FFCP PHASE1:Hg19::chr17:78120897..78120913,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9775 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18683 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=24bp_to_uc002jxs.2_5end | |||
|cluster_id=chr17:78120897..78120913,- | |||
|description=CAGE_peak_2_at_EIF4A3_5end | |||
|id=chr17:78120897..78120913,- | |||
|ontology_enrichment_celltype=CL:0000012!1.58e-23!682;CL:0000548!4.02e-23!679;CL:0000004!4.02e-23!679;CL:0000255!4.02e-23!679;CL:0000063!9.62e-21!578;CL:0000763!1.17e-17!112;CL:0000049!1.17e-17!112;CL:0002032!2.49e-17!165;CL:0000837!2.49e-17!165;CL:0000037!3.69e-17!172;CL:0000566!3.69e-17!172;CL:0000003!3.06e-16!722;CL:0000988!1.34e-15!182;CL:0000860!1.42e-14!45;CL:0000557!3.46e-14!71;CL:0000766!4.07e-14!76;CL:0000839!1.36e-13!70;CL:0000738!1.91e-13!140;CL:0002057!2.16e-13!42;CL:0002031!2.93e-13!124;CL:0002009!4.08e-12!65;CL:0002194!3.03e-11!63;CL:0000576!3.03e-11!63;CL:0000040!3.03e-11!63;CL:0000559!3.03e-11!63;CL:0000219!9.16e-11!390;CL:0000134!3.37e-10!358;CL:0002320!1.17e-09!365;CL:0002087!2.22e-09!119;CL:0000144!2.88e-09!625;CL:0000034!3.47e-09!444;CL:0000723!1.07e-08!436;CL:0000048!1.87e-08!430;CL:0002371!2.94e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-15;33!CL:0002057;1.10e-15;33!CL:0000473;1.17e-10;39!CL:0000234;1.17e-10;39!CL:0000576;8.21e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,4.75e-17,108;CL:0000049,4.75e-17,108;CL:0002032,1.07e-16,161;CL:0000837,1.07e-16,161;CL:0000037,1.58e-16,168;CL:0000988,8.70e-15,177;CL:0000557,1.22e-13,67;CL:0000766,1.47e-13,72;CL:0000860,2.16e-13,42;CL:0002057,2.16e-13,42;CL:0000839,4.80e-13,66;CL:0000738,7.34e-13,136;CL:0002031,1.12e-12,120;CL:0002009,1.42e-11,61;CL:0000473,2.76e-11,48;CL:0000234,2.76e-11,48;CL:0002194,1.05e-10,59;CL:0000576,1.05e-10,59;CL:0000040,1.05e-10,59;CL:0000559,1.05e-10,59;CL:0000219,6.85e-10,386;CL:0000134,2.36e-09,354;CL:0002087,7.45e-09,115;CL:0002320,7.74e-09,361;CL:0000034,1.87e-08,441;CL:0000723,5.44e-08,433;CL:0000048,9.22e-08,427 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-10;42 | |||
|ontology_enrichment_disease=DOID:14566!2.36e-22!239;DOID:162!2.52e-22!235;DOID:305!1.25e-16!106;DOID:0050687!1.25e-12!143;DOID:0050686!8.23e-11!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,2.36e-22,239;DOID:162,2.52e-22,235;DOID:305,1.25e-16,106;DOID:0050687,1.25e-12,143;DOID:0050686,8.23e-11,137 | |||
|ontology_enrichment_uberon=UBERON:0001474!1.06e-13!86;UBERON:0002371!1.43e-13!80;UBERON:0004765!1.22e-12!101;UBERON:0001434!1.22e-12!101;UBERON:0002384!7.53e-10!375;UBERON:0002405!1.30e-08!115;UBERON:0002390!1.57e-07!102;UBERON:0003061!1.57e-07!102;UBERON:0001737!5.15e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.87e-07;9!UBERON:0001557;4.87e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.94e-13,82;UBERON:0002371,5.23e-13,76;UBERON:0004765,1.54e-12,90;UBERON:0001434,1.19e-11,100;UBERON:0002405,4.51e-10,93;UBERON:0002384,5.08e-09,371;UBERON:0002390,4.90e-07,98;UBERON:0003061,4.90e-07,98;UBERON:0001737,5.15e-07,9 | |||
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| |||
|short_description=p2@EIF4A3 | |||
}} |
Latest revision as of 03:31, 18 September 2015
Short description: | p2@EIF4A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_EIF4A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_uc002jxs.2_5end |
EntrezGene: | EIF4A3 |
HGNC: | 18683 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 4.75e-17 | 108 |
common myeloid progenitor | 4.75e-17 | 108 |
hematopoietic oligopotent progenitor cell | 1.07e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.07e-16 | 161 |
hematopoietic stem cell | 1.58e-16 | 168 |
hematopoietic cell | 8.70e-15 | 177 |
granulocyte monocyte progenitor cell | 1.22e-13 | 67 |
myeloid leukocyte | 1.47e-13 | 72 |
classical monocyte | 2.16e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.16e-13 | 42 |
myeloid lineage restricted progenitor cell | 4.80e-13 | 66 |
leukocyte | 7.34e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 1.12e-12 | 120 |
macrophage dendritic cell progenitor | 1.42e-11 | 61 |
defensive cell | 2.76e-11 | 48 |
phagocyte | 2.76e-11 | 48 |
monopoietic cell | 1.05e-10 | 59 |
monocyte | 1.05e-10 | 59 |
monoblast | 1.05e-10 | 59 |
promonocyte | 1.05e-10 | 59 |
motile cell | 6.85e-10 | 386 |
mesenchymal cell | 2.36e-09 | 354 |
nongranular leukocyte | 7.45e-09 | 115 |
connective tissue cell | 7.74e-09 | 361 |
stem cell | 1.87e-08 | 441 |
somatic stem cell | 5.44e-08 | 433 |
multi fate stem cell | 9.22e-08 | 427 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.94e-13 | 82 |
bone marrow | 5.23e-13 | 76 |
skeletal element | 1.54e-12 | 90 |
skeletal system | 1.19e-11 | 100 |
immune system | 4.51e-10 | 93 |
connective tissue | 5.08e-09 | 371 |
hematopoietic system | 4.90e-07 | 98 |
blood island | 4.90e-07 | 98 |
larynx | 5.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.36e-22 | 239 |
cancer | 2.52e-22 | 235 |
carcinoma | 1.25e-16 | 106 |
cell type cancer | 1.25e-12 | 143 |
organ system cancer | 8.23e-11 | 137 |