FFCP PHASE1:Hg19::chr17:38633210..38633225,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:38633210..38633225,- | |||
|coexpression_cluster_id=C918 | |||
|description=CAGE_peak_at_chr17:38633210..38633225,- | |||
|id=chr17:38633210..38633225,- | |||
|ontology_enrichment_celltype=CL:0000066!1.44e-32!254;CL:0002076!2.57e-24!43;CL:0000223!9.41e-22!59;CL:0002159!2.71e-14!13;CL:0002251!3.52e-14!21;CL:0002368!3.05e-13!13;CL:0000622!2.74e-09!5;CL:0002202!1.04e-07!9;CL:0002632!1.04e-07!9;CL:0000154!1.28e-07!6;CL:0000240!3.21e-07!6;CL:0000311!3.21e-07!6;CL:0000079!3.21e-07!6;CL:0000237!3.21e-07!6;CL:0000036!3.21e-07!6;CL:0000357!3.21e-07!6;CL:0000114!3.21e-07!6;CL:0000362!3.39e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002159;1.24e-19;14!CL:0000622;2.27e-15;5!CL:0002076;4.99e-15;42!CL:0000349;1.64e-13;19!CL:0000154;9.57e-13;6!CL:0002251;8.81e-11;20!CL:0002623;2.91e-10;3!CL:0002368;5.78e-10;13!CL:0002166;2.03e-09;3!CL:0002577;2.35e-09;3!CL:0002621;3.18e-09;3!CL:0002541;5.80e-09;3!CL:0000307;5.80e-09;3!CL:0000240;1.10e-08;6!CL:0000311;1.10e-08;6!CL:0000079;1.10e-08;6!CL:0000237;1.10e-08;6!CL:0002077;1.32e-08;34!CL:0000150;2.31e-08;9!CL:0000362;3.12e-08;9!CL:0002327;4.41e-08;4!CL:0000244;5.31e-08;4!CL:0000731;5.31e-08;4!CL:0002536;2.27e-07;2!CL:0000575;3.14e-07;2!CL:0000317;8.43e-07;2!CL:1000448;8.43e-07;2!CL:0002308;8.43e-07;2!CL:0002140;8.43e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.62e-31,253;CL:0002159,1.22e-19,14;CL:0002076,1.12e-18,42;CL:0000622,2.60e-15,5;CL:0000223,9.95e-14,58;CL:0000349,1.27e-13,19;CL:0000154,1.07e-12,6;CL:0002251,1.02e-10,20;CL:0002623,2.83e-10,3;CL:0002368,4.49e-10,13;CL:0002077,7.26e-10,34;CL:0002166,1.66e-09,3;CL:0002577,1.66e-09,3;CL:0002621,3.74e-09,3;CL:0000068,4.97e-09,3;CL:0000069,4.97e-09,3;CL:0000307,4.97e-09,3;CL:0000377,4.97e-09,3;CL:0002541,6.24e-09,3;CL:0000240,1.30e-08,6;CL:0000311,1.30e-08,6;CL:0000079,1.30e-08,6;CL:0000237,1.30e-08,6;CL:0000036,1.30e-08,6;CL:0000357,1.30e-08,6;CL:0000114,1.30e-08,6;CL:0000150,2.49e-08,9;CL:0000362,3.91e-08,9;CL:0002327,4.48e-08,4;CL:0000244,5.50e-08,4;CL:0000731,5.50e-08,4;CL:0002536,2.14e-07,2;CL:0000575,2.42e-07,2;CL:0000317,9.92e-07,2;CL:1000448,9.92e-07,2;CL:0002308,9.92e-07,2;CL:0002140,9.92e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000377;5.80e-09;3!CL:0000357;1.10e-08;6!CL:0000114;1.10e-08;6!CL:0000223;1.91e-08;58!UBERON:0008947;4.19e-08;29 | |||
|ontology_enrichment_disease=DOID:305!5.65e-19!106;DOID:1749!7.47e-11!14;DOID:0050687!1.06e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.32e-28!169;UBERON:0000925!5.32e-28!169;UBERON:0006595!5.32e-28!169;UBERON:0001004!1.43e-25!72;UBERON:0000077!3.16e-20!130;UBERON:0001007!2.97e-19!155;UBERON:0001555!2.97e-19!155;UBERON:0007026!2.97e-19!155;UBERON:0000065!2.31e-18!53;UBERON:0004921!5.28e-16!129;UBERON:0004185!5.28e-16!129;UBERON:0000161!8.89e-16!35;UBERON:0000072!1.43e-15!46;UBERON:0001737!7.73e-15!9;UBERON:0001041!1.23e-14!98;UBERON:0001557!1.82e-13!19;UBERON:0000166!2.36e-13!21;UBERON:0005631!4.68e-13!14;UBERON:0000158!4.68e-13!14;UBERON:0008947!5.64e-13!38;UBERON:0003258!5.64e-13!38;UBERON:0003124!2.91e-11!7;UBERON:0000165!1.22e-10!28;UBERON:0000930!1.22e-10!28;UBERON:0003102!4.25e-09!95;UBERON:0005911!4.45e-08!82;UBERON:0003729!4.91e-08!5;UBERON:0005153!6.22e-08!37;UBERON:0002530!9.42e-08!59;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4;UBERON:0000064!3.53e-07!219;UBERON:0001044!4.17e-07!6;UBERON:0003293!4.17e-07!6;UBERON:0003294!4.17e-07!6;UBERON:0010047!4.17e-07!6;UBERON:0000167!4.17e-07!6;UBERON:0002365!5.41e-07!31;UBERON:0002330!5.41e-07!31;UBERON:0000344!5.55e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.13e-25;9!UBERON:0001557;4.13e-25;9!UBERON:0005631;1.23e-13;10!UBERON:0000158;1.23e-13;10!UBERON:0000065;4.80e-13;44!UBERON:0001004;2.53e-10;65!UBERON:0000478;2.89e-10;24!UBERON:0000072;7.81e-10;37!UBERON:0001949;3.18e-09;3!UBERON:0003124;5.80e-09;3!UBERON:0000920;5.80e-09;3!UBERON:0000486;1.21e-08;12!UBERON:0001911;4.41e-08;4!UBERON:0000305;3.01e-07;7!UBERON:0001708;3.71e-07;4!UBERON:0008895;3.71e-07;4!UBERON:0001987;4.13e-07;4!UBERON:0000161;8.28e-07;19!UBERON:0000166;8.28e-07;19!UBERON:0002419;8.43e-07;2!UBERON:0007771;8.43e-07;2!UBERON:0003297;8.43e-07;2!UBERON:0001821;8.43e-07;2!UBERON:0003487;8.43e-07;2!UBERON:0001820;8.43e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.35e-25,9;UBERON:0005631,2.99e-19,14;UBERON:0000158,2.99e-19,14;UBERON:0001004,1.75e-16,74;UBERON:0003124,3.02e-14,7;UBERON:0004119,1.36e-13,160;UBERON:0000925,1.36e-13,160;UBERON:0006595,1.36e-13,160;UBERON:0000065,2.28e-11,54;UBERON:0001557,5.37e-11,19;UBERON:0000478,2.38e-10,24;UBERON:0008947,6.27e-10,38;UBERON:0003258,6.27e-10,38;UBERON:0001949,3.74e-09,3;UBERON:0003102,5.04e-09,99;UBERON:0000920,6.24e-09,3;UBERON:0001911,4.48e-08,4;UBERON:0005333,4.48e-08,4;UBERON:0008425,4.48e-08,4;UBERON:0005311,4.48e-08,4;UBERON:0000072,1.73e-07,47;UBERON:0004923,1.84e-07,66;UBERON:0000305,2.62e-07,7;UBERON:0001987,3.19e-07,4;UBERON:0001708,3.19e-07,4;UBERON:0008895,3.19e-07,4;UBERON:0004340,3.19e-07,4;UBERON:0002419,9.92e-07,2;UBERON:0007771,9.92e-07,2;UBERON:0003297,9.92e-07,2;UBERON:0001821,9.92e-07,2;UBERON:0003487,9.92e-07,2;UBERON:0001820,9.92e-07,2;UBERON:0005089,9.92e-07,2;UBERON:0005088,9.92e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,6.99012390816551,4.48403862988371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919421224478927,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.74308691902101,2.96627554227544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.23312862571041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35282597214308,2.18196896472668,2.58124135850103,0.121973706129595,0,0,0,0,0,0,0,0,0,0,3.07597680103594,4.21461725195254,1.44606617930089,3.639701100169,2.61455332910887,1.89816495288877,2.42696354688296,2.35465758150415,3.07797725557112,0,0,0,0,0,0,0,0,0,0,11.6335302533143,1.1240175325762,8.44443368257699,11.6661440899747,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,4.03157107677263,2.55195175036296,12.6277517011016,10.4628217865026,6.13412286664338,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,3.32870879020994,2.72151263996712,0,0,0,0,0,0,0,0,0,0,0,0,0,8.82228469334453,9.02393691571784,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,4.55042172225565,0,0,0,0,0,0,0,0.0852266274161009,0,5.12383237619032,8.07198282933446,1.78657797492418,1.8208400553999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92444225451024,2.68120910214315,1.08890984861323,0.188287601553558,8.17960208075337,0,6.20802214951346,10.1078296091062,0,0,0,0.238231775457789,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,3.58116727106535,0,2.76444631889309,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0.123084805461