FFCP PHASE1:Hg19::chr1:157963391..157963454,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55243 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15734 | |||
|TSSclassifier=strong | |||
|UniProt=Q96J84,B4DN67 | |||
|association_with_transcript=0bp_to_ENST00000359209,ENST00000416935_5end | |||
|cluster_id=chr1:157963391..157963454,+ | |||
|description=CAGE_peak_1_at_KIRREL_5end | |||
|id=chr1:157963391..157963454,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.51e-39!180;CL:0000220!2.68e-23!246;CL:0002321!6.53e-23!248;CL:0000057!5.09e-19!75;CL:0000222!4.81e-15!119;CL:0000183!7.14e-14!59;CL:0000680!9.50e-13!57;CL:0000056!9.50e-13!57;CL:0000355!9.50e-13!57;CL:0000187!1.12e-12!54;CL:0000192!1.32e-10!42;CL:0000514!1.32e-10!42;CL:0000393!1.36e-10!60;CL:0000211!1.36e-10!60;CL:0000499!1.00e-08!27;CL:0000548!1.10e-08!679;CL:0000004!1.10e-08!679;CL:0000255!1.10e-08!679;CL:0000144!1.38e-08!625;CL:0000012!4.87e-08!682;CL:0000359!6.10e-08!32;CL:0002371!1.24e-07!591;CL:0000066!2.08e-07!254;CL:1000507!2.52e-07!12;CL:1000494!2.52e-07!12;CL:1000497!3.93e-07!18;CL:0002518!3.93e-07!18;CL:0002620!6.00e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000499;4.26e-09;28!CL:1000507;5.08e-08;10!CL:1000494;5.08e-08;10!CL:0000192;5.66e-08;43!CL:0000057;6.41e-08;73!CL:0002320;1.10e-07;188!CL:0000359;1.78e-07;32!CL:0000187;1.91e-07;55!CL:1000497;6.02e-07;17!CL:0002518;6.02e-07;17!CL:0002620;6.15e-07;23!CL:0000327;9.28e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.85e-22,250;CL:0000057,1.56e-19,76;CL:0000222,7.23e-15,121;CL:0000680,5.04e-13,58;CL:0000056,5.04e-13,58;CL:0000355,5.04e-13,58;CL:0000187,5.95e-13,55;CL:0000192,7.23e-11,43;CL:0000514,7.23e-11,43;CL:0000393,7.50e-11,61;CL:0000211,7.50e-11,61;CL:0000499,3.94e-09,28;CL:1000507,5.02e-08,10;CL:1000494,5.02e-08,10;CL:0000359,5.71e-08,32;CL:0000066,4.17e-07,253;CL:0002620,5.67e-07,23;CL:1000497,5.89e-07,17;CL:0002518,5.89e-07,17;CL:0000327,8.90e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;5.66e-08;43!CL:0000355;1.69e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.66e-19!365;UBERON:0005256!1.03e-17!143;UBERON:0000486!1.34e-16!82;UBERON:0002100!1.68e-16!216;UBERON:0000914!2.68e-15!83;UBERON:0002329!2.68e-15!83;UBERON:0003077!2.68e-15!83;UBERON:0003059!2.68e-15!83;UBERON:0007282!2.68e-15!83;UBERON:0009618!2.68e-15!83;UBERON:0007285!2.68e-15!83;UBERON:0000481!4.94e-14!347;UBERON:0003104!9.09e-14!238;UBERON:0009142!9.09e-14!238;UBERON:0004290!2.83e-13!70;UBERON:0003102!1.21e-12!95;UBERON:0000119!3.28e-12!312;UBERON:0000483!7.42e-12!309;UBERON:0001134!7.82e-12!61;UBERON:0002036!7.82e-12!61;UBERON:0003082!7.82e-12!61;UBERON:0002385!2.06e-11!63;UBERON:0001015!2.06e-11!63;UBERON:0000383!2.06e-11!63;UBERON:0000468!2.25e-11!659;UBERON:0003914!1.27e-10!118;UBERON:0002199!4.44e-09!45;UBERON:0002416!4.44e-09!45;UBERON:0002097!1.20e-08!40;UBERON:0000467!2.98e-08!625;UBERON:0000480!5.04e-08!626;UBERON:0004872!5.20e-08!84;UBERON:0002049!6.54e-08!79;UBERON:0007798!6.54e-08!79;UBERON:0000490!1.13e-07!138;UBERON:0003103!2.50e-07!69;UBERON:0009773!2.52e-07!12;UBERON:0001231!2.52e-07!12;UBERON:0004810!2.52e-07!12;UBERON:0002050!3.51e-07!605;UBERON:0005423!3.51e-07!605;UBERON:0000922!4.03e-07!612;UBERON:0000923!5.07e-07!604;UBERON:0005291!5.07e-07!604;UBERON:0006598!5.07e-07!604;UBERON:0002532!5.07e-07!604;UBERON:0001637!8.90e-07!42;UBERON:0003509!8.90e-07!42;UBERON:0004572!8.90e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.08e-08;10!UBERON:0009773;5.08e-08;10!UBERON:0001231;5.08e-08;10!UBERON:0004810;5.08e-08;10!UBERON:0002384;3.96e-07;198!UBERON:0002097;7.61e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.12e-18,160;UBERON:0009142,9.12e-18,160;UBERON:0000486,6.68e-17,83;UBERON:0002100,1.02e-14,199;UBERON:0007503,2.85e-14,78;UBERON:0002329,1.49e-13,71;UBERON:0003059,1.49e-13,71;UBERON:0007282,1.49e-13,71;UBERON:0004290,1.49e-13,71;UBERON:0009618,1.49e-13,71;UBERON:0007524,1.56e-13,73;UBERON:0003077,3.84e-13,72;UBERON:0007285,3.84e-13,72;UBERON:0003102,1.04e-12,99;UBERON:0001134,4.22e-12,62;UBERON:0002036,4.22e-12,62;UBERON:0003082,4.22e-12,62;UBERON:0005256,8.76e-12,122;UBERON:0002385,1.12e-11,64;UBERON:0001015,1.12e-11,64;UBERON:0000383,1.12e-11,64;UBERON:0000119,2.06e-11,309;UBERON:0000483,4.54e-11,306;UBERON:0003914,3.43e-10,117;UBERON:0002199,3.80e-09,46;UBERON:0002416,3.80e-09,46;UBERON:0000490,6.49e-09,148;UBERON:0002097,1.04e-08,41;UBERON:0004810,5.02e-08,10;UBERON:0004872,8.98e-08,83;UBERON:0002049,1.17e-07,78;UBERON:0007798,1.17e-07,78;UBERON:0003103,3.55e-07,68;UBERON:0001637,8.43e-07,42;UBERON:0003509,8.43e-07,42;UBERON:0004572,8.43e-07,42 | |||
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| |||
|short_description=p1@KIRREL | |||
}} |
Latest revision as of 19:56, 17 September 2015
Short description: | p1@KIRREL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIRREL_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359209, ENST00000416935_5end |
EntrezGene: | KIRREL |
HGNC: | 15734 |
UniProt: | Q96J84B4DN67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.85e-22 | 250 |
fibroblast | 1.56e-19 | 76 |
mesodermal cell | 7.23e-15 | 121 |
muscle precursor cell | 5.04e-13 | 58 |
myoblast | 5.04e-13 | 58 |
multi-potent skeletal muscle stem cell | 5.04e-13 | 58 |
muscle cell | 5.95e-13 | 55 |
smooth muscle cell | 7.23e-11 | 43 |
smooth muscle myoblast | 7.23e-11 | 43 |
electrically responsive cell | 7.50e-11 | 61 |
electrically active cell | 7.50e-11 | 61 |
stromal cell | 3.94e-09 | 28 |
kidney tubule cell | 5.02e-08 | 10 |
nephron tubule epithelial cell | 5.02e-08 | 10 |
vascular associated smooth muscle cell | 5.71e-08 | 32 |
epithelial cell | 4.17e-07 | 253 |
skin fibroblast | 5.67e-07 | 23 |
kidney cell | 5.89e-07 | 17 |
kidney epithelial cell | 5.89e-07 | 17 |
extracellular matrix secreting cell | 8.90e-07 | 15 |