FFCP PHASE1:Hg19::chr17:76128488..76128519,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11322 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18021 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z403 | |||
|association_with_transcript=0bp_to_ENST00000322914,NM_007267,uc002jul.1_5end | |||
|cluster_id=chr17:76128488..76128519,- | |||
|coexpression_cluster_id=C272 | |||
|description=CAGE_peak_4_at_TMC6_5end | |||
|id=chr17:76128488..76128519,- | |||
|ontology_enrichment_celltype=CL:0000037!1.87e-31!172;CL:0000566!1.87e-31!172;CL:0000542!2.44e-29!53;CL:0000051!2.44e-29!53;CL:0000838!1.17e-28!52;CL:0002032!1.23e-28!165;CL:0000837!1.23e-28!165;CL:0000988!1.66e-28!182;CL:0000738!1.78e-27!140;CL:0002087!1.07e-23!119;CL:0002031!4.71e-21!124;CL:0000791!4.29e-15!18;CL:0000789!4.29e-15!18;CL:0002420!4.29e-15!18;CL:0002419!4.29e-15!18;CL:0000790!4.29e-15!18;CL:0000084!4.22e-14!25;CL:0000827!4.22e-14!25;CL:0000945!1.02e-13!24;CL:0000826!1.02e-13!24;CL:0000236!2.18e-10!14;CL:0000625!3.27e-10!11;CL:0000763!3.44e-07!112;CL:0000049!3.44e-07!112;CL:0002076!6.35e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.20e-26;53!CL:0000791;4.66e-23;18!CL:0000789;4.66e-23;18!CL:0002419;4.66e-23;18!CL:0000084;9.44e-23;25!CL:0000945;1.51e-20;24!CL:0000625;2.66e-15;11!CL:0000236;3.33e-15;13!CL:0000624;1.80e-08;6!CL:0002087;4.24e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.69e-46,53;CL:0000051,1.69e-46,53;CL:0000838,2.06e-45,52;CL:0000037,1.06e-24,168;CL:0000738,9.76e-24,136;CL:0000791,5.17e-23,18;CL:0000789,5.17e-23,18;CL:0002420,5.17e-23,18;CL:0002419,5.17e-23,18;CL:0000790,5.17e-23,18;CL:0000988,6.25e-23,177;CL:0000084,1.13e-22,25;CL:0000827,1.13e-22,25;CL:0002032,4.09e-21,161;CL:0000837,4.09e-21,161;CL:0000945,2.19e-20,24;CL:0000826,2.19e-20,24;CL:0002087,5.90e-19,115;CL:0000236,5.33e-16,14;CL:0002031,2.24e-15,120;CL:0000625,2.89e-15,11;CL:0000624,1.99e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000051;1.20e-26;53!CL:0000790;4.66e-23;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000974!7.88e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.61e-09;15!UBERON:0000179;1.61e-09;15!UBERON:0000463;1.61e-09;15!UBERON:0002390;8.90e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.61e-09,15;UBERON:0000179,1.61e-09,15;UBERON:0000463,1.61e-09,15;UBERON:0000974,3.53e-07,10;UBERON:0004177,8.36e-07,7;UBERON:0005057,8.36e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,9.07141518364156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44522898393444,1.31360943119913,1.25937250101887,4.72037132218685,2.68680578668049,1.08371286321253,1.83884244895785,0.30120591877825,0.739508020333575,3.48602402611357,1.56386155736164,3.52320527201817,0,1.20326668482085,2.17010870715852,0.895661896959697,2.26725566213286,0.257575567634187,0,0.377875943688809,0.485168122375632,0.232429036905685,0.411167888021826,0.309706370895104,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.449446968890169,0.612167784741805,0.641858054152187,0.639337125799041,0.329851300186716,0.598390972864896,0,0.290209238628584,0,0,0.251248665256743,0.521482918420201,0.65156653411535,0.605399502633369,0,0.316462387440884,0.211255286311942,0.425208599930087,0.419317291016752,0,0,0.16072558669708,0,1.19350006319454,0.730656615058536,17.5996244461323,18.0225741716503,24.9062591081795,26.0305435765569,30.4300950147369,21.2658402783159,25.1197051658248,25.7594513724548,13.6611112586268,21.1405388173538,15.6732023531344,1.32171328579026,2.24203425192614,2.63384084775077,7.27826149421182,7.07419372948497,8.42966145897988,3.67810289859492,17.2738801315803,17.9910166179199,29.2240092611867,3.11949279278486,8.24896540929544,9.30442357251209,11.3737622781307,5.76410938765538,6.50296737799391,4.27538551969558,5.80335037350282,5.21645554323094,10.5283459845063,15.2498272011136,12.5442628565972,6.11870450566857,8.43085085924227,11.6833331464094,12.1449452169361,21.0253173453904,21.4857539772618,11.4054245333805,17.4667138130216,17.7901389504642,12.4930726552346,15.1537441308171,12.3169199538157,13.3060450528323,5.08136371988664,13.4686695611003,0,0,0,0,0,0,0,0,0,0,0.263504357079378,0.327447688744282,1.09288586487763,1.11235332835329,0,0.174129737299267,0.26591592103773,0.715471872916026,1.71598473234038,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,3.87780264148325,3.05265836499774,