069,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0.508507300585533,1.41832609060762,0,0,0,0,0,0,0,0,0,0.32681539055697,2.09135616417905,0,0.113942055847001,0,0,0,1.5950057986596,1.09917112082235,2.66517388009317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17398771359254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07791637155815,0,0.17472666824203,0,1.35458863804719,0.65780385377567,1.31384731285135,0.484945082442097,0,0.225980740780532,0,0,0,0.391102765469606,0,0,0.599428828746391,0,0,0,1.87271237384595,0,2.82832841540154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236349546921671,0.247247575143499,0.202210631562555,0,0,0,0,0,0,0,0,0,0,2.34804281319486,0,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0.492555124496034,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,2.62458856720424,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23520578864389,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,1.05656061679314,0,0,0,0,0,1.67855409263333,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490738592505128,0.235939446695481,2.01771458373847,0.924205329202706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0.496211178389294,0,0.127762427639595,0,0,0,0,0.620916591138472,0,0,0,0,0.472775363535873,1.33477682270483,0.235479278551542,0,0.280272163313789,0,0,0,0,0,0,0,0,7.04534958154325,4.4386804044427,5.53007729451273,0.430227358820278,0,0,0,0.22910686854405,0,0,0,0.392600934460972,0,0,0,0,0.485710993059139,0,0.397901550322736,0,0.11294608203896,0,0,0,0,0,0.490296643507811,0,0,0,0,0,0,0,0,1.2498775702396,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0.112131862580613,0.12729431655633,0,0.217716747896961,0.342233301085281,0.202056159043763,0.286888821570705,0,0.407016343054873,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p@chr17:38633210..38633225,- | |||
}} |
Latest revision as of 16:30, 25 July 2015
Short description: | p@chr17:38633210..38633225, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38633210..38633225, - |
Coexpression cluster: | C918_Keratinocyte_Mammary_Prostate_Urothelial_salivary_Corneal_Sebocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 3.35e-25 | 9 |
extraembryonic membrane | 2.99e-19 | 14 |
membranous layer | 2.99e-19 | 14 |
respiratory system | 1.75e-16 | 74 |
chorion | 3.02e-14 | 7 |
endoderm-derived structure | 1.36e-13 | 160 |
endoderm | 1.36e-13 | 160 |
presumptive endoderm | 1.36e-13 | 160 |
respiratory tract | 2.28e-11 | 54 |
upper respiratory tract | 5.37e-11 | 19 |
extraembryonic structure | 2.38e-10 | 24 |
respiratory primordium | 6.27e-10 | 38 |
endoderm of foregut | 6.27e-10 | 38 |
gingival epithelium | 3.74e-09 | 3 |
surface structure | 5.04e-09 | 99 |
egg chorion | 6.24e-09 | 3 |
mammary gland | 4.48e-08 | 4 |
mammary bud | 4.48e-08 | 4 |
mammary ridge | 4.48e-08 | 4 |
mammary placode | 4.48e-08 | 4 |
segment of respiratory tract | 1.73e-07 | 47 |
organ component layer | 1.84e-07 | 66 |
amnion | 2.62e-07 | 7 |
placenta | 3.19e-07 | 4 |
jaw skeleton | 3.19e-07 | 4 |
splanchnocranium | 3.19e-07 | 4 |
allantois | 3.19e-07 | 4 |
skin gland | 9.92e-07 | 2 |
epidermis gland | 9.92e-07 | 2 |
gland of integumental system | 9.92e-07 | 2 |
sebaceous gland | 9.92e-07 | 2 |
skin sebaceous gland | 9.92e-07 | 2 |
sweat gland | 9.92e-07 | 2 |
sweat gland placode | 9.92e-07 | 2 |
sebaceous gland placode | 9.92e-07 | 2 |