FFCP PHASE1:Hg19::chr1:225840783..225840860,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55740 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18271 | |||
|TSSclassifier=strong | |||
|UniProt=Q8N8S7 | |||
|association_with_transcript=0bp_to_ENST00000366844,NM_001008493,NM_018212,uc001hpc.1,uc001hpd.1_5end | |||
|cluster_id=chr1:225840783..225840860,- | |||
|description=CAGE_peak_1_at_ENAH_5end | |||
|id=chr1:225840783..225840860,- | |||
|ontology_enrichment_celltype=CL:0000055!5.59e-25!180;CL:0002321!2.38e-12!248;CL:0000220!7.01e-12!246;CL:0000133!1.59e-10!59;CL:0002319!4.83e-10!25;CL:0000057!5.40e-10!75;CL:0000221!7.92e-10!71;CL:0000095!1.30e-07!17;CL:0000123!1.30e-07!17;CL:0000243!8.99e-07!15;CL:0000125!8.99e-07!15;CL:0000030!8.99e-07!15;CL:0000339!8.99e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.41e-10;25!CL:0000095;1.19e-07;17!CL:0000243;8.27e-07;15!CL:0000125;8.27e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.97e-12,250;CL:0000133,1.50e-10,59;CL:0000057,1.82e-10,76;CL:0002319,4.56e-10,25;CL:0000221,1.53e-09,72;CL:0000095,1.25e-07,17;CL:0000123,1.25e-07,17;CL:0000243,8.68e-07,15;CL:0000125,8.68e-07,15;CL:0000030,8.68e-07,15;CL:0000339,8.68e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000339;8.27e-07;15 | |||
|ontology_enrichment_disease=DOID:0050687!1.46e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,1.55e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0000475!1.38e-19!365;UBERON:0000468!3.72e-15!659;UBERON:0000481!8.05e-15!347;UBERON:0000922!7.64e-11!612;UBERON:0002100!4.01e-10!216;UBERON:0000467!6.69e-10!625;UBERON:0002050!7.81e-10!605;UBERON:0005423!7.81e-10!605;UBERON:0000480!9.59e-10!626;UBERON:0000923!1.14e-09!604;UBERON:0005291!1.14e-09!604;UBERON:0006598!1.14e-09!604;UBERON:0002532!1.14e-09!604;UBERON:0000924!1.39e-09!173;UBERON:0006601!1.39e-09!173;UBERON:0004121!4.16e-09!169;UBERON:0000477!4.93e-09!286;UBERON:0000483!7.44e-09!309;UBERON:0000119!8.79e-09!312;UBERON:0003104!1.21e-08!238;UBERON:0009142!1.21e-08!238;UBERON:0005256!1.95e-08!143;UBERON:0000914!3.01e-07!83;UBERON:0002329!3.01e-07!83;UBERON:0003077!3.01e-07!83;UBERON:0003059!3.01e-07!83;UBERON:0007282!3.01e-07!83;UBERON:0009618!3.01e-07!83;UBERON:0007285!3.01e-07!83;UBERON:0004111!7.38e-07!241 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,1.28e-11,223;UBERON:0003104,1.90e-09,160;UBERON:0009142,1.90e-09,160;UBERON:0004121,2.64e-09,171;UBERON:0000924,2.64e-09,171;UBERON:0006601,2.64e-09,171;UBERON:0000483,2.03e-08,306;UBERON:0000119,2.39e-08,309;UBERON:0000922,3.48e-08,592;UBERON:0002100,4.17e-08,199;UBERON:0005423,1.83e-07,581;UBERON:0005256,2.12e-07,122;UBERON:0002050,3.66e-07,564;UBERON:0001016,5.21e-07,89;UBERON:0004111,6.21e-07,240;UBERON:0002385,9.23e-07,64;UBERON:0001015,9.23e-07,64;UBERON:0000383,9.23e-07,64 | |||
|phase1_expression=147.341165588421,129.530816954045,96.2718579975483,126.092355924944,66.1502419752386,71.5317589762302,91.1879561405918,34.1128731650489,30.0363472429814,29.4880723801811,7.6758128476967,22.9363440736681,25.0578629317031,167.579641907903,167.687072118325,52.4413614232385,67.5017871386854,62.8066677733141,75.6295838125286,73.9957559041495,51.2041735023075,87.1404125709084,99.0376515473456,100.192079153351,128.430120305483,0.0764134057479513,0.0821005894499457,0,0,0,3.2511385896376,26.6632155098889,27.4097386088208,24.0340106608412,30.2122082263176,8.38798471675787,2.34880351467878,0,0.601633342410425,0,0.223915474239924,0.32389366601898,0.515151135268373,0,0,0.242584061187816,0,0.411167888021826,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,9.6863920421339,0.368277635987565,0,0,0,0,0,0,0.32145117339416,0.285012743741249,0,0,3.51992488922645,2.73069305631066,5.33705552318133,4.69403244823158,2.40237592221607,5.74752439954483,3.30522436392431,3.81621501814146,5.69212969109448,1.76171156811282,3.44045905312706,1.32171328579026,0.560508562981536,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,185.293218398611,44.9369576001436,52.0400626703168,131.563851467982,257.687686066847,223.643025275512,59.6464460288324,49.6367567708689,106.44620412674,163.192836532447,116.381091043392,36.019245761871,9.83597278389864,15.9437310397305,0.324547393654683,0.696518949197069,0.398873881556595,0.476981248610684,0,0,19.6774783293038,18.9251610923347,20.1341490932405,31.6572447477445,27.6869627898538,37.6911717457892,20.6905016871442,17.8307563826837,24.9036383880697,20.4179573786449,12.4877088303836,13.6848979029332,11.9590408198603,33.0896772311282,24.3042584364528,46.971657077426,46.4775801336172,43.8058659080123,18.397996495906,20.8838445104988,24.5490336866746,0,0,27.0378312328371,75.5397366576884,82.6897241169