FFCP PHASE1:Hg19::chr1:247289721..247289729,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:247289721..247289729,+ | |||
|coexpression_cluster_id=C364 | |||
|description=CAGE_peak_at_chr1:247289721..247289729,+ | |||
|id=chr1:247289721..247289729,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.25e-43!42;CL:0000860!1.16e-39!45;CL:0000557!6.41e-33!71;CL:0000839!3.20e-31!70;CL:0000763!7.27e-31!112;CL:0000049!7.27e-31!112;CL:0000766!8.69e-31!76;CL:0002009!8.96e-29!65;CL:0002194!1.03e-26!63;CL:0000576!1.03e-26!63;CL:0000040!1.03e-26!63;CL:0000559!1.03e-26!63;CL:0000738!1.07e-25!140;CL:0000037!1.26e-25!172;CL:0000566!1.26e-25!172;CL:0002032!8.72e-25!165;CL:0000837!8.72e-25!165;CL:0000988!1.10e-23!182;CL:0002031!1.37e-23!124;CL:0002087!3.69e-17!119;CL:0000134!7.64e-09!358;CL:0002320!3.30e-08!365;CL:0000219!1.13e-07!390;CL:0000048!1.19e-07!430;CL:0000034!2.30e-07!444;CL:0000723!3.48e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-53;33!CL:0002057;1.41e-53;33!CL:0000473;8.06e-43;39!CL:0000234;8.06e-43;39!CL:0000576;2.23e-33;48!CL:0000766;1.45e-26;69!CL:0000763;1.67e-15;100!CL:0002087;1.45e-10;104!CL:0000738;1.64e-09;136!CL:0000875;5.22e-07;3!CL:0002396;5.22e-07;3!CL:0000453;8.24e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.38e-65,42;CL:0002057,4.38e-65,42;CL:0000473,2.84e-62,48;CL:0000234,2.84e-62,48;CL:0000557,1.63e-57,67;CL:0000766,2.21e-54,72;CL:0002009,1.37e-50,61;CL:0000839,1.95e-50,66;CL:0000763,4.85e-50,108;CL:0000049,4.85e-50,108;CL:0002194,3.59e-47,59;CL:0000576,3.59e-47,59;CL:0000040,3.59e-47,59;CL:0000559,3.59e-47,59;CL:0000738,9.79e-42,136;CL:0000037,1.86e-40,168;CL:0000988,1.03e-38,177;CL:0002032,1.22e-38,161;CL:0000837,1.22e-38,161;CL:0002031,7.10e-36,120;CL:0002087,1.95e-28,115;CL:0000134,8.73e-12,354;CL:0002320,3.30e-11,361;CL:0000034,9.03e-10,441;CL:0000219,1.05e-09,386;CL:0000048,1.27e-09,427;CL:0000723,3.14e-09,433;CL:0002393,3.41e-08,9;CL:0002397,3.41e-08,9;CL:0000875,4.32e-07,3;CL:0002396,4.32e-07,3;CL:0000453,7.96e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.44e-46;42!CL:0000049;4.91e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.25e-28!80;UBERON:0001474!1.99e-26!86;UBERON:0002390!2.63e-22!102;UBERON:0003061!2.63e-22!102;UBERON:0004765!7.39e-22!101;UBERON:0001434!7.39e-22!101;UBERON:0002193!1.52e-20!112;UBERON:0002405!1.55e-19!115;UBERON:0002204!1.77e-11!167;UBERON:0001737!2.09e-08!9;UBERON:0002384!1.12e-07!375;UBERON:0003081!3.05e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.15e-51,76;UBERON:0001474,2.02e-46,82;UBERON:0004765,5.20e-41,90;UBERON:0002405,5.86e-41,93;UBERON:0002390,4.04e-38,98;UBERON:0003061,4.04e-38,98;UBERON:0001434,1.81e-35,100;UBERON:0002193,3.08e-33,108;UBERON:0002204,2.16e-17,167;UBERON:0003081,2.79e-13,203;UBERON:0002384,2.01e-10,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,1.18009283054671,1.53531759238885,2.16742572642506,0,0,0,0,0,1.46800219667424,0,0,0,0,0,0,2.32637182047304,4.53451132426571,2.91100873425379,1.85943229524548,1.6446715520873,4.95530193432166,3.16461631554365,5.12321413058201,6.62150243688039,4.13694816883942,2.5819387343353,5.41705946377367,2.82363509313907,0.818718450173537,2.24723484445085,1.83650335422542,5.1348644332175,4.47535988059329,5.93732340336089,4.58766412529753,7.2458207590558,2.61188314765726,5.6738522469114,2.4912889959823,5.52747063564835,6.77927793946262,7.16723187526885,2.42159801053347,3.68277635987565,6.32924774881769,3.38008458099107,4.03948169933583,5.66078342872615,4.26848798356681,5.55654503513573,7.39337698806569,2.56511469367124,3.9783335439818,4.93193215164512,1.75