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.818238361772504,0.860413786167011,0.121973706129595,0.265059536642971,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0.171567810298526,0.439001141634502,1.1240175325762,0.100528972411631,0.648119116109707,0,0,0,0,0,0,0,0,0,0.858486162094873,0.246217006087397,0.468008530278475,0,1.87467667973554,0.671928512795438,0.141775097242386,0,0,0,0,0.264145302039678,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,3.92298003977345,5.31983052545203,3.45004119775228,6.67383788654692,0.254094624222463,0,0,0,0,1.49801404789436,0,2.07207756718018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.44364894042395,4.09856981555372,7.68438416184799,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,1.80455823272956,0.920809889358963,0,0,0,1.35359883872224,1.23224539367064,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0,0,0.270946437543853,1.00337954770971,0.254876273045038,1.66215201785745,0.223874754722178,1.53481913652154,2.61435451024901,0.256450125116389,0.656029291399411,0.325378394664303,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15699440752685,0.768760269460425,1.78657797492418,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.673554789078584,1.34060455107157,1.08890984861323,0.470719003883896,2.15252686335615,3.36942951335251,4.87773168890343,2.98640420269047,13.1936378400364,8.41100927856613,8.54470780761244,11.9115887728895,13.5749550118444,10.3755729790835,7.56044012133361,14.2762531732969,0,0,0.980160863924127,5.20248890352012,0,4.33965244425326,5.10164072732231,1.79621434289535,1.34053759092657,1.48171507906718,2.27235358192189,0.842391534340376,0.228234679033192,0.783399478865116,0,1.35433422241283,0,0.201799707191048,0.425846237690326,0,0,0,0,0.390776190804081,2.78406173895242,2.46174797895425,0,0,0,0,0.146508179271894,0,4.45773537109913,0,0.23874448473769,0.593929361665277,0.614321404198464,0,0,0,0,0,0.19924798825107,10.4987887901836,0,0,3.07712013652674,0,1.07842021376792,1.79021174675609,0,0.394573622547734,0,0,0,0,0,0,0,0,1.137934482855,1.77977555204936,0.472775363535873,0,0,0,0,0,0,0,0,0,0,0,0.923403102045565,0,0.69169171316418,0.179515288819544,0.760531603454056,0,0.0915975934018623,0,3.06579894587209,0.156980256395025,1.32969345520125,0.225595660617181,0.588187602953219,0.503464760927528,0.569261198172555,1.90723894776454,0,0,0,0,0.995261931078505,0.973033209536731,0.611030144933625,0,0,0,0,0,0,1.094728735294,1.76098157038881,0,0.789168805698781,0,0,0.126373159256976,0,0,0,0,0,0,4.26914319044689,0,4.16543372004314,0.489961987071888,0.34823682632161,0.52418000472609,0,0,0,0,1.74580229679155,0,0.677942222341597,0,0,0.0633107959558787,1.75996244461323,2.32460578729448,0.85381197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| |||
|short_description=p4@TMC6 | |||
}} |
Latest revision as of 20:26, 17 September 2015
Short description: | p4@TMC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TMC6_5end |
Coexpression cluster: | C272_CD19_CD4_CD8_Whole_Peripheral_lymph_tonsil |
Association with transcript: | 0bp_to_ENST00000322914, NM_007267, uc002jul.1_5end |
EntrezGene: | TMC6 |
HGNC: | 18021 |
UniProt: | Q7Z403 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.69e-46 | 53 |
common lymphoid progenitor | 1.69e-46 | 53 |
lymphoid lineage restricted progenitor cell | 2.06e-45 | 52 |
hematopoietic stem cell | 1.06e-24 | 168 |
leukocyte | 9.76e-24 | 136 |
mature alpha-beta T cell | 5.17e-23 | 18 |
alpha-beta T cell | 5.17e-23 | 18 |
immature T cell | 5.17e-23 | 18 |
mature T cell | 5.17e-23 | 18 |
immature alpha-beta T cell | 5.17e-23 | 18 |
hematopoietic cell | 6.25e-23 | 177 |
T cell | 1.13e-22 | 25 |
pro-T cell | 1.13e-22 | 25 |
hematopoietic oligopotent progenitor cell | 4.09e-21 | 161 |
hematopoietic multipotent progenitor cell | 4.09e-21 | 161 |
lymphocyte of B lineage | 2.19e-20 | 24 |
pro-B cell | 2.19e-20 | 24 |
nongranular leukocyte | 5.90e-19 | 115 |
B cell | 5.33e-16 | 14 |
hematopoietic lineage restricted progenitor cell | 2.24e-15 | 120 |
CD8-positive, alpha-beta T cell | 2.89e-15 | 11 |
CD4-positive, alpha-beta T cell | 1.99e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.61e-09 | 15 |
haemolymphatic fluid | 1.61e-09 | 15 |
organism substance | 1.61e-09 | 15 |
neck | 3.53e-07 | 10 |
hemopoietic organ | 8.36e-07 | 7 |
immune organ | 8.36e-07 | 7 |