FFCP PHASE1:Hg19::chr19:43969748..43969768,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27076 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24880 | |||
|TSSclassifier=strong | |||
|UniProt=E7ET82 | |||
|association_with_transcript=-3bp_to_ENST00000377995_5end | |||
|cluster_id=chr19:43969748..43969768,- | |||
|coexpression_cluster_id=C665 | |||
|description=CAGE_peak_1_at_LYPD3_5end | |||
|id=chr19:43969748..43969768,- | |||
|ontology_enrichment_celltype=CL:0000066!6.98e-18!254;CL:0000860!1.77e-14!45;CL:0002076!3.70e-14!43;CL:0002057!9.47e-13!42;CL:0000223!1.40e-09!59;CL:0002368!3.24e-09!13;CL:0000557!5.64e-09!71;CL:0002009!1.15e-08!65;CL:0000766!2.06e-08!76;CL:0000839!1.09e-07!70;CL:0002194!1.26e-07!63;CL:0000576!1.26e-07!63;CL:0000040!1.26e-07!63;CL:0000559!1.26e-07!63;CL:0002159!4.19e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.63e-15;33!CL:0002057;5.63e-15;33!CL:0002368;5.06e-11;13!CL:0002076;1.27e-10;42!CL:0000473;8.05e-10;39!CL:0000234;8.05e-10;39!CL:0002159;3.53e-09;14!CL:0000622;3.55e-08;5!CL:0000349;1.23e-07;19!CL:0000576;2.21e-07;48!CL:0002202;3.01e-07;9!CL:0002632;3.01e-07;9!CL:0000244;5.97e-07;4!CL:0000731;5.97e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.02e-14,42;CL:0002057,1.02e-14,42;CL:0002076,4.34e-13,42;CL:0000066,6.52e-13,253;CL:0000473,6.26e-12,48;CL:0000234,6.26e-12,48;CL:0002368,5.21e-11,13;CL:0000557,3.06e-10,67;CL:0002009,1.67e-09,61;CL:0000223,3.77e-09,58;CL:0002159,3.83e-09,14;CL:0000839,1.26e-08,66;CL:0000622,3.45e-08,5;CL:0002194,3.87e-08,59;CL:0000576,3.87e-08,59;CL:0000040,3.87e-08,59;CL:0000559,3.87e-08,59;CL:0000766,5.97e-08,72;CL:0000349,1.10e-07,19;CL:0002202,2.94e-07,9;CL:0002632,2.94e-07,9;CL:0000244,6.02e-07,4;CL:0000731,6.02e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002057;1.65e-11;42 | |||
|ontology_enrichment_disease=DOID:305!6.41e-12!106;DOID:1749!9.70e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.14e-07;14!DOID:5093;9.58e-07;4!DOID:1612;9.58e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.24e-07,14;DOID:5093,8.98e-07,4;DOID:1612,8.98e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.61e-17!72;UBERON:0004119!9.58e-15!169;UBERON:0000925!9.58e-15!169;UBERON:0006595!9.58e-15!169;UBERON:0000065!5.83e-12!53;UBERON:0000161!1.26e-11!35;UBERON:0000072!4.36e-11!46;UBERON:0000077!4.89e-11!130;UBERON:0000166!4.39e-10!21;UBERON:0005631!8.14e-10!14;UBERON:0000158!8.14e-10!14;UBERON:0000062!1.14e-09!511;UBERON:0001007!2.57e-09!155;UBERON:0001555!2.57e-09!155;UBERON:0007026!2.57e-09!155;UBERON:0008947!1.94e-08!38;UBERON:0003258!1.94e-08!38;UBERON:0001041!2.62e-08!98;UBERON:0004921!9.51e-08!129;UBERON:0004185!9.51e-08!129;UBERON:0003124!1.88e-07!7;UBERON:0001557!2.87e-07!19;UBERON:0000165!3.22e-07!28;UBERON:0000930!3.22e-07!28;UBERON:0000468!3.23e-07!659;UBERON:0002371!8.93e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.82e-09;10!UBERON:0000158;6.82e-09;10!UBERON:0000161;2.42e-08;19!UBERON:0000166;2.42e-08;19!UBERON:0000165;3.33e-08;28!UBERON:0000478;7.05e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,7.23e-14,74;UBERON:0005631,9.38e-14,14;UBERON:0000158,9.38e-14,14;UBERON:0004119,7.25e-12,160;UBERON:0000925,7.25e-12,160;UBERON:0006595,7.25e-12,160;UBERON:0000161,1.97e-10,36;UBERON:0000166,5.88e-10,22;UBERON:0003124,6.23e-10,7;UBERON:0000065,4.59e-09,54;UBERON:0002371,4.19e-08,76;UBERON:0000478,6.50e-08,24;UBERON:0000165,9.28e-08,29;UBERON:0000930,9.28e-08,29;UBERON:0004765,1.48e-07,90;UBERON:0000072,1.65e-07,47;UBERON:0002405,4.88e-07,93;UBERON:0001474,5.70e-07,82;UBERON:0000153,7.66e-07,62;UBERON:0007811,7.66e-07,62 