FFCP PHASE1:Hg19::chr1:158224254..158224274,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=909 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1634 | |||
|TSSclassifier=strong | |||
|UniProt=P06126 | |||
|association_with_transcript=327bp_to_ENST00000289429,NM_001763,uc001frt.2_5end | |||
|cluster_id=chr1:158224254..158224274,+ | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_5_at_CD1A_5end | |||
|id=chr1:158224254..158224274,+ | |||
|ontology_enrichment_celltype=CL:0000840!4.42e-36!5;CL:0001029!4.42e-36!5;CL:0000990!4.82e-24!8;CL:0000451!1.17e-19!10;CL:0001014!1.59e-18!2;CL:0001016!1.59e-18!2;CL:0000453!6.08e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000840;1.31e-75;5!CL:0000990;1.50e-50;8!CL:0000451;2.00e-41;10!CL:0001014;1.30e-37;2!CL:0001016;1.30e-37;2!CL:0000453;1.05e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000840,1.31e-75,5;CL:0001029,1.31e-75,5;CL:0000990,1.50e-50,8;CL:0000451,2.00e-41,10;CL:0001014,1.30e-37,2;CL:0001016,1.30e-37,2;CL:0000453,1.05e-15,5;CL:0000738,5.74e-08,136;CL:0002009,1.91e-07,61;CL:0002031,5.28e-07,120;CL:0000557,8.70e-07,67 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001042!1.36e-13!10;UBERON:0009145!1.36e-13!10;UBERON:0006562!2.24e-12!11;UBERON:0004177!2.24e-11!7;UBERON:0002171!7.50e-10!1;UBERON:0006518!7.50e-10!1;UBERON:0008949!7.50e-10!1;UBERON:0000101!7.50e-10!1;UBERON:0002167!7.50e-10!1;UBERON:0002370!1.55e-09!4;UBERON:0005058!1.55e-09!4;UBERON:0009113!1.55e-09!4;UBERON:0003295!1.55e-09!4;UBERON:0005562!1.55e-09!4;UBERON:0002372!2.67e-09!1;UBERON:0001961!2.67e-09!1;UBERON:0001744!2.67e-09!1;UBERON:0001735!2.67e-09!1;UBERON:0001557!3.16e-07!19;UBERON:0002193!3.37e-07!112;UBERON:0002405!5.76e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.20e-37;2!UBERON:0005058;8.20e-37;2!UBERON:0009113;8.20e-37;2!UBERON:0002171;4.28e-19;1!UBERON:0006518;4.28e-19;1!UBERON:0008949;4.28e-19;1!UBERON:0000101;4.28e-19;1!UBERON:0002167;4.28e-19;1!UBERON:0004177;2.17e-15;5!UBERON:0005057;2.17e-15;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,3.91e-19,1;UBERON:0006518,3.91e-19,1;UBERON:0008949,3.91e-19,1;UBERON:0000101,3.91e-19,1;UBERON:0002167,3.91e-19,1;UBERON:0002370,5.64e-19,4;UBERON:0005058,5.64e-19,4;UBERON:0009113,5.64e-19,4;UBERON:0003295,5.64e-19,4;UBERON:0005562,5.64e-19,4;UBERON:0003351,5.42e-13,6;UBERON:0004177,2.83e-11,7;UBERON:0005057,2.83e-11,7;UBERON:0002405,3.61e-09,93;UBERON:0002390,1.10e-08,98;UBERON:0003061,1.10e-08,98;UBERON:0000974,3.63e-08,10;UBERON:0003408,3.63e-08,10;UBERON:0001042,3.63e-08,10;UBERON:0009145,3.63e-08,10;UBERON:0002193,7.50e-08,108;UBERON:0006562,1.67e-07,11;UBERON:0009722,1.67e-07,11;UBERON:0007690,1.67e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,52.9012251657134,47.3632885454007,55.3105115758479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84968792705877,0.318852545457645,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,199.326867914629,199.640904275951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.16711278688049,2.17261500035503,0,0,0,0.435433495793923,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CD1A | |||
}} |
Latest revision as of 20:09, 17 September 2015
Short description: | p5@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CD1A_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 327bp_to_ENST00000289429, NM_001763, uc001frt.2_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | P06126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
immature conventional dendritic cell | 1.31e-75 | 5 |
common dendritic progenitor | 1.31e-75 | 5 |
conventional dendritic cell | 1.50e-50 | 8 |
dendritic cell | 2.00e-41 | 10 |
CD1a-positive Langerhans cell | 1.30e-37 | 2 |
immature CD1a-positive Langerhans cell | 1.30e-37 | 2 |
Langerhans cell | 1.05e-15 | 5 |
leukocyte | 5.74e-08 | 136 |
macrophage dendritic cell progenitor | 1.91e-07 | 61 |
hematopoietic lineage restricted progenitor cell | 5.28e-07 | 120 |
granulocyte monocyte progenitor cell | 8.70e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 3.91e-19 | 1 |
right lung lobe | 3.91e-19 | 1 |
lower lobe of lung | 3.91e-19 | 1 |
lobe of lung | 3.91e-19 | 1 |
right lung | 3.91e-19 | 1 |
thymus | 5.64e-19 | 4 |
hemolymphoid system gland | 5.64e-19 | 4 |
thymic region | 5.64e-19 | 4 |
pharyngeal gland | 5.64e-19 | 4 |
thymus primordium | 5.64e-19 | 4 |
pharyngeal epithelium | 5.42e-13 | 6 |
hemopoietic organ | 2.83e-11 | 7 |
immune organ | 2.83e-11 | 7 |
immune system | 3.61e-09 | 93 |
hematopoietic system | 1.10e-08 | 98 |
blood island | 1.10e-08 | 98 |
neck | 3.63e-08 | 10 |
gland of gut | 3.63e-08 | 10 |
chordate pharynx | 3.63e-08 | 10 |
pharyngeal region of foregut | 3.63e-08 | 10 |
hemolymphoid system | 7.50e-08 | 108 |
pharynx | 1.67e-07 | 11 |
entire pharyngeal arch endoderm | 1.67e-07 | 11 |
early pharyngeal endoderm | 1.67e-07 | 11 |