FFCP PHASE1:Hg19::chr1:202927388..202927448,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24040 | |||
|TSSclassifier=strong | |||
|UniProt=F8W782,C9J0W7 | |||
|association_with_transcript=0bp_to_ENST00000367254,ENST00000426229_5end | |||
|cluster_id=chr1:202927388..202927448,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_1_at_ADIPOR1_5end | |||
|id=chr1:202927388..202927448,- | |||
|ontology_enrichment_celltype=CL:0000766!3.50e-16!76;CL:0002194!9.04e-15!63;CL:0000576!9.04e-15!63;CL:0000040!9.04e-15!63;CL:0000559!9.04e-15!63;CL:0000839!6.78e-14!70;CL:0002009!1.01e-13!65;CL:0000066!2.29e-12!254;CL:0000557!2.33e-11!71;CL:0000860!5.29e-10!45;CL:0002057!1.13e-09!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.66e-10;39!CL:0000234;1.66e-10;39!CL:0000860;1.95e-09;33!CL:0002057;1.95e-09;33!CL:0000576;8.02e-08;48!CL:0000766;8.73e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.89e-15,72;CL:0002194,4.62e-14,59;CL:0000576,4.62e-14,59;CL:0000040,4.62e-14,59;CL:0000559,4.62e-14,59;CL:0000839,3.56e-13,66;CL:0002009,5.22e-13,61;CL:0000066,8.89e-13,253;CL:0000473,1.83e-12,48;CL:0000234,1.83e-12,48;CL:0000557,1.18e-10,67;CL:0000860,1.13e-09,42;CL:0002057,1.13e-09,42 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.90e-18!216;UBERON:0000926!1.33e-16!448;UBERON:0004120!1.33e-16!448;UBERON:0006603!1.33e-16!448;UBERON:0002193!3.50e-14!112;UBERON:0002390!8.69e-14!102;UBERON:0003061!8.69e-14!102;UBERON:0002405!3.07e-11!115;UBERON:0002371!1.25e-10!80;UBERON:0000480!3.24e-10!626;UBERON:0000468!3.68e-10!659;UBERON:0000467!7.15e-10!625;UBERON:0001474!2.12e-09!86;UBERON:0000923!1.15e-08!604;UBERON:0005291!1.15e-08!604;UBERON:0006598!1.15e-08!604;UBERON:0002532!1.15e-08!604;UBERON:0002050!1.95e-08!605;UBERON:0005423!1.95e-08!605;UBERON:0000922!5.59e-08!612;UBERON:0004765!4.01e-07!101;UBERON:0001434!4.01e-07!101;UBERON:0009569!6.09e-07!113 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.27e-17,203;UBERON:0002193,1.87e-13,108;UBERON:0002390,4.62e-13,98;UBERON:0003061,4.62e-13,98;UBERON:0002371,6.14e-10,76;UBERON:0000926,7.46e-10,315;UBERON:0004120,7.46e-10,315;UBERON:0006603,7.46e-10,315;UBERON:0002405,2.06e-09,93;UBERON:0001474,9.74e-09,82;UBERON:0005423,1.38e-08,581;UBERON:0002050,3.61e-08,564;UBERON:0000922,5.34e-08,592;UBERON:0000923,7.25e-08,560;UBERON:0010316,7.25e-08,560;UBERON:0005291,7.25e-08,560;UBERON:0006598,7.25e-08,560;UBERON:0010317,7.25e-08,560;UBERON:0002532,7.25e-08,560;UBERON:0004765,2.58e-07,90;UBERON:0001041,2.95e-07,87;UBERON:0009569,5.19e-07,112 | |||
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| |||
|short_description=p1@ADIPOR1 | |||
}} |
Latest revision as of 21:15, 19 September 2015
Short description: | p1@ADIPOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ADIPOR1_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000367254, ENST00000426229_5end |
EntrezGene: | ADIPOR1 |
HGNC: | 24040 |
UniProt: | F8W782C9J0W7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.89e-15 | 72 |
monopoietic cell | 4.62e-14 | 59 |
monocyte | 4.62e-14 | 59 |
monoblast | 4.62e-14 | 59 |
promonocyte | 4.62e-14 | 59 |
myeloid lineage restricted progenitor cell | 3.56e-13 | 66 |
macrophage dendritic cell progenitor | 5.22e-13 | 61 |
epithelial cell | 8.89e-13 | 253 |
defensive cell | 1.83e-12 | 48 |
phagocyte | 1.83e-12 | 48 |
granulocyte monocyte progenitor cell | 1.18e-10 | 67 |
classical monocyte | 1.13e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.13e-09 | 42 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.27e-17 | 203 |
hemolymphoid system | 1.87e-13 | 108 |
hematopoietic system | 4.62e-13 | 98 |
blood island | 4.62e-13 | 98 |
bone marrow | 6.14e-10 | 76 |
mesoderm | 7.46e-10 | 315 |
mesoderm-derived structure | 7.46e-10 | 315 |
presumptive mesoderm | 7.46e-10 | 315 |
immune system | 2.06e-09 | 93 |
bone element | 9.74e-09 | 82 |
developing anatomical structure | 1.38e-08 | 581 |
embryonic structure | 3.61e-08 | 564 |
embryo | 5.34e-08 | 592 |
germ layer | 7.25e-08 | 560 |
germ layer / neural crest | 7.25e-08 | 560 |
embryonic tissue | 7.25e-08 | 560 |
presumptive structure | 7.25e-08 | 560 |
germ layer / neural crest derived structure | 7.25e-08 | 560 |
epiblast (generic) | 7.25e-08 | 560 |
skeletal element | 2.58e-07 | 90 |
foregut | 2.95e-07 | 87 |
subdivision of trunk | 5.19e-07 | 112 |