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0.697801167972428,14.6355719327215,18.4636884759917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,1.23852898652861,24.824373060931,30.7230037153815,20.7062245693401,0,0,0,3.87796785972314,2.80762226458198,2.38711957787437,0,0,0,0.872389432677388,1.51150377475524,1.21292030593908,6.50801303335917,2.87817521615278,5.26500830521676,0.28769239232215,1.2808035326455,1.18241114944293,5.17118521104928,16.1371170895957,6.77132432971709,5.83551252582075,3.547779950752,3.59557575112135,29.6901375599776,11.5534449747394,19.8194508997703,0,0.598390972864896,0,53.1082906690309,55.6037520197317,52.3170689156283,0,1.5644487552606,0.868755378820466,29.6645756290351,22.4649357952414,14.8737322097216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0,0,0.289693037921647,0,1.94653948121054,0,0.221729397462564,0.263504357079378,0.523916301990851,60.8373131448545,74.5276729996703,0,0,0.26591592103773,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,52.3312862571041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,2.37600571456411,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0.323292113637624,0,0,0.169560592310488,14.1080422809207,24.0016586119934,24.9519997988433,0.243947412259191,0,0.348581828608555,1.24393266018445,0.252320850875628,0,0,0,0,0,0,1.18306800039844,0.674338760312407,0.964044119533928,1.10293972732394,0.871517776369625,0.949082476444386,2.69662616320329,0.98110732562673,1.53898862778556,0,0,0,0,0,0,0,0,0,0,17.011294238337,5.62008766288098,16.9893963375656,6.85154494173119,0,0,0,0,0,0,0,0,46.6220594795972,35.1979326458898,0,0,0,8.43604505880993,3.19166043577833,7.08875486211932,0.268675568108545,1.45316969256981,4.21720947081732,0,0,2.07328115540772,1.58531948758658,1.2624243342638,0.380987365753014,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,1.28073069364133,17.8845267153293,11.6504807657348,41.7298604794959,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0.120859449591622,8.02025881213139,6.90607417019222,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0,0,24.6934181338354,47.454397960666,0,0,0,0,0,0,0,0,0,5.12383237619032,4.61256161676255,2.29702882490251,6.67641353646629,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,5.67710465080521,16.0872546128589,9.80018863751903,2.07116361708914,10.7626343167807,101.082885400575,84.6951593255051,13.7834040124176,0,0,0,0,0,0,0,0,0,0,2.45040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,181.445808400644,13.957339999134,191.053956705722,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0,0,0.358042349351218,0,4.14302303675121,0,0,0,0,0,15.625665665114,7.87139999965761,0.724999575434793,0.455173793141999,1.5255219017566,7.8007934983419,0,0,0,0,0,0,0,0,0,4.35753854075961,65.8080072995008,36.8591738233188,0,3.68902247020896,1.70539524378567,4.34589487688032,39.556143806758,1.92354946143911,12.7928346244472,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,1.36965233252463,0,0,0,0,0,0,0,7.31119259977904,0.661983911750998,3.45326210247948,0,0.284609546029793,0,0.867798691675654,17.9326087268311,6.09414446062818,0.34945333648406,0,3.38647159511798,2.55812609801649,3.36673373918158,142.088909155534,0,5.87549926029384,0,0,0,7.23540116118771,2.40476460754601,0,0,0,0,0,0.288109595976299,0,19.562604873194,0,0,0,0,0,0,0,0,0,0,0,0,12.3800980309