FFCP PHASE1:Hg19::chr18:39766626..39766644,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-5bp_to_uc002las.1,uc002lat.2,uc002lau.2_5end | |||
|cluster_id=chr18:39766626..39766644,+ | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_1_at_uc002las.1_5end,CAGE_peak_1_at_uc002lat.2_5end,CAGE_peak_1_at_uc002lau.2_5end | |||
|id=chr18:39766626..39766644,+ | |||
|ontology_enrichment_celltype=CL:0002178!5.77e-14!3 | |||
|ontology_enrichment_celltype_v019=CL:0000243;2.14e-10;15!CL:0000125;2.14e-10;15!CL:0000095;2.08e-09;17!CL:0002319;6.62e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000243,2.14e-10,15;CL:0000125,2.14e-10,15;CL:0000030,2.14e-10,15;CL:0000339,2.14e-10,15;CL:0000095,2.08e-09,17;CL:0000123,2.08e-09,17;CL:0002319,6.62e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006238;1.74e-15;10!UBERON:0003056;1.22e-14;3!CL:0000339;2.14e-10;15 | |||
|ontology_enrichment_disease=DOID:3151!2.42e-11!1;DOID:3149!2.42e-11!1;DOID:0050619!2.68e-11!1;DOID:1357!2.68e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:3093;2.75e-14;11!DOID:5409;2.80e-11;4!DOID:1325;5.38e-07;7!DOID:3904;5.38e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,2.75e-14,11;DOID:5409,2.80e-11,4;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001905!2.31e-21!2;UBERON:0002757!2.31e-21!2;UBERON:0010134!2.31e-21!2;UBERON:0002784!2.31e-21!2;UBERON:0005408!2.31e-21!2;UBERON:0001899!2.31e-21!2;UBERON:0000945!1.16e-11!8;UBERON:0010039!1.16e-11!8;UBERON:0001764!2.68e-11!1;UBERON:0001825!2.68e-11!1;UBERON:0003296!3.64e-11!4;UBERON:0010133!3.64e-11!4;UBERON:0002363!6.00e-11!1;UBERON:0007647!6.00e-11!1;UBERON:0010115!6.00e-11!1;UBERON:0001894!9.65e-07!7;UBERON:0006222!9.65e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;6.30e-21;2!UBERON:0002757;6.30e-21;2!UBERON:0010134;6.30e-21;2!UBERON:0005408;6.30e-21;2!UBERON:0001899;6.30e-21;2!UBERON:0003296;3.60e-11;4!UBERON:0010133;3.60e-11;4!UBERON:0002784;3.60e-11;4!UBERON:0000966;2.53e-09;5!UBERON:0005388;2.53e-09;5!UBERON:0001802;2.53e-09;5!UBERON:0001894;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,6.96e-21,2;UBERON:0002757,6.96e-21,2;UBERON:0010134,6.96e-21,2;UBERON:0005408,6.96e-21,2;UBERON:0001899,6.96e-21,2;UBERON:0003296,3.79e-11,4;UBERON:0010133,3.79e-11,4;UBERON:0002784,3.79e-11,4;UBERON:0000966,5.54e-08,6;UBERON:0005388,5.54e-08,6;UBERON:0001802,5.54e-08,6;UBERON:0001894,6.39e-07,7;UBERON:0006222,6.39e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.246301768349837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6001024709939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,16.186790287539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.672567444437648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,745.350206543271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,20.229055081159,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p1@uc002las.1,p1@uc002lat.2,p1@uc002lau.2 | |||
}} |
Latest revision as of 00:51, 26 July 2015
Short description: | p1@uc002las.1, p1@uc002lat.2, p1@uc002lau.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002las.1_5end, CAGE_peak_1_at_uc002lat.2_5end, CAGE_peak_1_at_uc002lau.2_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | -5bp_to_uc002las.1, uc002lat.2, uc002lau.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glial cell (sensu Vertebrata) | 2.14e-10 | 15 |
glial cell | 2.14e-10 | 15 |
glioblast | 2.14e-10 | 15 |
glioblast (sensu Vertebrata) | 2.14e-10 | 15 |
neuron associated cell | 2.08e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 2.08e-09 | 17 |
neural cell | 6.62e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
pineal body | 6.96e-21 | 2 |
regional part of epithalamus | 6.96e-21 | 2 |
secretory circumventricular organ | 6.96e-21 | 2 |
circumventricular organ | 6.96e-21 | 2 |
epithalamus | 6.96e-21 | 2 |
gland of diencephalon | 3.79e-11 | 4 |
neuroendocrine gland | 3.79e-11 | 4 |
regional part of diencephalon | 3.79e-11 | 4 |
retina | 5.54e-08 | 6 |
photoreceptor array | 5.54e-08 | 6 |
posterior segment of eyeball | 5.54e-08 | 6 |
diencephalon | 6.39e-07 | 7 |
future diencephalon | 6.39e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 2.75e-14 | 11 |
lung small cell carcinoma | 2.80e-11 | 4 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |