FFCP PHASE1:Hg19::chr16:53164956..53164988,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=80205 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25701 | |||
|TSSclassifier=strong | |||
|UniProt=Q3L8U1 | |||
|association_with_transcript=123bp_to_DQ333316_5end | |||
|cluster_id=chr16:53164956..53164988,+ | |||
|description=CAGE_peak_5_at_CHD9_5end | |||
|id=chr16:53164956..53164988,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.36e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.70e-19!115;UBERON:0002616!1.36e-10!59;UBERON:0001049!4.42e-10!57;UBERON:0005068!4.42e-10!57;UBERON:0006241!4.42e-10!57;UBERON:0007135!4.42e-10!57;UBERON:0001017!5.54e-09!82;UBERON:0000955!9.88e-09!69;UBERON:0006238!9.88e-09!69;UBERON:0000073!4.57e-08!94;UBERON:0001016!4.57e-08!94;UBERON:0000153!7.12e-08!129;UBERON:0007811!7.12e-08!129;UBERON:0005743!7.82e-08!86;UBERON:0000033!2.80e-07!123;UBERON:0003080!7.69e-07!42;UBERON:0004121!7.77e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.30e-19,114;UBERON:0001049,1.83e-09,56;UBERON:0005068,1.83e-09,56;UBERON:0006241,1.83e-09,56;UBERON:0007135,1.83e-09,56;UBERON:0001016,8.54e-09,89;UBERON:0001017,2.26e-08,81;UBERON:0000073,2.33e-08,53;UBERON:0002616,2.33e-08,53;UBERON:0000955,9.00e-08,68;UBERON:0006238,9.00e-08,68;UBERON:0010314,2.15e-07,132;UBERON:0003075,2.57e-07,82;UBERON:0007284,2.57e-07,82;UBERON:0000479,2.82e-07,773;UBERON:0002346,9.78e-07,86 | |||
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| |||
|short_description=p5@CHD9 | |||
}} |
Latest revision as of 22:28, 16 September 2015
Short description: | p5@CHD9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CHD9_5end |
Coexpression cluster: | NA |
Association with transcript: | 123bp_to_DQ333316_5end |
EntrezGene: | CHD9 |
HGNC: | 25701 |
UniProt: | Q3L8U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.30e-19 | 114 |
neural tube | 1.83e-09 | 56 |
neural rod | 1.83e-09 | 56 |
future spinal cord | 1.83e-09 | 56 |
neural keel | 1.83e-09 | 56 |
nervous system | 8.54e-09 | 89 |
central nervous system | 2.26e-08 | 81 |
regional part of nervous system | 2.33e-08 | 53 |
regional part of brain | 2.33e-08 | 53 |
brain | 9.00e-08 | 68 |
future brain | 9.00e-08 | 68 |
structure with developmental contribution from neural crest | 2.15e-07 | 132 |
neural plate | 2.57e-07 | 82 |
presumptive neural plate | 2.57e-07 | 82 |
tissue | 2.82e-07 | 773 |
neurectoderm | 9.78e-07 | 86 |