374,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,6.29926896344201,86.6658189104904,0,30.5245565715332,0.236417121897595,0.0524545881349981,0.739202355635845,0,17.0804525614306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.7348206248668,0,0,0,0,0,0,2.55336503108073,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0.124980407962107,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0.457680136793847,0,0.310874401165561,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0.926404341482917,0,0.176689145945881,0.38582807654183,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0.211312123358627,0,0,0,0,0,15.3867458491389,17.4181632809232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23887471053385,1.06172751012966,16.1417166699078,0.577628330751691,0,0,0,0.150420656698515,0,0,2.09525355585138,0,1.47856086217045,0,0,0,0,0,0,7.44316767583941,0,0.127762427639595,0,0,0,0,9.1363441267518,0,0,0,0,2.48207065856333,1.89093383216518,0.706437835654626,0,7.00680408284473,0,0,0,0,0,0,0,0,5.80205259656503,16.2182553239252,210.834196853298,1.72090943528111,0,0,0,0.4582137370881,0,0,7.71802479404767,0.883352102537187,0,0.647428837187895,0,0,34.4854805071989,0,0,0,0,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| |||
|short_description=p1@LYPD3 | |||
}} |
Latest revision as of 11:01, 18 September 2015
Short description: | p1@LYPD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LYPD3_5end |
Coexpression cluster: | C665_amniotic_esophagus_tongue_Corneal_tonsil_salivary_Urothelial |
Association with transcript: | -3bp_to_ENST00000377995_5end |
EntrezGene: | LYPD3 |
HGNC: | 24880 |
UniProt: | E7ET82 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.02e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.02e-14 | 42 |
endo-epithelial cell | 4.34e-13 | 42 |
epithelial cell | 6.52e-13 | 253 |
defensive cell | 6.26e-12 | 48 |
phagocyte | 6.26e-12 | 48 |
respiratory epithelial cell | 5.21e-11 | 13 |
granulocyte monocyte progenitor cell | 3.06e-10 | 67 |
macrophage dendritic cell progenitor | 1.67e-09 | 61 |
endodermal cell | 3.77e-09 | 58 |
general ecto-epithelial cell | 3.83e-09 | 14 |
myeloid lineage restricted progenitor cell | 1.26e-08 | 66 |
acinar cell | 3.45e-08 | 5 |
monopoietic cell | 3.87e-08 | 59 |
monocyte | 3.87e-08 | 59 |
monoblast | 3.87e-08 | 59 |
promonocyte | 3.87e-08 | 59 |
myeloid leukocyte | 5.97e-08 | 72 |
extraembryonic cell | 1.10e-07 | 19 |
epithelial cell of tracheobronchial tree | 2.94e-07 | 9 |
epithelial cell of lower respiratory tract | 2.94e-07 | 9 |
transitional epithelial cell | 6.02e-07 | 4 |
urothelial cell | 6.02e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 7.23e-14 | 74 |
extraembryonic membrane | 9.38e-14 | 14 |
membranous layer | 9.38e-14 | 14 |
endoderm-derived structure | 7.25e-12 | 160 |
endoderm | 7.25e-12 | 160 |
presumptive endoderm | 7.25e-12 | 160 |
orifice | 1.97e-10 | 36 |
oral opening | 5.88e-10 | 22 |
chorion | 6.23e-10 | 7 |
respiratory tract | 4.59e-09 | 54 |
bone marrow | 4.19e-08 | 76 |
extraembryonic structure | 6.50e-08 | 24 |
mouth | 9.28e-08 | 29 |
stomodeum | 9.28e-08 | 29 |
skeletal element | 1.48e-07 | 90 |
segment of respiratory tract | 1.65e-07 | 47 |
immune system | 4.88e-07 | 93 |
bone element | 5.70e-07 | 82 |
anterior region of body | 7.66e-07 | 62 |
craniocervical region | 7.66e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.24e-07 | 14 |
thoracic cancer | 8.98e-07 | 4 |
breast cancer | 8.98e-07 | 4 |