FFCP PHASE1:Hg19::chr20:45318051..45318118,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112858 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16197 | |||
|TSSclassifier=strong | |||
|UniProt=Q5JZ02 | |||
|association_with_transcript=0bp_to_ENST00000372102,uc002xsj.2_5end | |||
|cluster_id=chr20:45318051..45318118,- | |||
|description=CAGE_peak_1_at_TP53RK_5end | |||
|id=chr20:45318051..45318118,- | |||
|ontology_enrichment_celltype=CL:0002321!3.28e-28!248;CL:0000220!1.17e-27!246;CL:0000055!1.71e-25!180;CL:0000548!3.84e-19!679;CL:0000004!3.84e-19!679;CL:0000255!3.84e-19!679;CL:0000012!3.23e-18!682;CL:0000144!5.28e-16!625;CL:0000066!4.34e-14!254;CL:0000222!8.80e-13!119;CL:0000183!2.28e-12!59;CL:0000393!3.23e-12!60;CL:0000211!3.23e-12!60;CL:0002371!1.51e-11!591;CL:0000187!1.83e-10!54;CL:0000680!2.02e-10!57;CL:0000056!2.02e-10!57;CL:0000355!2.02e-10!57;CL:0000221!6.01e-10!71;CL:0000192!3.23e-09!42;CL:0000514!3.23e-09!42;CL:0000133!5.10e-08!59;CL:0000359!4.65e-07!32;CL:0000057!7.04e-07!75;CL:0002077!8.36e-07!33;CL:0000003!8.53e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000192;4.97e-07;43!CL:0000393;6.22e-07;61!CL:0000211;6.22e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.89e-29,250;CL:0000066,8.01e-14,253;CL:0000222,3.34e-13,121;CL:0000393,1.56e-12,61;CL:0000211,1.56e-12,61;CL:0000187,8.98e-11,55;CL:0000680,9.98e-11,58;CL:0000056,9.98e-11,58;CL:0000355,9.98e-11,58;CL:0000221,1.47e-09,72;CL:0000192,1.58e-09,43;CL:0000514,1.58e-09,43;CL:0000133,5.09e-08,59;CL:0000359,4.64e-07,32;CL:0002076,6.98e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000514;4.97e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!2.35e-11!216;UBERON:0000475!2.57e-11!365;UBERON:0000486!3.65e-11!82;UBERON:0005256!4.47e-11!143;UBERON:0000481!2.14e-10!347;UBERON:0000914!2.89e-10!83;UBERON:0002329!2.89e-10!83;UBERON:0003077!2.89e-10!83;UBERON:0003059!2.89e-10!83;UBERON:0007282!2.89e-10!83;UBERON:0009618!2.89e-10!83;UBERON:0007285!2.89e-10!83;UBERON:0000468!3.26e-10!659;UBERON:0000119!5.00e-10!312;UBERON:0004290!6.07e-10!70;UBERON:0000483!1.44e-09!309;UBERON:0000922!1.73e-09!612;UBERON:0000923!4.53e-09!604;UBERON:0005291!4.53e-09!604;UBERON:0006598!4.53e-09!604;UBERON:0002532!4.53e-09!604;UBERON:0002050!6.58e-09!605;UBERON:0005423!6.58e-09!605;UBERON:0001134!8.26e-09!61;UBERON:0002036!8.26e-09!61;UBERON:0003082!8.26e-09!61;UBERON:0003104!1.86e-08!238;UBERON:0009142!1.86e-08!238;UBERON:0002385!4.04e-08!63;UBERON:0001015!4.04e-08!63;UBERON:0000383!4.04e-08!63;UBERON:0000490!1.59e-07!138;UBERON:0000467!7.61e-07!625 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,6.29e-12,78;UBERON:0000486,1.87e-11,83;UBERON:0002100,2.04e-11,199;UBERON:0003104,7.29e-11,160;UBERON:0009142,7.29e-11,160;UBERON:0007524,3.09e-10,73;UBERON:0002329,3.12e-10,71;UBERON:0003059,3.12e-10,71;UBERON:0007282,3.12e-10,71;UBERON:0004290,3.12e-10,71;UBERON:0009618,3.12e-10,71;UBERON:0003077,4.82e-10,72;UBERON:0007285,4.82e-10,72;UBERON:0000119,1.12e-09,309;UBERON:0000483,3.16e-09,306;UBERON:0005256,4.18e-09,122;UBERON:0001134,4.28e-09,62;UBERON:0002036,4.28e-09,62;UBERON:0003082,4.28e-09,62;UBERON:0000490,8.24e-09,148;UBERON:0002385,2.14e-08,64;UBERON:0001015,2.14e-08,64;UBERON:0000383,2.14e-08,64;UBERON:0000922,6.93e-08,592;UBERON:0005423,3.09e-07,581 | |||
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| |||
|short_description=p1@TP53RK | |||
}} |
Latest revision as of 15:11, 16 September 2015
Short description: | p1@TP53RK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TP53RK_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000372102, uc002xsj.2_5end |
EntrezGene: | TP53RK |
HGNC: | 16197 |
UniProt: | Q5JZ02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.89e-29 | 250 |
epithelial cell | 8.01e-14 | 253 |
mesodermal cell | 3.34e-13 | 121 |
electrically responsive cell | 1.56e-12 | 61 |
electrically active cell | 1.56e-12 | 61 |
muscle cell | 8.98e-11 | 55 |
muscle precursor cell | 9.98e-11 | 58 |
myoblast | 9.98e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.98e-11 | 58 |
ectodermal cell | 1.47e-09 | 72 |
smooth muscle cell | 1.58e-09 | 43 |
smooth muscle myoblast | 1.58e-09 | 43 |
neurectodermal cell | 5.09e-08 | 59 |
vascular associated smooth muscle cell | 4.64e-07 | 32 |
endo-epithelial cell | 6.98e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 6.29e-12 | 78 |
multilaminar epithelium | 1.87e-11 | 83 |
trunk | 2.04e-11 | 199 |
mesenchyme | 7.29e-11 | 160 |
entire embryonic mesenchyme | 7.29e-11 | 160 |
dense mesenchyme tissue | 3.09e-10 | 73 |
somite | 3.12e-10 | 71 |
presomitic mesoderm | 3.12e-10 | 71 |
presumptive segmental plate | 3.12e-10 | 71 |
dermomyotome | 3.12e-10 | 71 |
trunk paraxial mesoderm | 3.12e-10 | 71 |
paraxial mesoderm | 4.82e-10 | 72 |
presumptive paraxial mesoderm | 4.82e-10 | 72 |
cell layer | 1.12e-09 | 309 |
epithelium | 3.16e-09 | 306 |
trunk mesenchyme | 4.18e-09 | 122 |
skeletal muscle tissue | 4.28e-09 | 62 |
striated muscle tissue | 4.28e-09 | 62 |
myotome | 4.28e-09 | 62 |
unilaminar epithelium | 8.24e-09 | 148 |
muscle tissue | 2.14e-08 | 64 |
musculature | 2.14e-08 | 64 |
musculature of body | 2.14e-08 | 64 |
embryo | 6.93e-08 | 592 |
developing anatomical structure | 3.09e-07 | 581 |