FFCP PHASE1:Hg19::chr17:70910145..70910148,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:70910145..70910148,- | |||
|description=CAGE_peak_at_chr17:70910145..70910148,- | |||
|id=chr17:70910145..70910148,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;1.06e-13;4!DOID:1325;2.11e-08;7!DOID:3904;2.11e-08;7!DOID:3905;8.14e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-10!115;UBERON:0002020!1.01e-09!34;UBERON:0003528!1.01e-09!34;UBERON:0002791!7.56e-09!33;UBERON:0001049!1.04e-08!57;UBERON:0005068!1.04e-08!57;UBERON:0006241!1.04e-08!57;UBERON:0007135!1.04e-08!57;UBERON:0001893!1.85e-08!34;UBERON:0000955!7.12e-08!69;UBERON:0006238!7.12e-08!69;UBERON:0002308!1.31e-07!9;UBERON:0000125!1.31e-07!9;UBERON:0003075!2.04e-07!86;UBERON:0007284!2.04e-07!86;UBERON:0002346!2.45e-07!90;UBERON:0000073!2.74e-07!94;UBERON:0001016!2.74e-07!94;UBERON:0002616!2.95e-07!59;UBERON:0002780!3.00e-07!41;UBERON:0001890!3.00e-07!41;UBERON:0006240!3.00e-07!41;UBERON:0001017!4.89e-07!82;UBERON:0003080!5.72e-07!42;UBERON:0005743!6.37e-07!86;UBERON:0001869!9.27e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002038;3.10e-50;1!UBERON:0009661;3.10e-50;1!UBERON:0002950;3.10e-50;1!UBERON:0001891;3.10e-50;1!UBERON:0001896;8.69e-18;3!UBERON:0005290;8.69e-18;3!UBERON:0002298;1.38e-09;6!UBERON:0009663;2.11e-08;7!UBERON:0002420;8.14e-07;9!UBERON:0000125;8.14e-07;9!UBERON:0007245;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0010009;8.14e-07;9!UBERON:0010011;8.14e-07;9!UBERON:0000454;8.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,6.58e-50,1;UBERON:0009661,6.58e-50,1;UBERON:0002950,6.58e-50,1;UBERON:0001891,6.58e-50,1;UBERON:0009616,6.58e-50,1;UBERON:0010286,6.58e-50,1;UBERON:0001896,8.00e-18,3;UBERON:0005290,8.00e-18,3;UBERON:0010096,8.00e-18,3;UBERON:0002298,1.32e-09,6;UBERON:0009663,2.35e-08,7;UBERON:0002420,8.85e-07,9;UBERON:0000125,8.85e-07,9;UBERON:0007245,8.85e-07,9;UBERON:0002308,8.85e-07,9;UBERON:0010009,8.85e-07,9;UBERON:0010011,8.85e-07,9;UBERON:0000454,8.85e-07,9 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0.142169232487422,0.293600439334847,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0,0.196709770113833,0.786021525498329,0,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0,0.144119953416961,0.50496973370552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.557409525377156,0,0.0711418433484141,0.318852545457645,0.199579371432817,0,0,0.324621940274555,0,0.684704037099577,0,0,0.169291777801603,0.1605880751037,0,0.425846237690326,0,0.307240764308458,0,0.333698283423817,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0.222886768554957,0,0,0,0,0,0.140669416410513,0.111308705022906,0,1.05562704063997,0,0.276283915531148,0.251932747854276,0,0,0,0.179736702294654,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.227586896570999,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0,0,0.37950746544837,0,0,0,0,0,0,0.0884575645033392,0,0,0,0.313265848516366,0.337005664903385,0,0,0.364909578431332,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0.410716136675979,0,0,0,0.279282401272254,0,0.717873024576814,0,0.429226048136571,0,0,0,0,0,0,0,0.0984274815147488,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.258565912723101,0.52893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0.122026264901963,0.3755727921195,1.14681839138014,0.221858103073705,0.124192805882767,0.138348634936231,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0,0,0.426766918776564,0,0,0,0,0,0.127894371303652,0.107824811396682,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0.80682027481408,0,0.261906694481422,0,0,0,0,0.413373593002368,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0.280272163313789,0,0,0,0.0714765441766563,0.790068058663633,0,0,0,0,0,0,0,0.236664001461131,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0.198950775161368,0.237840181555137,0,1.75904826792687,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0.499705779624645,0.178553938605658,0,0,0,0.458729283404541,1.00337708206016,0.157771562193185,0.0679914901909147,0,0,0,0,0,0,0,0,0,0.534434810531121,0,0,0.0757786982182394,0,0,0.310298987585686,0.213233981900981,0,0,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.0898252021065869,0,0,0,0,0,0 | |||
|short_description=p@chr17:70910145..70910148,- | |||
}} |
Latest revision as of 20:35, 25 July 2015
Short description: | p@chr17:70910145..70910148, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:70910145..70910148, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
substantia nigra | 6.58e-50 | 1 |
midbrain nucleus | 6.58e-50 | 1 |
regional part of midbrain | 6.58e-50 | 1 |
midbrain | 6.58e-50 | 1 |
presumptive midbrain | 6.58e-50 | 1 |
midbrain neural tube | 6.58e-50 | 1 |
medulla oblongata | 8.00e-18 | 3 |
myelencephalon | 8.00e-18 | 3 |
future myelencephalon | 8.00e-18 | 3 |
brainstem | 1.32e-09 | 6 |
telencephalic nucleus | 2.35e-08 | 7 |
basal ganglion | 8.85e-07 | 9 |
neural nucleus | 8.85e-07 | 9 |
nuclear complex of neuraxis | 8.85e-07 | 9 |
nucleus of brain | 8.85e-07 | 9 |
aggregate regional part of brain | 8.85e-07 | 9 |
collection of basal ganglia | 8.85e-07 | 9 |
cerebral subcortex | 8.85e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |