FFCP PHASE1:Hg19::chr1:201368612..201368639,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:201368612..201368639,+ | |||
|description=CAGE_peak_at_chr1:201368612..201368639,+ | |||
|id=chr1:201368612..201368639,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.39e-26!254;CL:0000223!1.05e-23!59;CL:0002076!2.45e-22!43;CL:0002251!7.14e-12!21;CL:0002368!1.05e-09!13;CL:1000507!2.18e-07!12;CL:1000494!2.18e-07!12;CL:1000449!2.82e-07!16;CL:0000453!5.82e-07!5;CL:0002159!7.58e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;2.34e-15;42!CL:0000453;4.58e-12;5!CL:0002368;6.58e-10;13!CL:0002251;1.96e-09;20!CL:0002166;2.61e-08;3!CL:0002621;5.30e-08;3!CL:0002159;8.54e-08;14!CL:0002328;2.21e-07;3!CL:0002231;4.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.88e-21,58;CL:0000066,2.16e-18,253;CL:0002076,5.75e-18,42;CL:0000453,8.37e-12,5;CL:0002368,3.76e-10,13;CL:0002251,2.45e-09,20;CL:0002166,2.33e-08,3;CL:0002159,6.27e-08,14;CL:0002621,8.67e-08,3;CL:0002328,1.90e-07,3;CL:0002231,9.73e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.68e-13;13!CL:0000223;3.23e-13;58!UBERON:0004161;4.75e-10;11!UBERON:0003104;7.31e-07;31 | |||
|ontology_enrichment_disease=DOID:305!3.12e-13!106;DOID:0050687!3.85e-09!143;DOID:1749!5.40e-09!14;DOID:299!5.13e-07!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.69e-07,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.06e-26!169;UBERON:0000925!1.06e-26!169;UBERON:0006595!1.06e-26!169;UBERON:0001007!5.27e-21!155;UBERON:0001555!5.27e-21!155;UBERON:0007026!5.27e-21!155;UBERON:0004921!1.35e-18!129;UBERON:0004185!1.35e-18!129;UBERON:0000466!3.41e-18!126;UBERON:0000077!1.28e-16!130;UBERON:0005911!9.23e-16!82;UBERON:0005177!3.01e-14!107;UBERON:0000464!2.95e-13!104;UBERON:0000058!5.87e-11!26;UBERON:0001041!6.02e-11!98;UBERON:0006554!7.10e-10!44;UBERON:0003929!7.54e-10!54;UBERON:0005172!8.08e-10!55;UBERON:0005173!8.08e-10!55;UBERON:0001008!1.72e-09!45;UBERON:0001004!2.36e-09!72;UBERON:0009569!2.57e-09!113;UBERON:0000062!3.14e-09!511;UBERON:0000080!9.99e-09!18;UBERON:0002120!9.99e-09!18;UBERON:0004875!9.99e-09!18;UBERON:0005721!9.99e-09!18;UBERON:0005754!9.99e-09!18;UBERON:0007297!9.99e-09!18;UBERON:0003104!1.04e-08!238;UBERON:0009142!1.04e-08!238;UBERON:0002553!2.03e-08!70;UBERON:0002365!3.35e-08!31;UBERON:0002330!3.35e-08!31;UBERON:0003064!3.54e-08!37;UBERON:0009497!3.71e-08!25;UBERON:0000015!3.71e-08!25;UBERON:0002423!3.71e-08!25;UBERON:0006235!3.71e-08!25;UBERON:0004161!3.71e-08!25;UBERON:0002530!4.24e-08!59;UBERON:0002417!4.80e-08!61;UBERON:0000916!4.80e-08!61;UBERON:0006555!5.32e-08!17;UBERON:0005103!5.32e-08!17;UBERON:0000083!5.32e-08!17;UBERON:0009201!5.32e-08!17;UBERON:0004819!5.32e-08!17;UBERON:0006553!5.32e-08!17;UBERON:0003074!5.32e-08!17;UBERON:0003060!5.32e-08!17;UBERON:0000344!5.86e-08!12;UBERON:0005409!7.38e-08!35;UBERON:0000922!9.84e-08!612;UBERON:0005153!1.02e-07!37;UBERON:0000489!1.46e-07!32;UBERON:0004876!1.75e-07!20;UBERON:0009856!1.80e-07!26;UBERON:0009773!2.18e-07!12;UBERON:0001231!2.18e-07!12;UBERON:0004810!2.18e-07!12;UBERON:0004211!2.82e-07!16;UBERON:0001285!2.82e-07!16;UBERON:0007684!2.82e-07!16;UBERON:0003220!2.82e-07!16;UBERON:0004208!2.82e-07!16;UBERON:0000161!3.43e-07!35;UBERON:0000481!4.22e-07!347;UBERON:0003887!5.88e-07!21;UBERON:0000160!5.96e-07!27;UBERON:0005156!6.80e-07!59;UBERON:0000990!6.80e-07!59;UBERON:0003886!6.93e-07!63;UBERON:0007499!7.49e-07!25;UBERON:0002113!9.95e-07!27;UBERON:0003918!9.95e-07!27;UBERON:0005095!9.95e-07!27;UBERON:0007687!9.95e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.48e-15;22!UBERON:0000160;5.34e-14;17!UBERON:0002423;2.01e-13;25!UBERON:0003350;7.50e-10;8!UBERON:0004921;1.17e-09;33!UBERON:0000344;3.16e-09;20!UBERON:0002108;5.52e-09;4!UBERON:0001007;6.89e-09;81!UBERON:0002294;1.93e-08;7!UBERON:0001173;1.93e-08;7!UBERON:0003929;3.64e-08;7!UBERON:0001949;5.30e-08;3!UBERON:0001555;5.67e-08;54!UBERON:0000485;9.48e-08;7!UBERON:0004815;2.21e-07;3!UBERON:0002031;2.21e-07;3!UBERON:0002365;4.78e-07;31!UBERON:0002330;4.78e-07;31!UBERON:0002107;6.00e-07;19!UBERON:0006925;6.00e-07;19!UBERON:0000059;6.34e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-21,160;UBERON:0000925,1.27e-21,160;UBERON:0006595,1.27e-21,160;UBERON:0001007,5.21e-19,145;UBERON:0001555,5.21e-19,145;UBERON:0007026,5.21e-19,145;UBERON:0004921,1.23e-16,118;UBERON:0005911,1.57e-15,82;UBERON:0003929,6.19e-15,54;UBERON:0000160,2.04e-14,17;UBERON:0009497,1.99e-13,25;UBERON:0000015,1.99e-13,25;UBERON:0002423,1.99e-13,25;UBERON:0006235,1.99e-13,25;UBERON:0004161,1.99e-13,25;UBERON:0005409,3.17e-13,25;UBERON:0008835,6.40e-11,22;UBERON:0003894,6.40e-11,22;UBERON:0009854,2.46e-10,23;UBERON:0003350,1.03e-09,8;UBERON:0007499,2.62e-09,25;UBERON:0000344,5.27e-09,20;UBERON:0002108,5.30e-09,4;UBERON:0009856,7.43e-09,26;UBERON:0005177,1.24e-08,101;UBERON:0001949,8.67e-08,3;UBERON:0004815,1.90e-07,3;UBERON:0002031,1.90e-07,3;UBERON:0005172,2.35e-07,54;UBERON:0005173,2.35e-07,54;UBERON:0001041,2.87e-07,87;UBERON:0002365,3.10e-07,31;UBERON:0002330,3.10e-07,31;UBERON:0000059,3.58e-07,11;UBERON:0011216,3.95e-07,223;UBERON:0002107,5.91e-07,19;UBERON:0006925,5.91e-07,19;UBERON:0008836,5.91e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83884244895785,2.10844143144775,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,0,1.85392221392215,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.47869535693934,1.09098448236334,3.15485054927904,0.243947412259191,0.397589304964456,0.464775771478074,0.207322110030741,0.756962552626885,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,5.07020139287323,0,2.36315962672562,0,1.96781501668982,0,3.51200913307602,0,2.71428225511403,1.85176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62403003920662,2.35174979478403,2.55195175036296,0.716468181622786,2.03443756959773,2.30029607499127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,1.00253235151642,1.01289087829486,0,0,0,0.902399225814824,0.616122696835318,0.784349769176855,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.270946437543853,2.00675909541941,0.764628819135115,1.66215201785745,0.895499018888713,0,0,0,0,0,2.7821073144885,0,0,0.574265537996172,4.55042172225565,0,0,0,0,0,0,0,0,0,1.98341898433174,1.15314040419064,2.55225424989168,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,1.92444225451024,2.68120910214315,0,2.91845782408015,0.43050537267123,0,0.886860307073351,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49137296979728,0,0,0,0,0.71623345421307,0,0.614321404198464,0,0,0,0,8.86726714137573,0,0.828851746593443,0.503865495708552,0,0,0,1.52776196950456,1.25314822272926,0,0.0986434056369336,0,0,0.969332746095218,0,0,0.520855522170466,0,0,0.682760689712998,0.762760950878299,1.41832609060762,0,0,0,0,0,0,0,0,0,0,1.11538995422883,0.230850775511391,0,0.23056390438806,0.807818799687949,0.434589487688032,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,1.46909527343233,1.41353071433941,0,1.99052386215701,4.33442066066362,2.4441205797345,0,0,0,0,0,0,0,0.391329237864179,0,1.97292201424695,2.41981432097328,0,0,0,0,0,0,0,0,0.284609546029793,0,0.867798691675654,2.25382514053069,0.522355239482415,0.873633341210151,0,0,0,0,0.290967049465258,0,0.225980740780532,0,0,0,2.34661659281764,0.0801588202515337,4.90941887900511,0.19980960958213,3.60226042885265,0,0,0,0,1.17847017308398,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,0,2.20592910460226,1.483485450861,2.15691340333392,1.67326718575073,0,0,0,1.12527203925513,0.412618309791701,0.415440338029185,7.42413842119952,2.32140586367385,0.0607495566580247,1.67717343799633,4.4919253160543,1.62609223218494,0,0,0.191915197319445,0.714695326373367,0,0,0,0,0,0,0,0,0,5.12932817873289,3.97520666736664,0,0,0,0,0.320362237703084,0.943225830597996,0.414239055347196,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0.758245587708239,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,1.16916185303633,3.05589132720735,1.30852315404675,0,0,1.05656061679314,0,0,0,0,0,1.81843360035278,3.11038630016486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.707818340086442,0.917142992608395,1.38630799380406,0,0,0,0.150420656698515,0,3.12605604493237,0,0,3.84425824164318,0,0,0,0,0,0,0,0,0.383287282918786,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0.236387681767936,1.22354542081276,0,0,1.96190514319652,1.82631744101899,0,0,0,0,0,0,0,0.207216164163037,0,0.691259661814092,0.430227358820278,0,0,0.846774100381858,0.9164274741762,0,0,1.90154234056247,0.392600934460972,11.3383670233511,0,0,0,0,0.233939463462106,1.19370465096821,0,0.22589216407792,0,1.50962843566674,8.79785402430569,8.52382285965433,0,0.980593287015622,0.235676547101626,0,0,0.8453114551668,0,0,0,0,0.71421575442263,0,0.240724100067505,3.65168194123259,0.458729283404541,0.143339583151451,0,0,0,6.34832208618481,0,0,0,0,0,0,0.407955318967927,0,0.36757959813938,0.50141507858475,0.151557396436479,0.535928260312357,0,0,0.213233981900981,0,0.322944549180031,0.31037357147929,0,0.25458863311266,0,0,0.342233301085281,0.202056159043763,0.430333232356058,0,1.13964576055364,0,0,0.449126010532934,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p@chr1:201368612..201368639,+ | |||
}} |
Latest revision as of 02:08, 28 July 2015
Short description: | p@chr1:201368612..201368639, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:201368612..201368639, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.88e-21 | 58 |
epithelial cell | 2.16e-18 | 253 |
endo-epithelial cell | 5.75e-18 | 42 |
Langerhans cell | 8.37e-12 | 5 |
respiratory epithelial cell | 3.76e-10 | 13 |
epithelial cell of alimentary canal | 2.45e-09 | 20 |
epithelial cell of Malassez | 2.33e-08 | 3 |
general ecto-epithelial cell | 6.27e-08 | 14 |
gingival epithelial cell | 8.67e-08 | 3 |
bronchial epithelial cell | 1.90e-07 | 3 |
epithelial cell of prostate | 9.73e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.69e-07 | 106 |