FFCP PHASE1:Hg19::chr19:33572124..33572129,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24658 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BRR8 | |||
|association_with_transcript=19bp_to_AL834465_5end | |||
|cluster_id=chr19:33572124..33572129,+ | |||
|description=CAGE_peak_3_at_GPATCH1_5end | |||
|id=chr19:33572124..33572129,+ | |||
|ontology_enrichment_celltype=CL:0000542!5.50e-09!53;CL:0000051!5.50e-09!53;CL:0000838!9.24e-09!52;CL:0000084!2.37e-08!25;CL:0000827!2.37e-08!25;CL:0000037!4.19e-07!172;CL:0000566!4.19e-07!172;CL:0000988!5.87e-07!182;CL:0000791!6.69e-07!18;CL:0000789!6.69e-07!18;CL:0002420!6.69e-07!18;CL:0002419!6.69e-07!18;CL:0000790!6.69e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.13e-11;18!CL:0000789;1.13e-11;18!CL:0002419;1.13e-11;18!CL:0000625;5.63e-09;11!CL:0000084;1.39e-08;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.11e-11,18;CL:0000789,1.11e-11,18;CL:0002420,1.11e-11,18;CL:0002419,1.11e-11,18;CL:0000790,1.11e-11,18;CL:0000625,5.87e-09,11;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25;CL:0000838,3.75e-07,52;CL:0000542,5.04e-07,53;CL:0000051,5.04e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;1.13e-11;18!UBERON:0006215;1.17e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.45e-12;2!UBERON:0002757;2.45e-12;2!UBERON:0010134;2.45e-12;2!UBERON:0005408;2.45e-12;2!UBERON:0001899;2.45e-12;2!UBERON:0003296;8.37e-07;4!UBERON:0010133;8.37e-07;4!UBERON:0002784;8.37e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,2.90e-12,2;UBERON:0002757,2.90e-12,2;UBERON:0010134,2.90e-12,2;UBERON:0005408,2.90e-12,2;UBERON:0001899,2.90e-12,2;UBERON:0003296,9.11e-07,4;UBERON:0010133,9.11e-07,4;UBERON:0002784,9.11e-07,4 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0.245733936501509,0,0.218441372130172,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0.0764134057479513,0.0821005894499457,0,0.393364276848904,0.767658796194425,0.309632246632152,0,0,0,0.309868802321207,0,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0.182664153764634,0,1.09227722252426,0,0.853460445133014,0,0,0.661044872784862,0,0,0,0.764546456250458,0,0.560508562981536,0,1.180258620683,0.393010762749165,0.616804496998528,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0.766440987203842,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.255973222308837,1.24930726552346,0,0.821127996921047,0.403213486449465,0.534880391567015,1.01377082717959,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0.324547393654683,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0,0,0.0974370051611986,0.504867548488229,0,0,0,0.10075209822764,0,0,0.272746120590835,0,0.243947412259191,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.337169380156203,0,0.220587945464788,0,0,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.737930631258681,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.352193736052904,0,0,0.25248486685276,0.126995788584338,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.431255149719035,0.898401253958239,0.254094624222463,0,0,0.167516265334349,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0.620304078368662,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,0.241718899183244,0,0.276242966807689,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0,0,0,0,0.412164046590889,0.366277859273374,0.082509499920588,0,0,0,0.290012154876366,0,0,0,0.107420244868274,0,0,0.356128142586949,0.165284915360978,0.192190067365106,0.510450849978337,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.144269212976445,0.0711418433484141,0.159426272728822,0.199579371432817,0.766021480529467,0.211673582723883,0,0.280797178113459,0,0.47003968731907,0,0.50787533340481,0.1605880751037,0,0.425846237690326,0.343505344755765,0,0,0.166849141711909,0.19538809540204,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0.293016358543788,0.121360521749513,0.334330152832435,0,0,0,0.614321404198464,0,0.422008249231538,0.111308705022906,0.329607748453519,0.844501632511974,0,0,0,0,0.369254416383208,0,0.179736702294654,0,0,0,0,0,0,0.185536196323703,0,0.520855522170466,0.174919999992391,0,0,0,0.236387681767936,0,0.291604613383254,0,0,0.60298219312704,1.52581736317083,0.221158519862449,0.295547618953547,0.438770794307945,0.10893846351899,0,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0.816164040795739,0,0,0,0.176915129006678,0,0.296521128680622,0.123563938946503,0.313265848516366,0.471807930864739,0,0,0,0,0,0,0,0.30607276163049,0.189559738885464,4.66002600184927,0.414752765588989,0,0,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0,0.17472666824203,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.0969890164884194,0.264768380074501,0,0,0,0.316553979779393,0.195551382734803,0,0.213452994739353,0.39961921916426,0.144090417154106,0.114536596165916,0.686379991447858,0.14405479798815,0,0,0,0,0,0,0,0.958337652243951,0,0,0.262887354279314,0,0,0.717873024576814,0,0,0.223171457441873,0.134366944973453,0,1.16495949527454,0.0787831823072236,0.247247575143499,0.0674035438541849,0.295282444544246,0.254019996197353,0,0.136203406111576,0,0.275078873194468,0,0.899895566206002,0,0.485996453264197,0,0,0.104909176269996,0.105600336519406,0,0.191915197319445,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.387848869084652,0.26446520348538,0,0.704815022316672,0,0,0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| |||
|short_description=p3@GPATCH1 | |||
}} |
Latest revision as of 06:24, 17 September 2015
Short description: | p3@GPATCH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GPATCH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_AL834465_5end |
EntrezGene: | GPATCH1 |
HGNC: | 24658 |
UniProt: | Q9BRR8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.11e-11 | 18 |
alpha-beta T cell | 1.11e-11 | 18 |
immature T cell | 1.11e-11 | 18 |
mature T cell | 1.11e-11 | 18 |
immature alpha-beta T cell | 1.11e-11 | 18 |
CD8-positive, alpha-beta T cell | 5.87e-09 | 11 |
T cell | 1.37e-08 | 25 |
pro-T cell | 1.37e-08 | 25 |
lymphoid lineage restricted progenitor cell | 3.75e-07 | 52 |
lymphocyte | 5.04e-07 | 53 |
common lymphoid progenitor | 5.04e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
pineal body | 2.90e-12 | 2 |
regional part of epithalamus | 2.90e-12 | 2 |
secretory circumventricular organ | 2.90e-12 | 2 |
circumventricular organ | 2.90e-12 | 2 |
epithalamus | 2.90e-12 | 2 |
gland of diencephalon | 9.11e-07 | 4 |
neuroendocrine gland | 9.11e-07 | 4 |
regional part of diencephalon | 9.11e-07 | 4 |