706,87.2576501559112,76.8722143606821,82.6377330522172,85.2229952216307,145.178634192399,109.520391497219,110.479917566917,81.634667274231,95.4617514182599,47.5262322805085,62.2269998438399,43.1151434574186,13.4228833037038,13.6913237170668,26.1535190965652,30.7678386446664,35.9357936497252,27.107005693534,50.6302344712135,25.918040952783,82.9706022841397,73.6561771514873,93.714166196573,57.3401658020957,26.5888712472008,30.468836625686,52.8000153859689,56.2440154432891,116.768047154303,151.711458920515,102.011641997579,59.438463975851,83.0574013239431,64.9214462008445,108.932997196015,83.7254158075482,70.7970875868075,72.3969917528218,69.421587411683,89.1139034233886,122.77062650311,104.760016311308,77.1378150622468,60.6172713070545,79.8771583162382,76.9746030459172,89.5279927399375,63.0030381312348,78.5508827301604,49.6171950022977,81.2344882823105,109.602118401868,82.265311551619,75.9835533262665,77.9671429205692,90.5143850508058,39.112383082454,64.9673347574814,17.9575397758225,43.650585235006,21.6563844500876,51.4634580173321,61.5334118785071,69.4111766064428,56.3602200662533,59.4810882372269,61.6903609688851,45.4381508499754,47.2893730952084,51.9408661877627,16.2394200017423,33.658025712827,34.1606429405062,41.1624391879517,12.6755034821831,15.725235466842,15.9513274803979,0.441463099414651,34.4367627920718,59.5340301735884,77.0447003568551,23.6043681841001,27.4444094683752,38.1464394053142,50.5002873231003,20.7986957055916,83.7121783746585,59.1245065372892,118.465372483944,17.612706626851,23.6122611414071,25.8745647039054,12.6432703673484,12.8772924314231,0.246217006087397,0.936017060556951,0.743155811443641,62.8016687711406,116.243632713611,88.6094357764915,49.4363045319723,36.3292423142452,19.5525166374258,5.41929561685538,6.33948724895227,17.6228898209656,15.7090749224488,21.587456115911,26.7961113912953,11.8416411923066,19.926966025708,32.503764744314,23.5474958290611,19.5222987598546,17.1495859578347,36.2183402435515,37.4925659196621,46.4231349246614,111.432218983204,32.1890801266694,28.740293586904,144.138459189,85.2860982673202,53.4991338465256,31.2068090451212,43.1603930006081,91.3629379475563,24.9605938480064,40.3387765022577,33.225090797961,71.0783897485092,21.3827005692026,116.054160167941,108.941682325037,109.970290300263,0,0,0,250.887223699687,160.806710167759,55.6283929658802,108.87554261402,176.504161070779,159.543318246747,0,0,0,0.128343036279748,349.888297554332,222.539150096533,96.6611015972119,84.2606814631774,65.0697526686227,0,0,0,165.142747853962,167.056954033932,96.2990834134061,162.21727199403,132.0374517099,122.534776481367,139.046859596351,107.437757602796,113.703752027992,45.5281513687022,140.815826889513,102.324888540645,26.4126187982972,15.4682914395565,19.9023185810296,0.413536052245775,0.215714200818617,0,5.15316871458641,13.3148351608398,17.2362467197918,115.61823844355,156.531212753824,137.523446272206,81.2402206281144,97.7360845717404,133.187046706907,59.3672265779964,52.4312958929029,68.8939494214933,60.8562226062326,49.329170772444,60.3131864207188,39.1584616676856,127.522115112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| |||
|short_description=p1@ENAH | |||
}} |
Latest revision as of 00:21, 16 September 2015
Short description: | p1@ENAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENAH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000366844, NM_001008493, NM_018212, uc001hpc.1, uc001hpd.1_5end |
EntrezGene: | ENAH |
HGNC: | 18271 |
UniProt: | Q8N8S7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.97e-12 | 250 |
neurectodermal cell | 1.50e-10 | 59 |
fibroblast | 1.82e-10 | 76 |
neural cell | 4.56e-10 | 25 |
ectodermal cell | 1.53e-09 | 72 |
neuron associated cell | 1.25e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.25e-07 | 17 |
glial cell (sensu Vertebrata) | 8.68e-07 | 15 |
glial cell | 8.68e-07 | 15 |
glioblast | 8.68e-07 | 15 |
glioblast (sensu Vertebrata) | 8.68e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 1.28e-11 | 223 |
mesenchyme | 1.90e-09 | 160 |
entire embryonic mesenchyme | 1.90e-09 | 160 |
ectoderm-derived structure | 2.64e-09 | 171 |
ectoderm | 2.64e-09 | 171 |
presumptive ectoderm | 2.64e-09 | 171 |
epithelium | 2.03e-08 | 306 |
cell layer | 2.39e-08 | 309 |
embryo | 3.48e-08 | 592 |
trunk | 4.17e-08 | 199 |
developing anatomical structure | 1.83e-07 | 581 |
trunk mesenchyme | 2.12e-07 | 122 |
embryonic structure | 3.66e-07 | 564 |
nervous system | 5.21e-07 | 89 |
anatomical conduit | 6.21e-07 | 240 |
muscle tissue | 9.23e-07 | 64 |
musculature | 9.23e-07 | 64 |
musculature of body | 9.23e-07 | 64 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 1.55e-09 | 143 |