FFCP PHASE1:Hg19::chr17:39254391..39254395,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=728224 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17230 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BYQ9 | |||
|association_with_transcript=0bp_to_ENST00000333822_5end | |||
|cluster_id=chr17:39254391..39254395,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP4-8_5end | |||
|id=chr17:39254391..39254395,- | |||
|ontology_enrichment_celltype=CL:0000055!4.01e-08!180;CL:0002620!4.29e-08!23;CL:0000057!1.71e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002556;5.68e-12;6!CL:0002262;1.64e-09;2!CL:1000398;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002556,6.00e-12,6;CL:0002262,1.57e-09,2;CL:1000398,1.57e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.08e-18;1!UBERON:0008814;8.69e-10;2!UBERON:0010056;8.69e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;1.12e-17;1!DOID:0060084;9.37e-07;3!DOID:127;9.37e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,7.37e-18,1;DOID:0060084,8.62e-07,3;DOID:127,8.62e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.16e-07!95;UBERON:0001444!7.90e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.66e-18;1!UBERON:0002426;4.08e-18;1!UBERON:0003831;4.08e-18;1!UBERON:0003898;4.08e-18;1!UBERON:0004830;4.08e-18;1!UBERON:0003830;4.08e-18;1!UBERON:0005175;4.08e-18;1!UBERON:0001774;4.08e-18;1!UBERON:0001103;4.08e-18;1!UBERON:0001758;5.68e-12;6!UBERON:0003672;5.68e-12;6!UBERON:0003129;2.13e-10;7!UBERON:0005090;9.87e-10;2!UBERON:0001630;9.87e-10;2!UBERON:0001281;1.64e-09;2!UBERON:0003497;1.64e-09;2!UBERON:0003909;1.64e-09;2!UBERON:0003835;1.64e-09;2!UBERON:0001723;6.14e-07;3!UBERON:0001033;6.14e-07;3!UBERON:0011137;6.16e-07;11!UBERON:0010323;6.16e-07;11!UBERON:0001280;9.37e-07;3!UBERON:0004647;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.66e-18,1;UBERON:0002426,4.44e-18,1;UBERON:0003831,4.44e-18,1;UBERON:0003898,4.44e-18,1;UBERON:0004830,4.44e-18,1;UBERON:0003830,4.44e-18,1;UBERON:0005175,4.44e-18,1;UBERON:0001774,4.44e-18,1;UBERON:0001103,4.44e-18,1;UBERON:0010084,4.44e-18,1;UBERON:0001758,6.00e-12,6;UBERON:0003672,6.00e-12,6;UBERON:0003129,2.24e-10,7;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0001281,1.57e-09,2;UBERON:0003497,1.57e-09,2;UBERON:0003909,1.57e-09,2;UBERON:0003835,1.57e-09,2;UBERON:0001723,6.14e-07,3;UBERON:0001033,6.14e-07,3;UBERON:0010056,6.14e-07,3;UBERON:0010323,6.35e-07,11;UBERON:0001280,9.12e-07,3;UBERON:0004647,9.12e-07,3;UBERON:0005171,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0.23486899728753,0,0.421352420106746,0.204154171254893,0.245668634623536,0.103325781175765,0,0,0,0,0,0.125118519871964,3.87889761677856,0,1.22595118319608,0,0,0.358779271377724,0,0.423863802319124,0,0,0,0,0.168776332241266,0.0974370051611986,0,0.184099797284599,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.8800594298514,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0.464845549297286,0.62962469366128,1.3940745403212,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01288823649394,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0.391969589657511,0.69647365264322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.60332353139754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633602019116439,0,0,0,0,0,0.542999601753713,1.72844298240254,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895444205407437,0,0,0.176689145945881,0,0,0,0,0.607719912354764,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366857197043358,6.23838597211826,0,0.690359926060101,0,0,0,0,0,1.80149109261106,0.147856086217045,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.340853619036631,0,0,0,0,0,0,0,0,0,0,17.9713067431882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.897054900644907,0,0,0,0,0.0673520530145875,0,0,0,0.106727345877715,0,0,4.69281884806909,0,0,0,0,0 | |||
|short_description=p1@KRTAP4-8 | |||
}} |
Latest revision as of 04:32, 20 September 2015
Short description: | p1@KRTAP4-8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP4-8_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | 0bp_to_ENST00000333822_5end |
EntrezGene: | KRTAP4-8 |
HGNC: | 17230 |
UniProt: | Q9BYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of periodontium | 6.00e-12 | 6 |
endothelial cell of sinusoid | 1.57e-09 | 2 |
endothelial cell of hepatic sinusoid | 1.57e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
surface | 2.66e-18 | 1 |
chest muscle | 4.44e-18 | 1 |
respiratory system muscle | 4.44e-18 | 1 |
skeletal muscle of trunk | 4.44e-18 | 1 |
respiratory system skeletal muscle | 4.44e-18 | 1 |
thoracic segment muscle | 4.44e-18 | 1 |
chest organ | 4.44e-18 | 1 |
muscle of trunk | 4.44e-18 | 1 |
diaphragm | 4.44e-18 | 1 |
future diaphragm | 4.44e-18 | 1 |
periodontium | 6.00e-12 | 6 |
dentition | 6.00e-12 | 6 |
skull | 2.24e-10 | 7 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
hepatic sinusoid | 1.57e-09 | 2 |
abdomen blood vessel | 1.57e-09 | 2 |
sinusoid | 1.57e-09 | 2 |
abdominal segment blood vessel | 1.57e-09 | 2 |
tongue | 6.14e-07 | 3 |
gustatory system | 6.14e-07 | 3 |
future tongue | 6.14e-07 | 3 |
cranial skeletal system | 6.35e-07 | 11 |
liver parenchyma | 9.12e-07 | 3 |
liver lobule | 9.12e-07 | 3 |
hepatic duct | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 7.37e-18 | 1 |
cell type benign neoplasm | 8.62e-07 | 3 |
leiomyoma | 8.62e-07 | 3 |