996244461323,0.546138611262131,0,1.28019066769952,0,0,0,0,0,0.587237189370939,0,0,0,3.16060901730092,0,0,0,4.51403537554831,2.60737813306872,1.4203434172042,3.89653456815823,1.55974639639243,4.12448270464772,3.1014745241707,1.89562704635511,1.0247305578054,1.43065282315866,0.328875809207352,2.21080014228679,1.44901542867526,1.77943875794473,3.21048993707656,5.22677619024884,1.81294948316106,1.14966148080576,0.68725489096526,3.54227568827304,0,0.651083453856419,0,1.95747654801105,1.02389288923535,0,0.236777252044017,1.64225599384209,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85997455390064,1.11437250398869,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.926864265692532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843881661206331,0,0,0,0.80823028409406,0,0,0,0,0,0,0,0,0,0,1.51392510525377,2.18986415445498,0,0,0,0,0,1.41968160047813,0.842923450390509,1.20505514941741,0.661763836394364,0.435758888184812,2.13543557199987,0.134831308160164,1.37355025587742,0.38474715694639,0,0,0,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,0.811512834825538,0.469634776943287,0,0.462985512576611,0.951270761172991,0,0,0,0,0,0,0.839910640994298,0.425325291727159,0,0,0,0,1.58487181223807,2.69526550203004,2.59415916150531,2.65109110195398,0.825472625798197,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,7.03159928004977,0,0,1.14861935834114,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,0,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,0.261435451024901,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,1.78657797492418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430234056612155,0.785992328104969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,1.1490322207942,0,5.843194924942,0,0,0,5.01268954180134,3.72441911163527,0,0,0,0,0,0,0,0,0,0,3.2454681417118,0.33307196799782,0,0,0,0,0,0,0.23874448473769,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0.638002319463839,0.732780747214898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,1.44677833618517,1.65047323916681,2.07720169014593,2.4747128070665,6.1904156364636,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.13223260174269,0,0,0,0,0,0,0,0,0,0.544017803369474,0.5013797880454,0.306345576763462,0,0,0.886068179966986,0.366078794705889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0.414706207840855,0,0,0,1.52322084867518,0,0,0,0.464033759878494,0.398095888698616,0,1.03018711554838,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,1.59437808376036,3.43487327937273,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,2.85538840518309,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0.606965604236632,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0.955538938977433,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.392616934229891,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:247289721..247289729,+ | |||
}} |
Latest revision as of 06:08, 28 July 2015
Short description: | p@chr1:247289721..247289729, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:247289721..247289729, + |
Coexpression cluster: | C364_CD14_immature_CD14CD16_Aortic_CD4_Reticulocytes_Basophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.15e-51 | 76 |
bone element | 2.02e-46 | 82 |
skeletal element | 5.20e-41 | 90 |
immune system | 5.86e-41 | 93 |
hematopoietic system | 4.04e-38 | 98 |
blood island | 4.04e-38 | 98 |
skeletal system | 1.81e-35 | 100 |
hemolymphoid system | 3.08e-33 | 108 |
musculoskeletal system | 2.16e-17 | 167 |
lateral plate mesoderm | 2.79e-13 | 203 |
connective tissue | 2.01e-10 | 371 |