FFCP PHASE1:Hg19::chr1:95332264..95332266,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:95332264..95332266,+ | |||
|coexpression_cluster_id=C372 | |||
|description=CAGE_peak_at_chr1:95332264..95332266,+ | |||
|id=chr1:95332264..95332266,+ | |||
|ontology_enrichment_celltype=CL:0000128!2.73e-19!7;CL:0000126!2.73e-19!7;CL:0000127!2.73e-19!7;CL:0002453!2.73e-19!7;CL:0002603!7.50e-17!3;CL:0002605!2.84e-08!3;CL:0000243!8.24e-08!15;CL:0000125!8.24e-08!15;CL:0000030!8.24e-08!15;CL:0000339!8.24e-08!15;CL:0000064!8.33e-08!3;CL:0005012!8.33e-08!3;CL:0000067!8.33e-08!3;CL:0002304!8.33e-08!3;CL:0000095!5.83e-07!17;CL:0000123!5.83e-07!17;CL:0002319!9.79e-07!25 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.27e-34;3!UBERON:0003057;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-41!57;UBERON:0005068!1.27e-41!57;UBERON:0006241!1.27e-41!57;UBERON:0007135!1.27e-41!57;UBERON:0002616!5.41e-36!59;UBERON:0003076!1.51e-35!15;UBERON:0003057!1.51e-35!15;UBERON:0001017!6.49e-33!82;UBERON:0003075!2.03e-31!86;UBERON:0007284!2.03e-31!86;UBERON:0005743!3.51e-31!86;UBERON:0002346!8.27e-30!90;UBERON:0000955!1.07e-29!69;UBERON:0006238!1.07e-29!69;UBERON:0004733!2.15e-28!12;UBERON:0002028!2.15e-28!12;UBERON:0007277!2.15e-28!12;UBERON:0000073!8.37e-28!94;UBERON:0001016!8.37e-28!94;UBERON:0004732!4.05e-26!13;UBERON:0002298!1.28e-24!8;UBERON:0000033!3.12e-18!123;UBERON:0001896!5.22e-18!3;UBERON:0005290!5.22e-18!3;UBERON:0010096!5.22e-18!3;UBERON:0000153!3.62e-17!129;UBERON:0007811!3.62e-17!129;UBERON:0006331!8.83e-17!3;UBERON:0002780!1.38e-16!41;UBERON:0001890!1.38e-16!41;UBERON:0006240!1.38e-16!41;UBERON:0004121!3.45e-16!169;UBERON:0003080!3.82e-16!42;UBERON:0000924!1.08e-15!173;UBERON:0006601!1.08e-15!173;UBERON:0002680!6.72e-15!9;UBERON:0001895!6.72e-15!9;UBERON:0010092!6.72e-15!9;UBERON:0003056!2.31e-14!61;UBERON:0002020!8.17e-14!34;UBERON:0003528!8.17e-14!34;UBERON:0007023!3.21e-13!115;UBERON:0001897!1.71e-12!2;UBERON:0002148!7.28e-12!2;UBERON:0009662!7.28e-12!2;UBERON:0002791!1.26e-11!33;UBERON:0001893!2.99e-11!34;UBERON:0000956!1.56e-09!25;UBERON:0000203!1.56e-09!25;UBERON:0000025!5.23e-09!194;UBERON:0002240!8.35e-09!3;UBERON:0002037!1.12e-08!6;UBERON:0006215!1.12e-08!6;UBERON:0000988!3.41e-08!3;UBERON:0000119!5.87e-08!312;UBERON:0001894!7.93e-08!7;UBERON:0006222!7.93e-08!7;UBERON:0001778!8.33e-08!3;UBERON:0001775!8.33e-08!3;UBERON:0001869!2.55e-07!32;UBERON:0000483!2.86e-07!309;UBERON:0002702!3.52e-07!1;UBERON:0002336!4.18e-07!1;UBERON:0001018!4.18e-07!1;UBERON:0002473!4.18e-07!1;UBERON:0005340!4.18e-07!1;UBERON:0002316!4.18e-07!1;UBERON:0003544!4.18e-07!1;UBERON:0001020!4.18e-07!1;UBERON:0005970!4.18e-07!1;UBERON:0002437!4.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;4.27e-34;3!UBERON:0005174;4.27e-34;3!UBERON:0001137;4.27e-34;3!UBERON:0001896;5.96e-34;3!UBERON:0005290;5.96e-34;3!UBERON:0002298;9.07e-18;6!UBERON:0004733;1.33e-09;12!UBERON:0002028;1.33e-09;12!UBERON:0004732;5.70e-09;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,4.27e-34,3;UBERON:0005174,4.27e-34,3;UBERON:0001137,4.27e-34,3;UBERON:0001896,5.96e-34,3;UBERON:0005290,5.96e-34,3;UBERON:0010096,5.96e-34,3;UBERON:0003076,1.82e-27,15;UBERON:0003057,1.82e-27,15;UBERON:0002298,9.07e-18,6;UBERON:0004733,1.33e-09,12;UBERON:0002028,1.33e-09,12;UBERON:0007277,1.33e-09,12;UBERON:0004732,5.70e-09,13;UBERON:0001049,3.28e-08,56;UBERON:0005068,3.28e-08,56;UBERON:0006241,3.28e-08,56;UBERON:0007135,3.28e-08,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.204000691244253,0.313454721478088,0.572471974262113,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0.184369168541703,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.67401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.250381861413,1.14681839138014,0.776503360757966,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,3.86160320425212,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:95332264..95332266,+ | |||
}} |
Latest revision as of 11:34, 28 July 2015
Short description: | p@chr1:95332264..95332266, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:95332264..95332266, + |
Coexpression cluster: | C372_spinal_medulla_substantia_locus_thalamus_corpus_globus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spinal cord | 4.27e-34 | 3 |
dorsal region element | 4.27e-34 | 3 |
dorsum | 4.27e-34 | 3 |
medulla oblongata | 5.96e-34 | 3 |
myelencephalon | 5.96e-34 | 3 |
future myelencephalon | 5.96e-34 | 3 |
posterior neural tube | 1.82e-27 | 15 |
chordal neural plate | 1.82e-27 | 15 |
brainstem | 9.07e-18 | 6 |
segmental subdivision of hindbrain | 1.33e-09 | 12 |
hindbrain | 1.33e-09 | 12 |
presumptive hindbrain | 1.33e-09 | 12 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
neural tube | 3.28e-08 | 56 |
neural rod | 3.28e-08 | 56 |
future spinal cord | 3.28e-08 | 56 |
neural keel | 3.28e-08 | 56 |