
nerve | 5.30e-10 | 1 |
retinal neural layer | 5.30e-10 | 1 |
presumptive neural retina | 5.30e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 2.16e-10 | 1 |
maxillary sinus cancer | 2.16e-10 | 1 |