FFCP PHASE1:Hg19::chr20:33464407..33464423,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55902 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15814 | |||
|TSSclassifier=strong | |||
|UniProt=Q5QPH3 | |||
|association_with_transcript=0bp_to_ENST00000253382,ENST00000467019_5end | |||
|cluster_id=chr20:33464407..33464423,+ | |||
|coexpression_cluster_id=C2185 | |||
|description=CAGE_peak_1_at_ACSS2_5end | |||
|id=chr20:33464407..33464423,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.75e-08!42;CL:0000860!2.29e-08!45;CL:0002009!5.90e-07!65;CL:0002194!6.60e-07!63;CL:0000576!6.60e-07!63;CL:0000040!6.60e-07!63;CL:0000559!6.60e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.28e-07;33!CL:0002057;1.28e-07;33!CL:0000136;2.43e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.74e-08,42;CL:0002057,1.74e-08,42;CL:0000473,5.87e-08,48;CL:0000234,5.87e-08,48;CL:0002009,3.42e-07,61;CL:0002194,3.75e-07,59;CL:0000576,3.75e-07,59;CL:0000040,3.75e-07,59;CL:0000559,3.75e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000923!5.99e-22!604;UBERON:0005291!5.99e-22!604;UBERON:0006598!5.99e-22!604;UBERON:0002532!5.99e-22!604;UBERON:0002050!5.99e-22!605;UBERON:0005423!5.99e-22!605;UBERON:0000922!1.04e-20!612;UBERON:0000480!1.74e-20!626;UBERON:0000467!1.83e-20!625;UBERON:0000062!3.76e-20!511;UBERON:0000468!3.97e-19!659;UBERON:0000926!3.12e-15!448;UBERON:0004120!3.12e-15!448;UBERON:0006603!3.12e-15!448;UBERON:0000481!7.23e-12!347;UBERON:0004119!1.25e-11!169;UBERON:0000925!1.25e-11!169;UBERON:0006595!1.25e-11!169;UBERON:0003104!1.16e-10!238;UBERON:0009142!1.16e-10!238;UBERON:0001007!3.84e-10!155;UBERON:0001555!3.84e-10!155;UBERON:0007026!3.84e-10!155;UBERON:0002100!5.02e-09!216;UBERON:0000483!8.03e-09!309;UBERON:0004921!1.53e-08!129;UBERON:0004185!1.53e-08!129;UBERON:0000119!1.96e-08!312;UBERON:0005177!2.55e-08!107;UBERON:0005256!1.05e-07!143;UBERON:0002405!2.70e-07!115;UBERON:0000077!3.02e-07!130;UBERON:0000477!3.03e-07!286;UBERON:0000475!3.74e-07!365;UBERON:0009569!4.03e-07!113;UBERON:0002204!7.29e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,1.47e-19,592;UBERON:0005423,1.53e-19,581;UBERON:0002050,5.00e-17,564;UBERON:0000923,1.22e-16,560;UBERON:0010316,1.22e-16,560;UBERON:0005291,1.22e-16,560;UBERON:0006598,1.22e-16,560;UBERON:0010317,1.22e-16,560;UBERON:0002532,1.22e-16,560;UBERON:0004119,5.04e-11,160;UBERON:0000925,5.04e-11,160;UBERON:0006595,5.04e-11,160;UBERON:0001007,1.19e-09,145;UBERON:0001555,1.19e-09,145;UBERON:0007026,1.19e-09,145;UBERON:0000483,7.80e-09,306;UBERON:0000119,1.91e-08,309;UBERON:0004921,2.47e-08,118;UBERON:0002100,3.53e-08,199;UBERON:0003104,9.66e-08,160;UBERON:0009142,9.66e-08,160;UBERON:0005177,1.99e-07,101;UBERON:0009569,7.00e-07,112 | |||
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| |||
|short_description=p1@ACSS2 | |||
}} |
Latest revision as of 18:33, 15 September 2015
Short description: | p1@ACSS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACSS2_5end |
Coexpression cluster: | C2185_mature_Adipocyte_Hepatocyte_skin_liver_skeletal_left |
Association with transcript: | 0bp_to_ENST00000253382, ENST00000467019_5end |
EntrezGene: | ACSS2 |
HGNC: | 15814 |
UniProt: | Q5QPH3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.74e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.74e-08 | 42 |
defensive cell | 5.87e-08 | 48 |
phagocyte | 5.87e-08 | 48 |
macrophage dendritic cell progenitor | 3.42e-07 | 61 |
monopoietic cell | 3.75e-07 | 59 |
monocyte | 3.75e-07 | 59 |
monoblast | 3.75e-07 | 59 |
promonocyte | 3.75e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
embryo | 1.47e-19 | 592 |
developing anatomical structure | 1.53e-19 | 581 |
embryonic structure | 5.00e-17 | 564 |
germ layer | 1.22e-16 | 560 |
germ layer / neural crest | 1.22e-16 | 560 |
embryonic tissue | 1.22e-16 | 560 |
presumptive structure | 1.22e-16 | 560 |
germ layer / neural crest derived structure | 1.22e-16 | 560 |
epiblast (generic) | 1.22e-16 | 560 |
endoderm-derived structure | 5.04e-11 | 160 |
endoderm | 5.04e-11 | 160 |
presumptive endoderm | 5.04e-11 | 160 |
digestive system | 1.19e-09 | 145 |
digestive tract | 1.19e-09 | 145 |
primitive gut | 1.19e-09 | 145 |
epithelium | 7.80e-09 | 306 |
cell layer | 1.91e-08 | 309 |
subdivision of digestive tract | 2.47e-08 | 118 |
trunk | 3.53e-08 | 199 |
mesenchyme | 9.66e-08 | 160 |
entire embryonic mesenchyme | 9.66e-08 | 160 |
trunk region element | 1.99e-07 | 101 |
subdivision of trunk | 7.00e-07 | 112 |